Leptospira kmetyi: EFP84_09835
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Entry
EFP84_09835 CDS
T05705
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lkm
Leptospira kmetyi
Pathway
lkm03030
DNA replication
lkm03430
Mismatch repair
lkm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EFP84_09835
03430 Mismatch repair
EFP84_09835
03440 Homologous recombination
EFP84_09835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lkm03032
]
EFP84_09835
03400 DNA repair and recombination proteins [BR:
lkm03400
]
EFP84_09835
Enzymes [BR:
lkm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EFP84_09835
DNA replication proteins [BR:
lkm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EFP84_09835
DNA repair and recombination proteins [BR:
lkm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EFP84_09835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AYV55781
UniProt:
A0A2M9XNR6
LinkDB
All DBs
Position
1:2097276..2100794
Genome browser
AA seq
1172 aa
AA seq
DB search
MQDFAHLHLHTNYSMLDGAIRIKELMQHVKECGMSSVAMTDHGNMFGAVEFYNEAMKQGI
KPIIGSEFYVSPNRKQETEMVKIADGNAYHLILLAKNEEGYKNLIRLSSKSYTEGFYKKA
RIDYDLLDKHSDGLVCLTACLAGEVNRKILEGKIDESFQLAGKLNEIFRKEDFYMEIQNH
GIPEQMTVAKQIYDFGKRTGIPLVVTNDSHFLKKTDQEAQDILLRIGMQKRITDPMEFGF
NGEFYVKNREEMSRLFPEIPEALDNTLEISNKVNLKLQFGNYLLPEFEVPEGYDADSYLE
KLIWEGIERKYPSLSPEVKDRVVFELNTIKNMKFAGYFLIVQDYINYAKRNGIPVGPGRG
SAAGSIVAYALGITNVEPLQHNLLFERFLNPDRKDMPDIDTDFCVERREEVINYIRRRYG
EERVGQIITFNSLAAKAALKDVARVLNLPFGEANEMTKAFPNKLGMSIAEALTTSSELKN
FSEKDDINHKIFAIAQRLEGNYRQPGRHAAGVVISPYPLEEVVPLSTVAEKERPGFRSIV
TQYDKNNLESIGLIKMDILGLKNLTTLDYAIKLIEQRRGIRINLDEISYEDSNTYALLRK
ANTLGIFQLESTGITDLVAKSQVNNFDEIVALIALYRPGPMGEGMLDEYLDRKSGKKQVT
YPVSSCEPILKETFGVPVYQEQVMSISRVVGGFSVGDSDMLRKAMAKKKADMMEKLKVQF
VEGAVKLGHQEKVAKDLFEQLERFGGYGFNKSHSVAYAIITYQTAYLKANYTIEYLTALL
ASDHGKTTDIVKYINNAREMGIRILNPDVTESQASFSVIDDTTIRFGLSAMKGVGETAAN
SIIQARSKVGNFKTLQDFAINIDTRLINKKVFEALIQAGALDSFGYTRKCLFESVDSILT
FAQKEQERANEGQFSLFGGAEGSFTLNLPKDALEWEIDEKLKREKMVAGLYLSGHPLDKY
EKQLKSLKTIPIEKFDDLKSGSKVEVAGVIASKNIKLSKRNEEFANFKLEDRTGEIECVA
FSKVYQKFKEFIKEDQAIFIKGDLDKIEVGDAELRGQIKVNSIEILDDTTIEDKLEKSLH
LRLEERHTEDPELIPKLYALLACYKGESSVYFHIVENQEEKRVIRAHDAYSIQPINELFF
RLADLLGDRSVFYSVGEQLKAINKNQVAGNVG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatttcgcccacctacatctgcacacgaattactccatgctcgacggagcgatc
cgtatcaaagaattgatgcaacacgtcaaggaatgcggcatgtcttcggtcgcgatgacc
gatcacggaaacatgttcggagccgttgaattttacaacgaggcgatgaaacagggcatc
aagccgattatcggaagcgaattctacgtttctccgaacagaaaacaggaaacggagatg
gtaaagatcgcggacggaaacgcgtatcatctcatccttctcgcaaagaacgaagaaggt
tacaaaaatctaatacgtctttccagcaaatcctataccgaaggtttttataaaaaggcg
agaatcgactacgatcttctcgacaaacacagcgacggtcttgtctgtttaacggcttgt
ctcgcaggagaggtgaaccgaaaaattctcgaaggaaaaatcgacgaatcgtttcaactc
gccggtaaactgaacgaaattttccgtaaggaagatttctatatggaaatccaaaaccac
ggaatccccgaacagatgaccgtggcgaaacaaatctacgacttcggaaaaagaaccgga
attcctctcgtggtcacgaacgattctcactttttaaaaaagaccgaccaagaagcgcag
gacattcttctaagaatcggaatgcaaaaacgcatcaccgatccgatggaattcggattc
aacggagaattctacgttaaaaatcgggaggaaatgtcccggctttttcccgaaattccg
gaagccctcgataatacattagaaatcagtaataaagtaaatttgaaacttcaattcgga
aattatctccttcccgagttcgaagttcccgaaggatacgacgcggattcttatcttgaa
aaacttatctgggaaggaatcgaaagaaaatatccgagtctttctcccgaagtaaaagac
cgagtcgtgttcgaactcaacacgatcaagaatatgaagttcgccggttactttttaatc
gttcaggattatatcaactacgcaaaaagaaacggaattccggtcggtccgggaagaggt
tcggccgcgggttcgatcgtcgcatacgcgctcggaatcacgaacgtggaacctctgcaa
cacaaccttcttttcgagagattcttaaatcccgatcgtaaggacatgcccgatatcgat
acggatttctgcgtggaacgccgcgaagaagtgatcaattatatccgcagacgatacggc
gaagaacgcgtaggacagatcatcacgttcaattctctcgcggccaaagcggctctcaaa
gacgttgcgcgcgttttgaatcttccgttcggcgaagcgaacgaaatgacaaaagcgttt
ccgaacaaactcggtatgtccatcgccgaagcgctcacaacttcttcggagttgaaaaac
ttttccgaaaaagacgatatcaatcataagatttttgcgatcgcacaaagactcgaagga
aactatcgacagccgggaagacacgcggccggcgtcgtgatttctccgtatcctttggaa
gaagtagttcctctttcaacggtcgccgaaaaagaaagacccggttttagatccatcgta
acccaatacgacaagaacaacttggaaagtatcggattgatcaagatggatatcttgggt
ttgaaaaacttaacgaccctggattacgcgatcaaattgatcgaacaaagacggggaatt
cgaatcaatctcgacgagatttcgtacgaggattcgaacacgtatgctctattaagaaaa
gcgaatacgttgggcatcttccagcttgaatccaccggaatcacggatcttgtcgccaaa
agtcaggtgaataacttcgacgagatcgtcgcattgatcgccttgtatcgtcccggtccg
atgggagaagggatgttggacgaatacttggatcgtaagtccggtaaaaaacaagtcaca
tatcccgtttcttcctgcgagccaatcttaaaggaaaccttcggagttcccgtttatcag
gaacaggtgatgagtatttcccgcgttgtcggaggattttccgtcggagattccgacatg
ttgcgaaaagcgatggctaagaaaaaagccgacatgatggaaaaactgaaagttcagttc
gtggaaggcgcagtcaaactcggacatcaggaaaaagttgctaaggatctgttcgaacag
ttggaacgattcggcggttacggattcaacaaatcgcactcggtcgcatacgcgatcatc
acgtatcaaaccgcgtatctcaaagcgaattatacgatcgaatatctgaccgcgttactc
gcatcggatcacggtaaaaccaccgatatcgtaaagtatatcaacaacgcgagggagatg
ggaattcgaattctcaacccggacgttaccgaatctcaggcttcgttcagcgtgatcgac
gacacgacgattcgtttcggtctttccgcgatgaaaggcgttggtgaaaccgcagcaaac
agcatcattcaagcgagaagcaaggtcggcaactttaagactttgcaggacttcgcaata
aatatcgacacgagattaatcaacaaaaaagttttcgaagcgttgattcaagcgggagcc
ttggattctttcggttatactcggaaatgtctttttgaatcggtggattccattcttacc
ttcgctcaaaaggaacaggaaagagccaacgaaggacagttctctttgttcggcggcgcg
gaaggttcgttcacgctcaatcttccgaaagacgcactcgaatgggaaatcgacgaaaaa
ctcaaacgcgaaaagatggttgcaggtctttatctttccggtcatccgctcgacaaatac
gagaaacaactcaaaagtctcaagacgattccgatcgaaaaattcgacgatttgaaatcg
ggaagtaaggttgaagtcgccggagtcatcgcttccaagaacatcaaactcagcaaacga
aacgaagaattcgcgaacttcaaactcgaagatcgaaccggagaaatcgaatgtgtcgcg
ttctcgaaagtatatcagaaatttaaggaattcatcaaggaagaccaagcgatctttatc
aaaggagatttggataagatcgaagtcggagacgcggaactccgcggacaaatcaaagta
aacagcatcgaaattttggatgatacgacgatcgaagacaaactcgaaaaatcgcttcat
cttcgtctggaagaaagacataccgaagatcccgaactgattccgaaactgtacgcgtta
ctcgcttgttacaagggagaatcttcggtttactttcacatcgtggaaaatcaggaggaa
aaaagagtgatccgcgcgcacgacgcgtattcgatccaaccgatcaacgaactctttttt
agattggccgatcttttaggagatcgttccgttttctattctgtgggcgaacaactcaaa
gcgatcaataaaaatcaagtcgcgggcaacgtcggctaa
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