Leptospira kmetyi: EFP84_12245
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Entry
EFP84_12245 CDS
T05705
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lkm
Leptospira kmetyi
Pathway
lkm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lkm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EFP84_12245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkm03019
]
EFP84_12245
03009 Ribosome biogenesis [BR:
lkm03009
]
EFP84_12245
Enzymes [BR:
lkm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EFP84_12245
Messenger RNA biogenesis [BR:
lkm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EFP84_12245
Ribosome biogenesis [BR:
lkm03009
]
Prokaryotic type
rRNA helicases
EFP84_12245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
CMS1
P-loop_SecA
Cas3-like_C_2
AAA_22
MtrA
Motif
Other DBs
NCBI-ProteinID:
AYV56203
UniProt:
A0AAD0UU05
LinkDB
All DBs
Position
1:complement(2588482..2590065)
Genome browser
AA seq
527 aa
AA seq
DB search
MKKLKFNELNLSTEIQNAIAEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAI
PTIELLEVESKHLQALILCPTRELVIQVSEQFRKLMKYKGNFEVVPVYGGQEIDRQLRAL
RKNPQIVIATPGRMMDHMRRGSIRLEDIKIVILDEADEMLDMGFREDMEFILKDTPADRQ
TIMFSATMTDDILTLMKRFQKNPQIIDVTHQKLSAPKIEQIYYEIQENAKGEALARLIEY
RNVKLALVFCNTKAQVDTVVELLKSRGYFAEALHGDLNQKQRDKVMNGFRNGSIEILVAT
DVAGRGIDVNNVEAVFNYDLPRDGEDYVHRIGRTGRAGKKGIAFSFIVGKQIYNLKKIER
INGIKIELGKIPTLDDLEETKIHSYTEKVRSIVDAGHIGNYVNQVEKLMGDDYTALDIAA
ALFKMTILKDSVTFDDSVKFESDFKYDDRNPSKKKSGGGGRYRDRNFGRSGGGGGGSRSK
SNSGGGSGSHSGSGARSHGGSQGGSGSKFSKGDKKTGGASSFKKKKK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactcaagtttaatgaactaaacttatccaccgagatccaaaacgcgatcgcg
gaaatgggctttgaagaagcctctcccattcaatcggaagcgattcccgtcatcctgaaa
ggaaaagacatcatcggtcacgcgcaaaccggaacgggtaaaaccgccgcgttcgccatt
ccaacgatagaacttctcgaagttgaaagcaaacatctacaagcgctgatcctctgtcca
acgcgcgaactcgtgattcaagtcagcgaacaattccgtaaactgatgaaatacaaggga
aacttcgaagtggttcccgtttacggcggacaggaaatcgacagacaattaagagcgctt
cgtaagaatcctcagatcgtaatcgcgactccgggaagaatgatggaccacatgagaaga
ggttccatccgtctcgaagacatcaagatcgtaatactcgacgaagccgacgaaatgttg
gacatgggtttcagagaggatatggaattcattctcaaagacacaccggcggatcgtcag
acgatcatgttctcggcgacgatgaccgacgacattctcaccttgatgaaacggtttcaa
aaaaatcctcaaatcatcgacgtaactcatcaaaaactcagcgctcctaaaatcgaacag
atctattacgaaatccaggagaacgcgaagggagaagctctcgcgcgtttgatcgagtac
agaaacgtaaaactcgcattagttttttgtaatacgaaagcccaggtcgacacggtcgtg
gagcttttgaaatcgagaggatatttcgcggaagcgcttcacggagatctcaatcaaaaa
caaagagataaggtgatgaacggatttagaaacggaagtatcgaaatcctagtggctacc
gacgttgcgggaagaggaatcgacgtaaacaacgtggaagcggtgttcaactacgatctt
ccgagagacggagaagactacgttcaccggatcggaagaaccggaagagccggaaaaaaa
ggaatcgcattctcctttatcgtcggaaaacaaatttacaacctcaaaaagatcgaacgt
atcaacggaatcaaaatcgaactcggaaaaattccaacgttagacgatctcgaagaaact
aaaattcattcttataccgagaaagtaagatccatcgtagacgcgggtcatatcggaaac
tacgttaaccaagttgaaaaactgatgggtgacgattataccgctcttgatatcgcggcg
gctttgtttaagatgacgattctcaaagacagcgtcaccttcgacgattccgttaagttc
gaatccgattttaaatacgatgatagaaatccttccaaaaagaaatccgggggcggtgga
agatacagagatcgtaacttcggaagatccggaggcggcggcggtggttcaagatccaag
tccaattcgggcggtggatcgggttctcattcgggcagcggcgctcgttcgcacggagga
tctcaaggcggctcgggttccaaattctccaaaggggataaaaaaaccggcggagcttct
tccttcaaaaaaaagaagaagtaa
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