Leptospira kmetyi: EFP84_14310
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Entry
EFP84_14310 CDS
T05705
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lkm
Leptospira kmetyi
Pathway
lkm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EFP84_14310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lkm03400
]
EFP84_14310
Enzymes [BR:
lkm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EFP84_14310
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EFP84_14310
DNA repair and recombination proteins [BR:
lkm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EFP84_14310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
HVO_2718
Auto_anti-p27
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
AYV56557
UniProt:
A0AAD0XQQ7
LinkDB
All DBs
Position
1:complement(3037069..3037890)
Genome browser
AA seq
273 aa
AA seq
DB search
MPELPDLVVIRERLIPELVGKTVQLIEIVDPLVVRNLTGSAVEEIYSGSSFQSVERNGPF
LNFAFENLNIVIHPMLSGRFSLDPKYKKKDLCVRILTNGPVLNYADDTRMGKVYFLKPDD
IGQIPKYKEQGINLLSDEFTEESLIRAMGKSRQQTRVFLMDQSKLSALGNAYADEVLFAA
KIHPKTPCNQLSPEDKSLLYKSIKEVLSSSIEYVRNKHAPLDVKVRDHVKVRNRKNEPCP
VCGTTIRRANVLGYDSFFCPTCQPAKGEQFIKW
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactgccggacttagtggtcattcgggaacggttgatccccgaactcgtgggc
aaaaccgttcaattgatcgaaatcgtggatcctttagttgtccgcaatctcaccggatcg
gccgtggaagagatttattccggttcttcgtttcaatccgtggaaagaaacggacccttt
ctgaatttcgcattcgaaaatttgaatatagtaattcatcctatgttgtcgggtcgattt
tccctggatccgaagtataagaaaaaagatctctgtgttcgcattcttacgaacggtccc
gttttaaattacgcggacgacacgaggatgggaaaagtttattttctgaaaccggatgac
atcggccaaattcccaaatacaaggaacaagggatcaatcttctttcggatgaattcacc
gaagaaagtctgatccgtgcgatgggaaaaagccgtcagcaaaccagagtttttttaatg
gatcaatccaagctcagcgcattaggaaacgcttatgcggacgaggttttgttcgcggcg
aagattcatccgaaaactccctgcaatcaactttctccggaagataaatcccttttatac
aaaagcatcaaagaggttctttcgagttcgatcgaatacgtccgcaacaaacacgcgcct
ctggacgtaaaggttcgcgatcacgtaaaggtgagaaatcgaaaaaacgaaccctgcccc
gtttgtggaacgacgatccgaagagcgaacgtcttagggtatgattctttcttttgtccg
acttgccaaccggccaaaggcgaacagttcatcaagtggtga
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