Leptospira kmetyi: EFP84_14385
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Entry
EFP84_14385 CDS
T05705
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lkm
Leptospira kmetyi
Pathway
lkm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lkm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EFP84_14385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkm03019
]
EFP84_14385
03400 DNA repair and recombination proteins [BR:
lkm03400
]
EFP84_14385
Enzymes [BR:
lkm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EFP84_14385
Messenger RNA biogenesis [BR:
lkm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EFP84_14385
DNA repair and recombination proteins [BR:
lkm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EFP84_14385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RQC
RecQ_Zn_bind
Cas3-like_C_2
ResIII
PsbR
Motif
Other DBs
NCBI-ProteinID:
AYV56569
UniProt:
A0A5F1Y1Z8
LinkDB
All DBs
Position
1:complement(3055853..3057733)
Genome browser
AA seq
626 aa
AA seq
DB search
MNSPQNNHIQNLESSLKEIWGMSRFRIGQREAIESVLGGKDTLVILPTGGGKSLIYQLPA
AIDSSSLTLVISPLIALMKDQVDSLKAKGISAEYCNSTQDDLEQLRILSRAATGKIRILY
LSPEKALSRQVFEILPKLPLGRIAVDEAHCVSQWGHDFRPEYRKLYELRDKFPKFVPIIA
LTATATSRVIQDISDSLGLKEPALVKGSFFRENLNFSIRFPQNETSRESELLKLLIQGNF
QKIASGRAIIYCATRQKVESVYEFLKKNGFKVGKYHAGRTDSSREKTQDGYSAGKTNVLV
ATNAFGMGLDSPDVRLVVHYQSPASLESYYQEAGRAGRDGKSSSCVLFYHPSDLVTQSFI
IGKESNRKGGETLLSFVKEYAVSNRCRQQILCSYFGEEISTCQSCDICLEKESPRSFVES
GRDQFLKREEDKRQKKEEKEKYDFSNEELNFIENVLEQIPGKFGKRMIAGVLRGSRSNEI
LRKKLDRLEHYGSLKFVSEEAILKVLDDWISEKKVKIVGDKYPKLILASTVVVKTQRKKK
DPNEQTEGEKKSIPAKNAIQELKNYRDREARRRKWKKFMVLQNPVIVQIAKVMPETPEDL
SLIKGMGSAKVEKFGNDILRILDKWR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaccgcagaacaatcacattcaaaatttagaatcttctctcaaagaaatttgg
ggaatgtcccgatttcgaatcggccaaagagaagccatcgaatccgttctcggaggaaaa
gacacgttagtcattcttcccaccggcggcggcaaatcattgatctatcagttacccgcg
gcgatcgattcttcctctttgacgctcgtgatttctcctttgatcgcgctcatgaaggac
caagtcgattctctcaaagcgaagggaatctccgccgagtattgcaactcgactcaggac
gatctcgaacaacttagaattctaagtagagccgcaaccggtaaaatcagaatcttatat
ctttcacccgaaaaagcgttgagtcgtcaggtgttcgaaattcttcctaaacttcccttg
gggagaatcgcagtggacgaagcgcattgtgtttcccaatggggtcacgacttccgaccc
gaatatcgcaaactctacgaacttcgggataaatttcccaagttcgttccgatcatcgcg
ttaaccgccaccgcgacgtctcgagtcatccaagacatatccgattctctcggattgaaa
gagcccgcgctcgtcaaaggaagtttctttcgcgagaatctaaacttctcgatccggttt
ccgcaaaacgaaacttccagagaaagcgaactcttaaaacttttgattcaaggaaacttt
caaaaaatcgcaagcggaagagcgatcatctattgtgcgacccgtcaaaaggtcgaatcg
gtttacgaatttctaaagaagaacggattcaaggtcggaaagtatcacgcgggaagaacc
gattcaagccgggaaaaaacgcaggacggttacagcgccggaaaaacgaacgtgcttgtc
gcgacgaacgcgttcggaatgggactcgacagcccggacgttcgattggtcgttcactat
caatcgcccgcgtctttggaaagttattatcaggaagccggacgcgcaggacgagacgga
aagtcttcgagttgtgttcttttttatcatccttccgacttggtcactcaaagttttatc
atcggcaaggaaagcaatcgtaagggcggagaaacgcttctttcattcgtaaaagaatac
gcggtctccaatcgatgcagacaacaaattctttgttcttatttcggagaggaaatttcc
acctgtcaatcctgcgacatttgtttggaaaaagaatcccctcgttctttcgtcgaaagc
ggaagggaccaattcttaaaacgagaagaggataaaagacaaaagaaggaagaaaaagaa
aaatacgatttttcaaacgaagaattgaacttcatcgaaaacgttctcgaacagattccg
ggcaagttcggaaaaagaatgatcgccggagtattaagaggttcccgctccaacgagatt
cttagaaaaaaattggatcgattggaacattacggttctttaaagtttgtttcggaagag
gcgatcttaaaggtcctcgacgattggatctccgaaaagaaggtgaaaatcgttggagat
aaatatccgaaactgattttggcttcgaccgtcgtcgtaaaaactcagcgcaaaaaaaag
gatccgaacgaacaaaccgaaggcgaaaaaaaatccattcccgcaaaaaacgcgattcaa
gaactgaagaattatcgggaccgagaagccagacgcagaaagtggaaaaaatttatggtg
cttcaaaatccggtgatcgttcaaatcgcaaaggtcatgcccgaaactcctgaggatctt
tccctcatcaaaggaatgggttcggccaaggtcgaaaaattcggaaacgatatcttaaga
attttagataagtggagatga
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