Leptospira kmetyi: EFP84_17190
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Entry
EFP84_17190 CDS
T05705
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lkm
Leptospira kmetyi
Pathway
lkm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lkm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EFP84_17190 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkm03019
]
EFP84_17190 (pnp)
03016 Transfer RNA biogenesis [BR:
lkm03016
]
EFP84_17190 (pnp)
Enzymes [BR:
lkm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EFP84_17190 (pnp)
Messenger RNA biogenesis [BR:
lkm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EFP84_17190 (pnp)
Transfer RNA biogenesis [BR:
lkm03016
]
Prokaryotic type
tRNA degradation factors
EFP84_17190 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
TAtT
S1_2
Motif
Other DBs
NCBI-ProteinID:
AYV57069
UniProt:
A0A2M9XVE2
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All DBs
Position
1:3653371..3655470
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AA seq
699 aa
AA seq
DB search
MTHTISGQFGRDTIVLETGNWAKQAHGAVVYKSGNLVLLATVCAADDAKEGQDFFPLTCE
YTEKLYSVGRFPGGYFKREAKPPEHEILISRIIDRPIRPLFPEGYFCEVQLQVQVLSADG
DVSVAGHALNAASAALAVSDIPFNGPIAGARIGRINGELILNPTTKEIVNSDLDLVVAGT
KTHIVMIEGEAKELSNEEMLAALRFAQKYIAEFVTLQEEYAKKIGVVKREVKLRTRDAEL
LAKVKEYAFAKLTAANQTPDKTSRNKEISNVNKEVVEYFKQTVEESDKIKDIKAYLHELE
YEIVREQVLTQGTRFDGRKLDEIRPISVEVNPLPGPHGSSVFTRGQTQSLGVVTLGTGSD
NQRYETLEGQKEKSFMLHYNFPAFSVGEVRRSSGPGRREIGHGNLAERALKLVLPSADEF
PYVIRVVSEILESNGSSSMASVCSGSLALMAAGVPIKGSVSGIAMGLFSDSSGKFAVLSD
IAGLEDHFGDMDCKIAGTRKGITAFQMDLKVTGVSFDVLESVFAQAQKGRFHILDIMEKH
ISKASETLAGTAPRIIVRNIPKDRIGELIGPGGKNVRGISELTGAELYIEDDGRVTISGS
NQESAEKAAKMVDGFFTEVEVGKIYEGKVKRIADFGAFVEILPGKEGLCHISKIDFKRVN
SVKDIVKEGDIIRVKVLNVDKTGKIDLSRKDALEEEQQA
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgacacatacaatctccggccagttcggccgcgatactatcgttttagaaaccggcaac
tgggcgaaacaagcgcacggtgccgtcgtttataaatccggaaatttagttctgcttgct
acggtttgtgcggctgacgacgcgaaagaggggcaggactttttccctcttacttgcgaa
tataccgagaaactttattccgtcggtcgttttcccggcggttacttcaagagagaagcc
aaacctcccgagcacgaaattctcatttccagaatcatagacagaccgatccgtcctttg
tttccggaaggatatttctgcgaagttcaacttcaagtgcaggttctttctgcggatgga
gacgtttccgttgcgggtcacgctttgaatgcggcgagtgccgcattagcggtttctgat
attccgttcaacggtccgatcgcgggcgcaaggatcggaagaatcaacggagaattgatc
ctcaacccgaccacgaaagaaatcgtaaattccgatttggacctcgtggttgccggaaca
aaaactcatatcgtaatgatcgagggagaagcgaaagaactctccaacgaggaaatgctc
gcggctcttcgtttcgctcaaaaatacatcgcggagttcgtaactcttcaggaagaatac
gcaaaaaaaatcggcgtagtcaaaagagaagtaaaactgagaacacgcgacgcggaactt
cttgcaaaggtgaaagaatacgctttcgcaaaattgaccgcagccaatcaaactcccgat
aaaacttcccgtaataaggaaatctccaacgtaaacaaagaagtcgtagaatacttcaaa
caaaccgttgaagaatcggataagatcaaggacatcaaagcatatcttcacgaattggaa
tacgaaatcgttcgcgaacaggttttgactcaaggaactcgtttcgacggaagaaagtta
gacgaaatccgtccgatctccgtggaagtaaatcctcttccgggtcctcacggttcttcc
gtttttacaagaggtcaaacccagtctttgggagtcgtaactcttggaacgggttcggac
aatcaaagatacgaaaccctcgaaggacaaaaagaaaagtcctttatgcttcattataac
tttcccgcgttttccgtgggcgaggttcgcagatcttccggtccgggaagaagagaaatc
ggccacggtaatctcgcagaacgcgcgttaaagctcgttcttccgagtgcggacgaattt
ccctacgtgatccgagtcgtttctgaaatcttagaatcgaacggttccagctccatggct
tccgtttgttccggttctctcgcgctgatggcggcgggcgttccgattaagggaagcgtt
tccggaatcgcgatgggtcttttctccgattcttccggcaagttcgcggttctttccgat
atcgcgggtctcgaagaccacttcggagatatggattgcaagatcgccggaaccagaaaa
ggaatcaccgcgttccaaatggacttgaaagtgaccggagtgagtttcgacgttctcgaa
agcgttttcgctcaggctcaaaagggaagattccatattctcgatattatggagaaacat
atctccaaggcgtccgagacgttagccggaaccgctccgagaatcatcgtaagaaatatt
cctaaggatagaatcggcgagttgatcggaccgggcggtaaaaacgttcgcggtatcagc
gaacttaccggcgcggaactttatatcgaagacgacgggcgcgtaaccatttccggttcg
aaccaagagtccgccgaaaaagccgcgaagatggtcgacggattctttaccgaagtggaa
gtcggaaaaatctacgaaggaaaagtaaaacgaatcgccgacttcggcgcgtttgtcgaa
attcttcccggaaaagaaggtctttgtcacatctccaagatcgacttcaaacgagtgaac
tcggtgaaagacatcgtaaaagaaggcgatatcatccgcgttaaagttttaaacgtggac
aagaccggaaaaatcgatctttccagaaaagacgcactcgaagaagaacaacaggcataa
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