Leuconostoc koreense: FGL74_01250
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Entry
FGL74_01250 CDS
T10571
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lkn Leuconostoc koreense
Brite
KEGG Orthology (KO) [BR:
lkn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FGL74_01250 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lkn03021
]
FGL74_01250 (rpoD)
Transcription machinery [BR:
lkn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FGL74_01250 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
QEA59824
LinkDB
All DBs
Position
complement(233799..234911)
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AA seq
370 aa
AA seq
DB search
MKNPEYDKATKALITEYKAAKQITYAALSKRLAEPFNLDEENIERLMEKVEDAGIAIVDD
NGDPAPEVLKAKQNKPTDQELAEAEETPAGIKINDPVRMYLKEIGRVNLLKGNEEIDIAK
RIENGDIEAKQELAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYTKGFK
FSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPLPEEIGAE
MDLTADKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDNEAVSPADSAAYEMLREQLES
VLDTLTDREENVLRLRFGLEDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLRHPSRSKQ
LKDFMDESTN
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaatcctgagtacgacaaggcaactaaagctttaattactgagtataaagcagca
aaacaaataacatatgcagcattatcgaagcgtttggcggaaccttttaacctagacgaa
gaaaacattgaacgtctgatggaaaaagtcgaagatgccggtattgcaattgttgatgac
aatggtgatccagcaccagaagtattaaaggccaaacaaaacaaacccactgatcaagag
ttagcagaagccgaggaaacgccagctggtatcaaaattaatgatccagttcgcatgtac
cttaaagaaattggccgtgttaacttattgaagggaaatgaagaaatcgatattgccaag
cgtattgaaaatggtgatatcgaagccaagcaagagttagcagaagccaatttacgattg
gttgtctcaattgctaagcgctatgttgggcgtggcatgcaattcttggacttaatccaa
gaaggaaatatgggcttaatgaaagccgtagataaattcgactataccaaaggctttaag
ttctcaacgtatgccacatggtggattcgtcaggccatcacacgtgccatagctgatcaa
gcgcgtacgattcgtattccagtccacatggttgaaacaattaataagctgattcgtata
cagcgtcaattgttacaagatttgggacgtgaacctcttccagaagaaatcggtgcggaa
atggatttgacggccgacaaagtgcgtgaaatcttaaaaattgctcaagagccagtatct
cttgaaactcctattggtgaagaggatgattctcatttgggtgatttcatcgaagataat
gaggcagtttctccagctgactctgcagcgtatgaaatgctcagagaacaattggaatct
gttttggatacattgactgaccgagaagaaaatgttttgcgtttacgtttcggattagaa
gacggacgtacgcgtacattggaagaagtcggtcgtgtatttggtgtaacacgtgaacgt
attcgtcagattgaagcgaaagcattacgcaagttacgtcatccaagtcgttcaaagcaa
ctgaaagatttcatggatgagagtacaaattaa
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