Leuconostoc koreense: FGL74_06765
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Entry
FGL74_06765 CDS
T10571
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lkn Leuconostoc koreense
Brite
KEGG Orthology (KO) [BR:
lkn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lkn03009
]
FGL74_06765 (rlmD)
Enzymes [BR:
lkn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FGL74_06765 (rlmD)
Ribosome biogenesis [BR:
lkn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FGL74_06765 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
Methyltransf_15
MTS
Methyltransf_31
RrnaAD
TRM5-TYW2_MTfase
TRAM
Methyltransf_25
PrmA
DOT1
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
QEA59413
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All DBs
Position
1313202..1314593
Genome browser
AA seq
463 aa
AA seq
DB search
MYEVKIIARTILPVKLNQELTAVIDDIRIDGMGIFYVTSEYPLYVADALPGEKVHLLVTQ
VDKFSGYAKVLNRLESSDKRQNSDRQYLIDAGTAPLVNLKYDAQLELKQAQVKRLFEKQH
IDVSVDRTIGMDNPTYYRNKTIVPVKWQNNHLTSGFYKRGTHDLVPMDDYFVNDAKIDQA
IIVIRNILEKYDITAFDPDLEHGAIRYIMIRRGYYSHELMVVLVSNEEVISHETEIINDI
RSQLTELKSLILNYSPKKDYVLLSPNNRTLWGEKAIYDTLLGYKFIIGPNSFYQVNPQTT
EVLYDLAAQKADLKPTDTVIDAYSGIGTIGISVASRVKKVLGVEVVPGAVADAQFNLQAN
NITNAEYILADAPVQFKKWQEQGLKPDIVFVDPPRRGLTTSLIQATTDMSPQKIVYISCN
PVTLSRDAVEIIENGYHIDGSVLPVDQFPQTSHVESITVFRKD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggtgaaaattatcgcacgcacaattttaccagtaaaattaaatcaagagttg
acagctgttattgatgatattcgaatcgatggtatgggtattttttatgttacatcagag
tatccactgtatgttgctgatgcactaccaggagagaaagttcatttactggtaacccaa
gtagacaaattttctggctatgctaaagttcttaatcgactggaaagttcagataaacga
caaaatagtgatcgacaatatttgattgatgccggtacagcaccactagtgaatctaaaa
tatgatgcacaacttgaactaaaacaagcccaggtgaagagactttttgaaaagcagcat
attgatgtgtcagttgatcgaacaattgggatggacaatccaacatactatcgtaataag
actattgtccctgtaaaatggcaaaataatcatctgaccagtgggttttacaaaagaggg
acacatgatttagtacccatggatgactattttgttaatgatgcaaaaattgaccaagca
attattgtgattagaaatattttggagaagtatgatatcacggcatttgatcctgattta
gaacatggtgccattcgttatataatgatacgccgtggctattattctcatgaattaatg
gttgtattagtttcaaatgaagaagtcatttcgcacgaaacagaaattattaatgatatc
agaagtcaactgacagaattaaaaagcttaattttgaattatagtcctaaaaaagactat
gttttattaagtccaaataatcgaacactatggggtgaaaaagccatttatgatacttta
cttggatataagttcattattggtcctaattcgttttatcaagttaatccgcaaaccacc
gaagttctatatgatttagctgcccaaaaagctgatttgaagccgacagacactgttatt
gatgcttattcaggtataggaacaattggcattagcgttgctagtcgggttaaaaaagta
cttggcgttgaggttgttcccggtgcagttgctgatgcacagtttaatttacaagccaac
aatattactaatgctgaatatattttggctgatgcacctgtgcaatttaaaaaatggcaa
gaacaaggactgaaaccagatattgttttcgtggatccgccaagacgtggcttaacgact
tctctcattcaagccacaaccgacatgtcaccccaaaagatagtatatattagctgcaat
ccagtaactttgagtcgcgatgccgttgaaattattgaaaatggttatcatattgatggt
tcggtcttaccagtagatcaattcccacagacctctcacgtcgaaagtattacagtgttc
cgaaaggattaa
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