Levilactobacillus koreensis: ABN16_00655
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Entry
ABN16_00655 CDS
T03995
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lko
Levilactobacillus koreensis
Brite
KEGG Orthology (KO) [BR:
lko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lko03019
]
ABN16_00655
03009 Ribosome biogenesis [BR:
lko03009
]
ABN16_00655
Enzymes [BR:
lko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ABN16_00655
Messenger RNA biogenesis [BR:
lko03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABN16_00655
Ribosome biogenesis [BR:
lko03009
]
Prokaryotic type
rRNA helicases
ABN16_00655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AKP63647
UniProt:
A0AAC8UTP8
LinkDB
All DBs
Position
complement(119922..121280)
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AA seq
452 aa
AA seq
DB search
MTADFKEFKLQPYLMTALHKIGFTTPTKVQEKLIPVIAAGKDVVGQSQTGSGKTHTFLLP
IFNQLTSENQVQAVITTPSRELAYQIHTAAEQLAAESPFEIRIGNYVGGTDKQRQINKLR
HYQPQLIIGTPGRVLDLIQSQALDVHTTRQFVVDEADMTLDLGFLDQVDKIAGRMPKDLQ
MMVFSATIPQRLDPFLKKYMNHPVIEEIPSATIISDTIDNWLISTKGQNKNQLIYQLITM
GEPYLVLIFANTKTRVEQIHDFLQAQGMKVAMIHGGIKPRERKRVMREVKNLQFQFVVAT
DLAARGIDIEGVSHVINDDIPEDLDFFVHRVGRTGRQGMHGTAITLYSPGEEAKIAEIEA
MGIKFQPKRISNNEIVDSYDRNRRTQRRKSTEKLDPTLIGFVMKKKRKIKPGYKHQIKQE
IHRKKDQERRIAQRQDARNERKRRKRESDRYQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagattttaaagagtttaagttgcagccgtacttaatgacggccctgcacaag
attgggttcacgacacccaccaaggttcaagaaaaattgattcccgtgattgctgcgggg
aaggatgttgtcggccaatcccaaactgggagcgggaagacgcatacgtttttactgccc
atctttaaccagttaacgtcagaaaaccaggttcaggccgtcatcaccacgccgagccgg
gaactggcttaccagattcataccgccgctgaacagttggccgctgaatcaccatttgag
attcgaattggaaactacgttgggggtaccgacaagcaacgccaaatcaacaagttgcgg
cactatcaaccccaactgatcatcgggacaccaggtcgggtcttggacttgattcaatca
caagcgctggacgtgcataccacccggcagttcgtggtcgatgaagccgacatgaccttg
gacttagggttcttagatcaagtcgataagattgctgggcggatgcctaaagacctccaa
atgatggtcttctccgcaacgattccacaacggctcgatccgttcttgaagaagtacatg
aaccatcccgttatcgaagaaattccgtccgcgacgatcatctcggacaccattgataac
tggttgatctcaactaagggtcaaaacaagaaccagttgatctaccaattgatcacgatg
ggggaaccctacctggtcctgatttttgccaacaccaagacgcgggtcgaacagattcac
gacttcttgcaggcacaaggtatgaaagttgccatgattcacgggggcatcaagccgcgt
gaacggaaacgagtcatgcgcgaagtgaagaacctccagttccaatttgtcgtggcaacc
gatctggctgcgcggggaattgatatcgaaggggtctcccacgtcattaacgatgatatt
cctgaagacctcgacttcttcgttcaccgagtggggcggacgggtcgtcaagggatgcac
ggaacggcgatcaccctgtactcaccgggtgaagaggccaagattgctgagatcgaagcg
atgggcattaagttccagcctaagcggatcagcaacaatgaaatcgtcgactcctatgac
cggaaccgccggactcaacggcggaagagtaccgaaaagcttgacccaacgctgattggt
ttcgttatgaagaagaagcgcaaaatcaagccagggtacaagcaccaaatcaagcaagaa
attcaccggaaaaaggatcaagaacggcgaattgcccaacgtcaagatgctcgtaatgag
cgaaagcggcggaagcgtgagtcagaccgttaccaataa
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