Levilactobacillus koreensis: ABN16_09825
Help
Entry
ABN16_09825 CDS
T03995
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lko
Levilactobacillus koreensis
Pathway
lko03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lko00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABN16_09825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lko03021
]
ABN16_09825
03400 DNA repair and recombination proteins [BR:
lko03400
]
ABN16_09825
Enzymes [BR:
lko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABN16_09825
Transcription machinery [BR:
lko03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABN16_09825
DNA repair and recombination proteins [BR:
lko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABN16_09825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AKP65269
UniProt:
A0AAC8UXE6
LinkDB
All DBs
Position
2199417..2203064
Genome browser
AA seq
1215 aa
AA seq
DB search
MVDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWEC
ACGKYKRIRYKGVVCDRCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVLDPGNTPLEKKQLLSERDYRDKLIEYGSSAFKAEMGAEAIKKLL
MAVDLDKEVKELKEELKEATGQKRTRAVRRLDILEAFVTSGNRPEWMVMDAIPVIPPDLR
PMVQLEGGRFATSDLNDLYRRVINRNSRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPSLKFNQMGLPV
PMALELFRPFIMKELVARGLASNIKNAKRQIDREDDDVFNVLEDVIKEHPVLLNRAPTLH
RLGIQAFEPVLVSGKAMRLHPLACEAYNADFDGDQMAIHVPLSDEAQAEARLLMLAAHHI
LAPASGKPVVAPSQDMVIGNYYLTMEEDNREGEGMIFTDLNEAVLAYRNGLVHWHSRVGV
QVSSMPDKPFTDDQRTKIMVTTVGKLIFNNILPKSFPYLNEPTSTNLNGYVPDKYFLAPG
EDIHDYLQNAELIGPFKKGFLSDIIAAVYQQYKVTATSKLLDRIKDLGYDESTKSGLTVG
MVDVTDLKEKPEIIDEAHKQVATVTKQFRRGLITDHERYERVIGIWNDAKDDIQNALIHS
FDQQNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGEIMELPITSNFREGLTVMEMFIS
THGARKGMTDTALKTANSGYLTRRLVDVAQDVIIREKDCGTDRGLKIRAITDGNEMIEPL
YDRILGRYTQKTVYDPKTGDVIVPKNQMIVEDTAQKIVDAGVEEVTIRSAFTCNTEHGVC
EHCYGRNMATGDEVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGNEDITQGLPRVQE
LFESRNPKGKAEITEVTGTVESIEENPAERTKEITIKGEADTRSYTLPITARMRVTEGDF
IHRGSALNYGSVDPKEMLRVRDVLSTETYILGEVQRVYRMQGVAISDKHVEIMVRQMLRK
VRIMDPGDTDVLPGTLMDIQDFRRANYQTLIDGGIAATARPVILGITKAALETNSFLSAA
SFQETTRVLTDAAIRGKNDPLVGLKENVIIGKIIPAGTGMPDYRQIKPKEVGGSSTEGVY
SISDLEKQMQEDSQA
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
ttggtcgatgtcaataagttcgaaagcatgcagatcgggcttgcctcgcctgataagatc
cgtagctggtcttacggggaagtcaaaaagcctgaaaccatcaactaccggacattaaag
cctgaaaaagacgggctattcgacgagcggatttttggccctactaaggactgggaatgt
gcctgtgggaaatacaagcgaatccgttacaagggtgtcgtttgtgaccgttgtggggtt
gaagttacccgttctaaggttcgtcgtgaacggatgggccatatcgaattggctgctcct
gttactcacatctggtacttcaagggtatcccaagtcggatgggcttagtcctcgacatg
agtccccgggcgttggaagaaattatttacttcgcttcctacgttgtcttagatccaggt
aacacgccactcgaaaagaagcaattactttccgaacgtgattaccgtgacaagctgatc
gaatacggcagcagtgcctttaaggctgaaatgggtgccgaagccatcaagaagttgttg
atggccgtggacctagataaagaagttaaggaattaaaggaagaattgaaggaagctact
ggccaaaagcggacgcgtgccgttcgtcgtttggacatcttggaagccttcgttacatct
ggtaaccgtccggagtggatggtcatggatgctattccggtaatcccacctgatcttcgt
ccaatggtacaactcgaaggtggtcgtttcgcaacgtccgacctgaacgacttgtaccgg
cgggttatcaaccggaacagccggttgaagcgtttgctggacttaaatgcgcctggtatt
atcgttcaaaacgaaaagcggatgttacaagaagccgttgacgccttgatcgataacggt
cgtcgtggccgtccagtggctggtcctggtaaccgtccattgaagtctctttcacacatg
ttgaaagggaagcaagggcggttccggcaaaacttgttagggaagcgggttgactactct
ggtcgttccgttattgacgttggtccttccctcaagttcaaccaaatgggtctgccagtt
ccaatggctttggaattattccggccatttatcatgaaggaattggttgctcgcgggtta
gcttctaacattaagaacgctaagcgccaaatcgaccgtgaagatgacgatgtctttaac
gttttggaagacgtcatcaaggaacaccctgtgctgttgaaccgggcccctacgcttcac
cgtttggggattcaagcgttcgaacctgtcttggttagtggtaaggcaatgcggcttcac
ccattggcttgtgaagcttacaatgccgatttcgatggggaccaaatggccatccacgtt
ccattatctgacgaagcacaagctgaagcacgtctgctgatgctggctgctcaccacatt
ttggctcctgccagtggtaagccagttgttgcgccttcacaagatatggttatcgggaac
tactacctgacgatggaagaagacaatcgtgaaggggaaggcatgatctttaccgacctc
aacgaagctgttctggcttaccggaatggtttagttcactggcacagtcgggtcggtgtt
caagtgtcttcgatgcctgataagccatttacggatgatcaacgcacgaagattatggtc
acgaccgttgggaagttgattttcaacaacatcctgccaaagtcgttcccatacttgaac
gaaccaactagcacgaacctgaacggctacgtccctgacaagtacttcttggcaccgggc
gaagacattcacgattacctgcaaaatgctgaattgatcggtccatttaagaagggcttc
ttgtccgatattattgcggccgtttaccaacaatacaaggtaacggcaacgtcgaagttg
cttgaccggatcaaggacttaggttatgacgaatcaactaagtccggtctgaccgttggg
atggtcgatgtgactgacttgaaagaaaagccagaaatcatcgacgaagcccacaagcag
gttgctacggttaccaagcagttccgtcgtggtctgattaccgatcatgaacgttacgaa
cgcgttattggaatctggaacgatgccaaggacgacattcaaaacgccttgattcacagt
ttcgatcaacagaaccctatctttatgatgagtgattctggtgctcgtgggaacatttct
aactttacgcaacttgccgggatgcgtggtctgatggccgctcctaacggtgaaatcatg
gagctgccgatcacgtctaacttccgtgaaggcctgacggttatggaaatgttcatttcg
acccatggtgctcgtaaagggatgaccgatacggccctcaagactgccaactcaggttac
ctgactcggcggctggtcgatgttgcgcaagacgttatcattcgggaaaaggattgtggg
actgaccgtggtttgaagattcgtgccatcactgatggtaatgaaatgattgaaccattg
tacgaccggatcttagggcgttacacccaaaagaccgtctacgatccaaagactggggac
gttattgttcctaagaaccaaatgatcgtcgaagacaccgcacaaaagatcgttgatgct
ggtgttgaagaagttactattcgttccgcctttacttgcaacactgaacatggtgtttgt
gagcattgttacggccggaacatggctactggtgacgaagttgaagttggtgaagctgtc
gggactgttgccgcgcaatctatcggtgaaccagggacccagttgaccatgcgtaacttc
cataccggtggtgttgccgggaacgaagatatcacccaagggcttcctcgtgttcaagaa
ttatttgaatctcggaaccctaaaggtaaagctgaaattaccgaagttactgggacggtt
gaatcaatcgaagaaaacccagcagaacggacgaaggaaattaccattaagggtgaagct
gatacgcggagttacacgttaccaatcactgcccgcatgcgggtcactgaaggcgacttt
atccaccgtggttctgcattgaactatgggtctgttgatcctaaggaaatgctgcgggtt
cgcgatgtcttatcaactgaaacttacatcttaggtgaagttcaacgggtttaccggatg
caaggtgttgcgatcagtgataagcacgtggaaatcatggttcggcaaatgttgcgtaag
gttcggatcatggatccgggcgataccgacgttctgcctggtaccttgatggatatccaa
gacttccgtcgtgccaactaccagacgttgatcgatggtggcattgctgctaccgcacgt
ccagttatcttggggatcaccaaggctgctttggaaacgaacagtttcttatcagccgca
tccttccaggaaacgacgcgtgtcttgaccgatgctgctattcggggcaagaacgatcca
ctggttggtttgaaggaaaacgttattattgggaagattattcctgccgggactgggatg
ccagattaccgtcagatcaagcccaaagaagtcggtggctcatcgaccgaaggcgtctac
tccatcagcgatttggaaaagcaaatgcaagaagactctcaagcttag
DBGET
integrated database retrieval system
