Levilactobacillus koreensis: ABN16_10030
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Entry
ABN16_10030 CDS
T03995
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lko
Levilactobacillus koreensis
Brite
KEGG Orthology (KO) [BR:
lko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lko03016
]
ABN16_10030
Enzymes [BR:
lko01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ABN16_10030
Transfer RNA biogenesis [BR:
lko03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABN16_10030
Prokaryotic type
ABN16_10030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AKP65308
UniProt:
A0AAC8ZGW4
LinkDB
All DBs
Position
2229358..2230155
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AA seq
265 aa
AA seq
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MQRYKVTFMYDGTDFAGFQRQPNKRTVESVLTKVVNKMAKNPTPAIVIYGSGRTDAGVHA
LAQVAHFDFPFLIPAENMRKGLNSMLPMDMEVLKVEEVAADFHARYDVSGKRYLYRMDMG
EFRNPFKRNYTGHWKFPVDLKKINVALQDLVGEHDYTSFVASGAQTRTFVRTIYEATCHI
DEANHELVFEFYGNGFMYNQVRIMVGVLVEIGAGTRPVHDILRLYEVKDRRQARRTVAAA
GLYLKHVYYQGEDPEHPTKLPQHQR
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgttacaaggtaacttttatgtatgatggaaccgactttgccggcttccagcgc
caacccaacaagcggacggtggagagcgtcttgaccaaagtcgtcaataaaatggcgaag
aacccgacgcccgccatcgtcatctacggctcggggcggaccgacgcaggggtccatgcc
ttagcgcaggtggcccacttcgactttcccttcctgattcccgcggagaacatgcgcaag
ggcttaaacagcatgttaccgatggatatggaggtcttgaaggtcgaggaggtcgctgcc
gactttcatgcacggtatgacgtgtccggcaagcgctacctgtaccggatggatatgggc
gaattccgcaatccgttcaagcgcaactatacggggcattggaaatttccagtcgacctg
aaaaaaatcaacgtggctctacaagacttagtgggggaacacgattacacgagttttgta
gcatccggcgcgcagacgcggacgttcgtgcggaccatctacgaagccacctgccatatt
gatgaagcaaaccacgagttggtctttgaattttacggtaacggtttcatgtacaaccag
gtccgtatcatggttggtgtgctggttgaaatcggggctggcacccgaccagttcatgat
attttacgactgtacgaggttaaggatcggcggcaggccagaagaacggtcgcggcggcg
ggcttatatctcaaacacgtctattatcagggggaggaccccgaacacccgacgaaatta
ccccaacatcagcggtaa
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