KEGG   Levilactobacillus koreensis: ABN16_11625
Entry
ABN16_11625       CDS       T03995                                 
Name
(GenBank) Zn-dependent hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
lko  Levilactobacillus koreensis
Pathway
lko03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lko00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABN16_11625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lko03019]
    ABN16_11625
Messenger RNA biogenesis [BR:lko03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ABN16_11625
SSDB
Motif
Pfam: RNase_J_C RNase_J_b_CASP Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AKP65580
UniProt: A0AAC8ZH25
LinkDB
Position
2579346..2581211
AA seq 621 aa
MSAKIKIIPFGGVRENGKNMYAVDVNGGIYILDCGLKYPENELLGIDVVIPDWAYLRENK
DRIVAVFLTHGHADAIGALPYFLSEFNVPVFGSEMTIALAKIDVAAEPKVKDYDDFHVID
EKTEIDFGDVVVSFFSTTHSIPESLGIDLKTDEGQIIYTGDFKFDQTAKPGYQTDYARLG
AIGQAGVLAVLSDSANAENPAMNASEQTIAESIEETFHYRDGRVVVACVASNILRIQQVF
DAAAKTGRKVCLTGQDLEAIVNTAMKLGKLSFDDDLLVTTAQLDQLSPAEIVILQTGKMG
EPIKAIQRMANKQEKDLNIQEGDLVYITTTPSHAMDTTVAQTRDMIYRAGGEVKAISDEL
NSSGHAYKRDLQLMLNLLKPKYLVPIQGEYRLLNAHANAAMELGMAADHIFILAKGDVLT
YANGEMGLGEGIDVSDTMIDGIGVGDIGNIVLRDRKVLADDGIFIAVVTIDRKKKQIVAD
PKITSRGFVYVKANKDLMQESAQIIRKAVQNNLDNKEFDWGHLKQDVREHLSHYLFEQTH
RRPVILPVIMEVNQHHRRTTGKEKTPANQATPAKAKAPKAPKSKDKPAPKKDVADKSAHK
AHRNRKRRRTPKPATTETDKA
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgagtgcaaagatcaagattattccgtttggcggtgttcgcgaaaacggtaaaaacatg
tacgccgttgatgttaacggtggaatttatattttagattgtgggttgaagtacccggaa
aatgagttgttgggaattgacgttgtcattccagattgggcttatttgcgtgagaataag
gaccgaattgttgcggtcttcttaacccatgggcatgccgatgcaattggggcactccct
tactttttgagtgagttcaacgtccccgtattcggttcagaaatgacgattgctttagcg
aaaattgacgttgctgccgaacctaaggtgaaggattacgatgacttccacgtgatcgat
gaaaagacggaaatcgacttcggtgacgtggtggtttccttcttctctacgacccactca
attccagaatcactggggatcgacttaaaaactgatgaaggccaaattatttataccgga
gacttcaagtttgaccaaacggctaagcccggctaccagaccgactatgcgcggttaggc
gccattggtcaggcgggtgtcttggcggtattgagtgattccgctaacgctgaaaatcca
gcgatgaatgcttcagagcaaaccattgcggaatccatcgaagaaacgttccactaccgt
gatggacgggtcgttgtcgcctgtgtggcctcgaatattttgcggattcaacaagtcttt
gacgccgcagcgaagaccggacgaaaggtttgcttgacgggacaggatctcgaagccatt
gtgaacacggccatgaagctgggaaagttgtcctttgacgacgatcttttggttaccaca
gcgcaattagaccaattgtcaccagccgaaatcgtcattttacagacgggtaagatgggt
gaacccatcaaggcaattcagcggatggctaacaagcaagaaaaagacttaaacattcag
gagggtgacctggtctacatcaccacgacgccttcacatgccatggacaccacggttgcc
cagacgcgggacatgatctaccgggccggtggggaagttaaggccatttctgatgaactg
aattcatcaggccacgcctacaagcgtgaccttcagttaatgctgaacctgctgaaaccc
aagtatttagtacctattcaaggggaataccggctattaaatgcccatgcgaatgcggcc
atggaattaggcatggccgctgaccacatctttatcttggccaagggggatgttttgacc
tatgccaatggtgagatgggactcggcgaaggtatcgacgttagcgacaccatgatcgac
ggtatcggtgtcggtgatattgggaacatcgtgttgcgcgatcggaaggttttggccgac
gacgggatctttattgccgtggtgacgatcgaccggaagaagaaacagattgtagcggac
cctaagatcacatcacgaggctttgtctacgttaaggccaacaaggacttgatgcaggag
agtgctcagattattcgcaaggccgtccaaaacaacctggacaataaggaatttgattgg
ggtcacttgaagcaggatgtgcgtgaacatttgagccattacctgtttgaacaaacccac
agacgtccagttatcctgccagtcatcatggaggttaaccagcatcatcgtcggacgacg
ggtaaggaaaagacgccggctaaccaagcgacaccagctaaggccaaggcccctaaggca
ccaaagtcgaaggataagccagcgccaaagaaagatgtagcggataagtcggcccataag
gcccatcgtaaccggaaacggcggcggacgcctaaaccagcgaccactgaaacggataaa
gcataa

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