Levilactobacillus koreensis: ABN16_11930
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Entry
ABN16_11930 CDS
T03995
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lko
Levilactobacillus koreensis
Pathway
lko03030
DNA replication
lko03430
Mismatch repair
lko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABN16_11930 (polC)
03430 Mismatch repair
ABN16_11930 (polC)
03440 Homologous recombination
ABN16_11930 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lko03032
]
ABN16_11930 (polC)
03400 DNA repair and recombination proteins [BR:
lko03400
]
ABN16_11930 (polC)
Enzymes [BR:
lko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABN16_11930 (polC)
DNA replication proteins [BR:
lko03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABN16_11930 (polC)
DNA repair and recombination proteins [BR:
lko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABN16_11930 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
RNase_T
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
tRNA_anti-codon
HHH_6
HHH_3
DEDDh_C
RNase_H_2
HlyD_3
Motif
Other DBs
NCBI-ProteinID:
AKP65637
UniProt:
A0AAC8ZHI2
LinkDB
All DBs
Position
2638484..2642821
Genome browser
AA seq
1445 aa
AA seq
DB search
MDEDRHALFEKLLQQLDLTSAAEKPYFQTAKIDHLTVHEQSRRWHFYLNVPSILPFTAFA
EFQNHLQMAFREIATVENTFLIAEPELTNRALGDYWQWVVKNSGLTSNLIQELCQSQVPE
LDPDGRVLLYAQNEVVKDFLSNQALGPIEDTYRNAGFPKFNIHVMIDESKSQAKIDEFKA
RQEKTDAQLAQQAAAAIEKANQKRQSQGDTPAAEGPTQIGKTIKGDQPIMRMADIVQEER
SVIVEGYVFDKEVRKLRSGRQLLTIKITDYTSSIVVKKFSRGAEDEAQFAGVTEGSWVKV
RGSVQEDSFMRDLALNAYDINEVKHASRQDTAPADEKRVELHLHTTMSQMDATNPIEDYV
KQAKKWGMPALAITDHADVQGFPAAFNSSAKAGIKMLYGVEANLVDDGVPIGYNSAHVPL
DGATYVVFDVETTGLSAIYDKVIELSAVKMQHKNVIDQFEEFIDPGFPLSEQTTNLTSIT
DDMVAGSKSEEEVFKLFREFCGDAIIVGHNVTFDVGFMNTGYQRHGMAEISNPIIDTLTL
ARFLYPTLKSYRLNTLAKRFHVSLEHHHRAVYDAESTGHLNYLFLKDAEDRYDIQYHDQL
NDHMTDNDAYKHARPNHAILIAKTQAGLKNMFKLVSASNVDYYYRVPRVPRSVLDHYREG
IIVGSACSSGEVFTAMMQKGQVEAAAKAKYYDYLEVQPKAAYQPLIDSGLIADEANLEEI
VGNMVKLGHDLNKPVVATGDVHYLNPEDYIYRKILIHSQGGANPLNRQELPDVHFLTTNE
MLADFSYLGEDVAKEIVVTNTQKIANDVDEVHPLKDKLYTPRMEGAEDEIRQRTMDTAHA
WYGDPLPELVQHRVDRELKSIIGNGFSVIYLIAQRLVAKSNKDGYLVGSRGSVGSSVVAT
FTGITEVNPLPPHYRCPNCQYSHFYTKGEYSSGYDLPEKNCPKCGTLMIGDGHNIPFETF
LGFKGNKVPDIDLNFSGDYQPIAHNYTKVLFGEKNVYRAGTIGTVADKTAYGYVKAYERD
TEQTFRGAEIDRLAKGATGVKRTTGQHPAGIIVVPDYMEIYDFTPIQYPADDQTAAWQTT
HFDFHSIHDNILKIDILGHDDPTMIRTLQDLSGVDPQTIPMDDPGVMALFSGTDSLGVTP
EQIQSKTGTLGVPEFGTRFVRGMLEETHPKNYSQLLQISGLSHGTDVWLGNAEELIKAGT
ATIANVIGCRDNIMTDLINFGLDSETSFQVMEHVRKGRGIPDEWQEKMKQTDCPDWYIDS
CLKIKYMFPRAHAAAYVLMALRVAYFKVYFPIIYYAAYFSVRADDFDVVAMSQGKTAVKA
AMKAINDQGMDASTKDKNLLTVLELANEMLERGFKFKMIDLNRSDAADWIIDGDTLIAPF
QAAPGLGLNVAKQIVAARNDRPFISKEDLAKRGKVSKTIIDFMTENGVLTGLPDENQLSL
FDDMM
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaagatcgccatgctttatttgaaaagctcttacaacaattagatttaaccagt
gcggccgagaaaccgtactttcagacggccaagattgaccatttgacggttcatgaacaa
tcacgacggtggcatttttatttgaacgtgcccagcattctgccgtttacggcctttgcg
gaatttcaaaatcacctgcaaatggcctttcgggagattgcgacggtggaaaataccttt
ttgatcgccgaaccggagctcacgaatcgcgccttaggggactattggcaatgggtcgtc
aagaacagcgggttgaccagtaacttgattcaggagctgtgccaatcccaggtgccggaa
ctagatccggacgggcgggtccttttatatgcgcaaaatgaggtcgtcaaggacttcttg
agcaatcaggcgttggggccaattgaggatacctaccgtaatgctggttttcctaagttc
aacattcacgtcatgatcgatgaatcgaagtcacaggctaagatcgacgagttcaaggcg
cgtcaggaaaagacggacgcccagctcgcgcaacaagccgcagcggccatcgaaaaggcc
aaccagaaacggcagagccagggcgatacgccggctgccgagggaccaacgcagattggg
aagaccattaagggtgaccaaccgatcatgcggatggcagacattgtccaagaggagcgt
tctgtcatcgttgagggctacgtctttgacaaggaagtgcggaagttacggtcagggcgg
caactgttgaccattaagatcaccgactacacgtcatcgatcgtggtcaagaaattctcc
aggggcgccgaagatgaagctcaatttgccggggttaccgagggaagttgggtcaaggtt
cgcgggagcgtccaagaggatagcttcatgcgtgatctggcattgaacgcttatgatatc
aacgaagttaagcatgccagtcgacaagacacggcgccagccgacgagaaacgggtggaa
ctacatctacacacgaccatgagtcagatggatgcgactaaccccattgaagattacgtg
aagcaggctaaaaaatggggcatgcccgccttggcaattacggaccatgccgatgtgcaa
gggttccctgcggcctttaattcgtccgctaaggccggtattaagatgctctacggggtt
gaagccaacttagtggatgatggggtgcctatcgggtataacagcgcacatgtcccgtta
gacggtgccacgtacgttgtctttgacgtggaaaccactgggctgtctgccatttatgat
aaagtcatcgaactctcagccgtcaagatgcagcacaagaacgtcatcgaccagttcgaa
gagtttatcgatccggggttcccactgtccgagcagaccacgaatctgaccagtatcacc
gatgatatggttgcggggtcgaagtcggaagaagaggtcttcaagctcttccgggaattc
tgtggtgacgcgataatcgttggacataacgtcacgtttgacgtggggttcatgaatacc
gggtatcaacggcacggcatggctgagatcagtaatccaatcatcgataccttaacgttg
gcacggttcctgtacccaacgttgaagagttaccggttgaataccttggccaagcggttc
cacgtgagcttggagcaccatcaccgggccgtttatgatgcagagtcgacgggacacctg
aactatctgttcttgaaggatgccgaagaccgctatgacattcagtaccatgaccagttg
aacgatcacatgactgataatgacgcgtataagcatgcgcgaccaaaccatgccatcctc
attgccaagacgcaagcgggcttgaagaacatgttcaagttggtctcagcgtccaacgtg
gactactactaccgggtaccacgagtgccacggagcgtgctcgaccactaccgcgagggg
attatcgtcggctctgcctgttcctcaggcgaagtcttcacggcgatgatgcaaaagggg
caagtggaggcggctgctaaggccaagtactacgattatctcgaagtacaacccaaggcg
gcctaccagccgctgatcgattccggattgatcgccgatgaagcgaacttggaagagatc
gtcggcaacatggtgaaactcggacatgacttgaataagccggtcgtggctactggggac
gtgcactatttgaatcctgaggactacatttaccggaagatcctgattcattcgcaaggt
ggggccaatccactgaaccgacaggaactaccggacgtgcacttcttgacgaccaatgaa
atgctagcggacttctcctatttgggtgaagacgtggctaaggaaatcgttgtgaccaac
acgcagaagattgcgaacgatgtcgacgaggtccatccgttgaaggacaagctgtatacg
ccacgcatggagggtgccgaggatgaaattcggcaacggaccatggatacggcgcatgct
tggtacggtgatccgttaccagagctggtccaacaccgagtcgaccgggaattaaagtcg
attattgggaacgggttctccgtgatttatttgatcgcccaacggctagtagccaagtcc
aacaaggatgggtacttagttggatcacgggggtctgtcgggtccagtgttgtggcgacg
tttaccggaatcaccgaagttaacccgttgccgccgcattaccggtgtcctaattgtcag
tactcgcacttctataccaaaggggaatacagttcgggatacgatttacccgaaaagaac
tgcccgaagtgtgggacgctgatgattggcgacgggcacaacattccgttcgaaaccttc
ttagggttcaaaggaaacaaggtccccgatattgatttgaacttctccggggactaccaa
cccatcgcgcataactataccaaagtcttgttcggtgagaagaacgtttaccgggccgga
acgattggaacggttgctgacaagaccgcctatgggtacgtgaaggcgtacgagcgcgat
acggagcagactttccgtggcgccgagatcgaccgcttagccaagggcgcgaccggtgtc
aaacggacgacgggacaacatcccgcggggatcatcgttgtgccggattacatggaaatc
tacgacttcacgccgatccagtatccagccgatgatcagactgccgcttggcaaacgacc
cactttgatttccattcgatccatgataatattttgaaaattgatattctgggacatgat
gatcccacgatgatccggaccctgcaagatttgtcgggggtcgatccgcagacgattcca
atggatgaccctggtgtcatggcgttgttctccgggacggattcactgggtgtcacgccg
gaacagattcagtccaagaccgggacgttaggtgtgccggaatttgggacacgatttgtg
cgggggatgttggaagaaacgcacccgaagaactactcgcaactccttcaaatttctggc
ctatcccacgggactgatgtgtggttgggaaacgccgaagagttaatcaaggcgggaacc
gcgaccattgccaacgtgattgggtgtcgggataacatcatgaccgacttgatcaacttc
ggcctcgattccgaaacgtccttccaagtcatggaacacgtgcggaagggtcgtgggatt
cctgacgaatggcaagagaaaatgaagcaaacggactgcccggactggtacattgattct
tgtctgaagatcaagtacatgttcccgcgggcccatgcggccgcctacgtcttgatggcg
ttgcgggtggcttacttcaaggtctatttcccaatcatttactacgccgcttacttctct
gtgcgggccgatgactttgacgttgtggctatgtcacaaggaaagacggcggtgaaggcc
gccatgaaggcaatcaacgaccagggtatggatgcgtcgacgaaggacaagaacctgttg
acggtgttagagttggccaacgaaatgctcgaacggggcttcaagtttaagatgatcgac
ttgaatcgttccgatgctgccgattggatcattgatggcgacacgttgattgcaccattc
caagccgcacctggactgggattgaacgttgctaagcaaatcgtggccgctagaaatgac
cggccgtttatctcgaaagaggacttggctaagcggggcaaggtttccaagacgattatt
gatttcatgacggaaaacggtgttctgactggtttgccagatgaaaaccagttgagtctg
tttgacgatatgatgtaa
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integrated database retrieval system
