Levilactobacillus koreensis: ABN16_12160
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Entry
ABN16_12160 CDS
T03995
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lko
Levilactobacillus koreensis
Pathway
lko03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABN16_12160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lko03400
]
ABN16_12160
Enzymes [BR:
lko01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
ABN16_12160
DNA repair and recombination proteins [BR:
lko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ABN16_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AKP65680
UniProt:
A0AAC8UYD3
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All DBs
Position
2688023..2688952
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AA seq
309 aa
AA seq
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MAEFLIGSHVSMKGKDMLLGSAQEAASFGENVFMIYTGAPQNTRRKPIDELNIEAGKAFM
AAHDQRAVVVHAPYVVNLGNTVKPQNYGFAVEFLTAEVQRAAALGATQIVLHPGAHVGAG
APAAIAQIAKGLDEILSAAQAPVQIALETMAGKGTEVGRTFEELAAIMDATAANDRLSVC
FDTCHTSDAGYAIADDFDGVLNEFDHVIGIDKLKVIHLNDSKNPQGSHKDRHTNIGLGTL
GFDVLNKVAHHPQLTTVPKIMETPVIGPDRKHGVNPHGYEVAMLKAQKFNPDLEADVLAE
KPVDEFLTR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatttttaatcggctcacacgttagtatgaagggcaaggacatgctgctgggc
tcggcgcaagaagccgccagctttggcgagaatgtcttcatgatctatacgggcgccccg
cagaacacgcgccgcaagccaatcgacgagctaaatattgaggcgggcaaggcgtttatg
gccgctcacgaccaacgcgccgttgtggttcacgcaccgtacgtggtcaatttaggaaat
acggtgaagccccaaaattatggctttgccgtggaattcctgacggcggaggtccagcgg
gcggcggcactgggagcaacgcagatcgttctccatccgggcgctcacgttggtgctggg
gcaccggcagccatcgcacagattgccaagggcctcgacgagattttaagtgccgcacaa
gcccccgtccaaatcgccttagagacgatggcgggtaagggcaccgaggttggccggacg
tttgaggaattggcggcaatcatggatgccacggcggccaatgatcggctgtccgtctgt
tttgacacctgccacaccagcgatgccgggtatgcgatcgccgatgatttcgatggggta
ctcaatgagttcgaccacgttatcggcattgataagctgaaggtgattcacctgaacgat
tcgaagaacccccagggcagtcataaggaccgacacacgaatattggtctgggaacgctg
ggcttcgatgtgttgaacaaagtggcgcatcatccccaactcacgacggtacctaagatt
atggaaacgccggtgattgggccggaccggaagcacggcgttaatccacacggctatgaa
gtggccatgctgaaggcccagaagtttaatccggatttagaggccgatgtgttggcggag
aagccggttgacgaatttttaacgcggtaa
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