Levilactobacillus koreensis: ABN16_12255
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Entry
ABN16_12255 CDS
T03995
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lko
Levilactobacillus koreensis
Pathway
lko02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lko00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABN16_12255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lko03021
]
ABN16_12255
Transcription machinery [BR:
lko03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABN16_12255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
AKP65698
UniProt:
A0AAC8ZH38
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All DBs
Position
2706268..2707392
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AA seq
374 aa
AA seq
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MAKKTTDQPMFDQKAYNKTVRALIKDNKKAGSITYDDLSDKVATPYTLDAKQMDKLLETI
SDAGISVVDAKGEPDPRAVKAQKAVSKKELKDASTTTGVKINDPVRMYLKEIGRVNLLTA
DEEVALALRIENGEEEAKQELAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEK
FDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREP
TPEEIGAEMDMPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPADHAAYE
LLKEQLESVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKL
RHPSRSKQLKDFLE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaagaccacagatcaaccaatgtttgaccaaaaagcatacaacaagacggtg
cgtgccttaatcaaggataacaaaaaggccggcagcatcacctatgatgacctgtctgat
aaggttgcgaccccttacacgttggatgccaagcaaatggataagttactcgaaacgatt
tccgatgccggaatcagcgtggttgatgctaagggtgagccagacccacgggccgttaaa
gcccaaaaggccgtttcgaagaaggaattaaaggacgcttcgaccacgactggtgtgaag
atcaatgacccggtccggatgtacttgaaggaaattgggcgggtcaacctgttaacggcg
gacgaagaagttgccttagccttacgaatcgaaaacggtgaagaagaagctaagcaagaa
ttagccgaagccaacttacggttggttgtttccattgctaagcgttacgtgggtcggggg
atgcaattcctggacctgatccaagaagggaacatggggctgatgaaagccgtcgaaaag
ttcgactaccggaaagggttcaagttctccacgtacgctacttggtggattcggcaagcc
atcacacgggcaatcgctgaccaagcacggacgattcgaattccggtgcacatggttgaa
accattaacaaattgatccggattcaacggcaactcctccaagacttagggcgggaacca
acgcctgaagaaattggggccgaaatggacatgccaacggaaaaggttcgtgagatcttg
aagatcgcgcaagaaccagtttctttggaaacgccaattggtgaagaggacgactcgcac
ttgggtgacttcattgaagaccaagacgctacgagccctgccgatcacgctgcttacgaa
ttactgaaggaacagttggaaagtgtcttggacaccctgactgatcgtgaagaaaacgtt
ctgcggttacggtttggtttggatgatggccggacgcggactttggaagaagtcggcaag
gtcttcggtgtgacccgtgaacggattcggcaaatcgaagccaaggcgctgcgcaagtta
cgccacccatcacggagcaagcaattaaaagacttcttggaatag
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