Levilactobacillus koreensis: ABN16_12290
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Entry
ABN16_12290 CDS
T03995
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lko
Levilactobacillus koreensis
Pathway
lko03030
DNA replication
lko03430
Mismatch repair
lko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABN16_12290 (dnaE)
03430 Mismatch repair
ABN16_12290 (dnaE)
03440 Homologous recombination
ABN16_12290 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lko03032
]
ABN16_12290 (dnaE)
03400 DNA repair and recombination proteins [BR:
lko03400
]
ABN16_12290 (dnaE)
Enzymes [BR:
lko01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABN16_12290 (dnaE)
DNA replication proteins [BR:
lko03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABN16_12290 (dnaE)
DNA repair and recombination proteins [BR:
lko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABN16_12290 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AKP65704
UniProt:
A0AAC8UY16
LinkDB
All DBs
Position
2718168..2721518
Genome browser
AA seq
1116 aa
AA seq
DB search
MFVPLQVTSTYSLLQSNSRIDDLVQTAKDRGYQTLALTDKNVMYGIVAFYNACQKAGIKP
LLGLTLSTQGLIDATREQEWLFIASDFTGYQQLMQLSTAYQVAAAPVSLQEQAQHLSHLK
VIAPLNSEVHQALAAGDAPAATHVLTQVRSLLAADSLFVGTSPELTPTTQQQLQTVADQS
QATVVALAPVDYLNREDHFAVTVLRAIGTGATLTDTDAAQQTLGIHWLRPAAEQAELFNA
AGLSAAVTAGEQLAAGTAVTLKFQQPQLPQFPTPDQQDSQSYLKELCQRGLQVRLRQNRV
TDDAPYQQRLERELGVIHRMGFDDYFLIVWDVMNYAHRAHIQTGPGRGSAAGSLVAYVLA
ITEVDPLAYDLLFERFLNEERAQMPDIDLDIPDDKREQVLQYVHDKYGHSRVAQIITFGT
LAAKAALRDVGRVLGMAPYEMSEWSAAIPSQLHITLQAAYDQSQKLRNLVADSDQNKLLF
DTAKRLEGLPRNYSTHAAGIVLSQGSLLDLVPLQPGGTDLLMTQYPKDTVEAVGLLKMDF
LGLRNLSILANALALVKKQTGQALDLNQIDLNDAATLKLFAQGETNGVFQFESTGIKRVL
RQLQPDSFELVAAVNALYRPGPMENIDTFIRRKHGQEQVDYAAPALKPILGPTYGVLVYQ
EQVMQVASVMGGFTLGQADLLRRAMSKKKKQTMDAMQKQFVSGAQKLGYAPTVAEQVFAY
MDRFANYGFNRSHAVAYSKLAFQLAYLKAHYPGPFYAALLNSVINVPVKTKMYLTEAKRH
GVNILPPDINQSSAYFNLRDKAIIFGLSSIKGVRRDFLRELLADRRANGPYRDLHQFLQR
IDAKYRKADLLNALVYAGAFDHFGYNRAELIAALPEFLSTVELSGDNVELFAALAPKVTP
KPDLDLMTKLTQEEAVLGAYLSGHPVEQYRPLVKKLHAQPVSDLAVDARVSVIVYVTKIR
TIRTKRGEPMAFVTGSDETAEISLTIFPNLYRQASTWLATDQVIVVQGKVEQQRGLQIVV
DRITPAAQLQPSAPAALPEGARWFVRVDATHDERTIAAKLGQFLTAHSGPVPVIVYQPQT
DQKRVLPRSQWLRGDAQLQSALEELMGSGNIVFQNG
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcccgttacaggtcacgagtacgtacagcttgttacagagcaatagccgaatc
gatgacctcgtacaaaccgccaaggaccggggctatcagaccctagccctaacggataag
aatgtgatgtatgggatcgtggcgttttacaacgcctgtcaaaaagccggtatcaagcca
ctactgggcctgaccctgtccactcaaggcctgatcgatgcgacccgggagcaagaatgg
ctcttcatcgcgagtgactttacgggctatcagcagctcatgcagctgtcgacagcctat
caggttgcggcagcccccgtcagcttacaagaacaggcgcagcacctgagtcacttaaag
gtgattgccccgttaaatagtgaggttcaccaggcgctggccgcgggggatgcaccggcc
gcaacgcacgtgttgacccaggtgcggtcgctgcttgccgccgatagtctatttgtcggg
accagtccagaactgacgccgacaacccagcaacaactacaaactgtggcggaccagtct
caggcaacggtggtggcattggcaccggtcgactaccttaatcgcgaggaccattttgcc
gtgacggtcctgcgggcgattggtacgggagcgaccttgacggatacggacgccgcgcaa
cagaccttggggatacactggttacgtcccgcagccgaacaggcggaactgttcaatgcg
gcggggttgtcggcggcggtgactgccggggagcaactcgctgccggcacagcggtcacc
ttgaaatttcaacaaccacaactgccccaatttccgacacccgaccagcaagactcacag
agttacttaaaagagctgtgtcaacgcgggttacaagtacgtttgcggcagaatcgggta
actgacgacgcgccctatcagcagcgcttggagcgcgagttgggggtcattcaccggatg
gggtttgacgattatttcttgatcgtctgggatgtgatgaactatgctcaccgcgcccat
attcagacgggaccaggtcggggatcggccgccgggtcactggtcgcctatgtgttggcg
attacggaagtggacccgctggcctatgatctgttgtttgaacggttcttgaacgaagaa
cgggcgcagatgcccgatattgacctggatatcccggatgataagcgtgagcaagtcctg
cagtacgttcacgataaatacgggcattctcgagtcgctcagatcattacgtttggaacg
ctggcggctaaggcggccttgcgtgacgtgggtcgggtcctggggatggccccttatgaa
atgagcgagtggagtgcggcaatcccaagtcagttgcacatcacgctgcaagcggcctac
gaccaatcgcaaaaattacgaaatctagtggccgatagcgaccaaaataaactgctattt
gatacagccaagcgtctggaaggcctgccacgtaactactccacccatgcggccggaatc
gtgttgagccagggctctttgctcgacctcgttcccttgcaacctgggggcacggacctg
ctgatgacccagtaccctaaggataccgtcgaagcggtcggcctgttaaagatggacttt
ctgggactccggaacctgagcatcctggccaatgccctggcgttagttaagaagcagacc
ggacaagcgctcgacctaaatcagatcgaccttaacgatgcggcgacgctgaaattattt
gctcaaggggaaacgaacggggtctttcagttcgaatccaccgggatcaaacgagtcttg
cggcaactccaaccggacagttttgagttggtcgccgccgtcaacgccctgtaccggccg
gggccgatggaaaatatcgacaccttcattcggcgaaagcacggccaagaacaggtcgac
tacgcggcaccagccctgaaaccaatcttagggccgacgtacggtgtgttggtctaccag
gaacaagtcatgcaagtggcctccgtcatggggggcttcacgttaggccaagccgacttg
ctgcggcgggccatgagtaagaaaaagaagcagaccatggatgccatgcagaagcaattc
gtgagtggggcccaaaagttagggtacgcgccaacggtggccgagcaggtctttgcctac
atggaccggttcgccaattacgggttcaaccggtcacatgcggttgcctacagtaagtta
gcctttcagctggcttatttgaaggcccactaccccggtccgttctatgcggcactgctc
aactcggtgatcaatgtgccggtcaagaccaagatgtatttgacggaggctaaacgccac
ggggtcaacatcttgcccccagacattaaccagtcgagtgcctattttaatttacgcgat
aaggcgatcatctttggcctgagttccatcaagggggtccggcgagactttctcagagag
ctcttggccgaccggcgagccaatggaccgtatcgtgacctccaccaatttctgcaacga
atcgatgctaagtaccgcaaggccgacctcctaaatgcgttggtctatgccggggcgttt
gatcactttggctataaccgagcggagttgattgcggcgttgcctgagtttctaagcacc
gtcgagctttccggggacaacgtggaactttttgcggcgttagcacctaaggtcacgccg
aagcccgacctggacttgatgacgaagttaactcaggaagaagccgtgctgggggcctac
ttatcgggccacccggtcgaacagtaccgaccactcgtgaagaaacttcacgcccaaccg
gtcagcgacctcgccgtcgatgcgcgggtcagtgtcattgtctacgtgaccaagatccgg
acgattcggacgaagcgcggtgaaccgatggcgtttgtgaccgggagtgatgagacggcc
gaaatcagtctgacgattttccccaatctgtatcggcaggctagcacgtggttggcaacg
gatcaagtcatcgtggtgcagggtaaggtcgaacaacagcggggcctgcagatcgtggtc
gaccgcataacaccggcggcccagctgcaacctagtgccccagcggcgttacccgagggg
gctcgctggttcgtccgggttgacgcgacccacgatgaacgaacgattgcggccaaactc
gggcaatttctaacggctcacagtggtccggtaccagtgatcgtgtatcaaccccagacc
gatcagaagcgggtcctgccaaggtcacagtggctacggggggatgcgcagttacaatcg
gctctggaagagctaatggggagcggcaacatcgtttttcaaaatggatag
DBGET
integrated database retrieval system
