Lepidochelys kempii (Atlantic ridley): 140895005
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Entry
140895005 CDS
T11378
Symbol
TMC3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
140895005 (TMC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lkp02000
]
140895005 (TMC3)
03037 Cilium and associated proteins [BR:
lkp03037
]
140895005 (TMC3)
Transporters [BR:
lkp02000
]
Other transporters
Pores ion channels [TC:
1
]
140895005 (TMC3)
Cilium and associated proteins [BR:
lkp03037
]
Other cilia and associated proteins
Stereociliary proteins
140895005 (TMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
SGBP_N
Orf78
Motif
Other DBs
NCBI-GeneID:
140895005
NCBI-ProteinID:
XP_073160187
LinkDB
All DBs
Position
10:68574043..68605794
Genome browser
AA seq
1096 aa
AA seq
DB search
MYAYKEPPHSNSGDDNGDLNTDSNDPEQIFQNIQFQKEIMANIRCRPWPMRHKLRALRQA
KEIVLKYEGRLTRTRGYQAAGAELWKKFVRLAYNFVVIFIPWEMRIKKIESHFGSGVASY
FIFLRWLFGINIVLTIMTGAFVVLPELLAGAPFGSTISKTIPKEQFASAQDLDTIWSLGG
YLQYSVLFYGYYGRDRKIGKAGYRLPLAYFLVGMAVFAYSFIILLKKMAKNSRMSLASAS
DENYTFCWRVFCAWDYLIGNPEAAESKAAAIVNSIREAILEEQEKKKSKNLAVTICLRII
ANILVLLSLAGSIYIIYFVVDRSQKLERTKKELTLWEKNEVSVVVSLITMIAPSAFELVA
ALEMYHPRTTLRFQLARVLVLYLGNLYSLIIALLDKVDSMSIAEAEANSSASNWIDSTTF
LATRTLPEEDNLSTTIPDIRIRRNSTLTLEKSHTQNYTIPLVLVNQTTSHPYNMQSQKDQ
CWETYVGQEMLKLSIIDMIFTVASILLIDFFRGLFVRYLSDCWCWDLESKFPEYGEFKIA
ENVLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNN
FYLAMLLFMLFLCMLPTIFAIARYKPSLSCGPFSGQEKIYDIVSETIKADFPVWFNTVIN
YISSPVVVLPALLLLFMLIYYLQSIARSLKFTNRQLRMQIQSERTEDKKKVVHIAVARIQ
NLEGNDKRPEQENDLTSQESSARSSTPRKNGSVLNFESPMTKGSRIQTISQSVPQADISR
PVNITPTPLIPTPTVPSIQRRRIEQVANRYSSVVHGSASELCKTKPYTPVTFKKRVEDVH
SEPLFRKGIQQVNPDTLGAGAPAFEGRKVPTTRYFIVNEHESRKKLLRSTSRLPRHFRME
ESGDIVELYPRNVRRYVVRTPHRTYFPHFSEEEEEEEEELRRDLISRSYRPRSLSDLRPA
PRFYIGERVDSQILTGKNLAKLHYKSWDDGFELERERHPHSHKKSHMKHVDVDQHYPEHQ
VKPKSKHKLEQSLTESDSISIGSSSDQQTSSNDQYIQVIHNKEKYLKSGAKLTRKKSKTS
IDLNMSESNELICSNV
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcatacaaggagccaccccacagtaactcaggtgatgataatggtgatttaaat
actgacagcaatgacccagagcagatcttccagaatatacaatttcaaaaagagatcatg
gcaaacatccgttgcagaccatggcctatgagacacaagctgagggcactcagacaagct
aaggagattgtgttgaaatatgaaggcaggctcactagaacaagaggttaccaggcagct
ggtgcagagctctggaagaagtttgttcggcttgcatataattttgtggtaatcttcatt
ccttgggaaatgagaataaagaaaatagaaagtcattttggatccggagttgcctcttat
ttcatctttttgagatggctatttggaatcaatattgtgcttaccataatgacaggagca
tttgtggtcttaccagagctcctggcaggagcgccatttggaagcactatcagcaagacc
atcccaaaggagcagtttgcatcagcacaggacctggacaccatctggtcactggggggt
tatctccagtactctgttttattttacggctactatggccgagatcggaagattgggaaa
gctgggtatcggctgcccctggcttacttccttgttggaatggcagtgtttgcttatagc
ttcatcatcctcttaaaaaaaatggcaaagaactcaagaatgagtctagcaagtgcctct
gatgaaaattatactttctgctggagagtgttctgtgcttgggactatttaataggaaat
ccagaggctgcagaaagcaaagctgctgcaatagttaatagtatcagggaagctatattg
gaagagcaggaaaagaagaaaagcaaaaacctggctgtgacaatatgcttaaggattatt
gcaaacatccttgtgcttctctcacttgctggaagtatttacatcatttactttgttgtg
gatcgatcccaaaaattagagcgcaccaaaaaggaactgacgctttgggagaaaaatgag
gtgagtgttgttgtttcactaattactatgattgcaccctctgcatttgaacttgtagca
gcgctagagatgtaccaccctagaaccactcttcgctttcagcttgccagggttctcgtt
ttatatctgggaaacctctacagtttaattattgctctgttggataaagtggacagcatg
agtatcgctgaagctgaagctaacagcagtgcaagtaactggatagattctaccaccttc
ttagcaaccagaacccttcccgaagaagacaacttatctacaactatccctgatataaga
attaggagaaacagtacattgactctggaaaagagtcatactcagaactacacaatacct
ctcgtgctggttaaccagacaacttcccatccctacaacatgcaaagtcagaaggatcag
tgctgggaaacatacgttggtcaggaaatgctgaagctgtcaattattgacatgattttc
acagtggcaagcatcctgctaatagactttttccgtggactatttgtccgatacttaagt
gattgctggtgctgggatctggaaagcaagtttccggaatatggagaattcaaaattgca
gagaatgtgctacatttggtctacaaccaaggaatgatttggatgggagccttcttttca
ccctgcctcccagcattcaatgttctgaagttgattgggcttatgtacctgaggagctgg
gctgtgttaacatgtaacgtaccacatcagcaggttttcagagcttcaagatctaataac
ttctacttggctatgttgctctttatgttattcttgtgcatgttaccaactatttttgct
attgcccgatataaaccatctttaagctgcggtccatttagtggacaagagaaaatatat
gatattgtgtctgaaacaattaaagcagattttcctgtatggttcaacacagtgattaat
tatatcagcagccctgtagttgtcctccctgcattattacttctattcatgctaatttat
tacctgcagagtattgcaaggtcattaaaattcaccaacaggcaactgaggatgcagatc
caaagtgaaagaaccgaagacaagaaaaaggtggttcacatagcagtagccagaatccag
aatttagagggaaatgacaaaagaccagagcaggagaatgacctcaccagtcaggagtcc
tcagctcggtcatcaacaccccgaaagaatggcagcgtcttgaattttgaatctccaatg
accaaaggcagcagaatacaaacaatctcacaatctgtaccacaagctgatatttctagg
ccagtgaatataactccaacccccttaataccaactcccactgttcctagcatacagagg
cgtagaattgagcaggttgcaaacaggtactcaagtgttgtacatggaagtgcaagtgag
ctctgtaaaacaaagccctacactcctgtgactttcaaaaagcgtgttgaagatgttcat
tctgagcctctttttaggaaaggtatccaacaagtaaatccagatactcttggggcagga
gctccagcttttgagggacgcaaagtgcccaccacacggtattttattgttaacgaacat
gaatcccgcaaaaagcttctccgttccacttcccggctcccaaggcatttcagaatggag
gagtcaggcgacatagttgaattatatccaaggaacgtcagaagatatgtggttcgaaca
ccacacaggacatacttccctcacttcagtgaagaggaagaggaggaggaggaggaatta
aggagagacttgataagcagatcctaccgtccacgctcactctcagatcttcgcccagct
ccccgattttacattggtgaacgtgtggacagtcaaatccttactggcaagaatctagct
aaactgcactacaaatcctgggacgatggctttgagctagaacgagagaggcacccacat
tcccacaaaaagtcacacatgaaacatgtggatgtcgatcagcactatccagagcatcaa
gtgaaacctaaatccaagcataaacttgaacaatctctaacagagtcggattccatttcc
attggatccagcagtgatcagcaaaccagcagcaatgaccaatacatccaagtcattcat
aataaggagaaatacctgaaatctggggcaaagcttaccagaaagaaatcaaagaccagc
attgacctaaacatgtctgaatctaatgaactgatatgttcaaatgtctag
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