Lepidochelys kempii (Atlantic ridley): 140895489
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Entry
140895489 CDS
T11378
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lkp03041
]
140895489 (DDX18)
03009 Ribosome biogenesis [BR:
lkp03009
]
140895489 (DDX18)
Enzymes [BR:
lkp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140895489 (DDX18)
Spliceosome [BR:
lkp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
140895489 (DDX18)
Ribosome biogenesis [BR:
lkp03009
]
Eukaryotic type
90S particles
Helicases
140895489 (DDX18)
Pre-60S particles
140895489 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
140895489
NCBI-ProteinID:
XP_073161356
LinkDB
All DBs
Position
11:complement(14778559..14799097)
Genome browser
AA seq
657 aa
AA seq
DB search
MAAAAGNLPMRLLRRKIHKRNLKLRQRNLALQGAGPPVETRSVDTSEEATNNVISEESVE
ELKVKNVKQPQLIANGEVAAEAKNSESKKKKKKRQIINTEEGTETKKAKTEEQEEDAEAD
DAKDSKDPEVEENNEDPEEREVMDEDTEGPSLPLGVTGAFEDTSFASLSDLISENTLKGI
TDMGFTHMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAIELIYKLRFMPRNGTGV
LILSPTRELAMQTYGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGINIIVATPGRLLD
HMQNTPGFMFKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDL
AKISLKKEPLYVGVDDNKETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSS
CMSVKYHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAARGLDIPEV
DWIVQYDPPDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRYLKQARVPLSEFEFS
WSKISDIQSQLEKLIEKNYFLHKSAQEAYKAYIRAYDSHSLKQIYNVNNLDLPKVSLSFG
FKVPPFVDLNVNSSQGRRFQKRGGGGGFGYQKSKNVHKSKIFKHINKKKSDRRQFSR
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggccgggaacctgcctatgcggctgctccgcaggaagatccacaagcgc
aacctcaagctgcggcagcgcaacctggcgctacagggggccgggccaccagtggagaca
agatctgtggatacctctgaggaagctacgaacaatgtcatttctgaggaatcagtggag
gaacttaaagtgaagaatgtaaagcaacctcaactaattgctaatggtgaagtagctgca
gaagcaaaaaattctgaatcgaagaagaagaagaagaaaaggcaaattattaacacagaa
gagggtacagaaactaaaaaagcaaagactgaagaacaagaggaagatgcagaggcggat
gatgcaaaagatagtaaggatcctgaagtagaagaaaataacgaggatcctgaagagaga
gaagtaatggatgaggataccgaagggcccagtttacctcttggtgtaacaggtgctttt
gaagacacctcatttgcttcactgtctgatctaatcagcgagaacacgctgaaaggaata
actgatatgggctttacacacatgacagaaattcaacataaaagtattaaaccccttctg
gaaggcagagatattctagcagctgcaaaaacgggcagtggcaaaacacttgcattcctc
attcctgccatagagctcatctacaagttaagattcatgcccaggaatggaacgggtgtt
ctgattctttcacctactcgagagcttgccatgcagacttatggagttctgaaagaactg
atgactcatcacgttcacacctatggcctgataatgggaggcagtaacagatcagctgag
gcacagaaacttgcaaatgggatcaacattatagtggcaacaccaggtagacttctggac
cacatgcagaacaccccagggtttatgttcaagaacctgcagtgtctggtaattgatgaa
gcagatcgtatcctggaggttgggtttgaggaagaaatgaaacagatcataaaacttcta
ccaaagcgcagacagaccatgcttttttctgctacacaaacccgaaaggttgaagacttg
gctaagatatctctgaaaaaggagccactgtatgttggggttgatgataacaaggaaaca
gccacagtagatggtcttgaacagggatacgtagtgtgtccatccgaaaaaaggttcctt
ctgctgttcacgttcctcaagaaaaatcggaagaaaaagctgatggtatttttctcatca
tgtatgtctgtgaaataccactatgaactactcaactatatcgacttgccagtcatggcc
attcatggcaagcagaaacaaactaaacggaccaccacatttttccagttctgtaatgca
gattctggaatattgttgtgcactgatgtagctgccagaggactggatattcctgaagtt
gattggattgtccagtatgaccctccagatgaccctaaggagtacattcatcgtgttggt
agaactgccagaggtataaatggcagaggacatgctctactcattttacgaccagaagaa
ttgggttttcttcgttacctaaagcaagccagggtaccattaagtgaatttgaattttcc
tggtcaaaaatttcagacatccagtctcagcttgaaaaattgattgagaagaactatttc
cttcacaagtcagcccaggaagcatacaaagcatacattagagcttacgactcccattct
ctgaaacagatctataacgtcaataacttggatctacccaaagtttccctttcatttggt
ttcaaagtccctccatttgttgatctcaatgtgaacagcagccaaggtagaagatttcaa
aaaagaggcggaggtggaggatttggttaccagaaatccaagaatgtccacaaatccaaa
atcttcaaacacattaacaagaaaaagtcagacagacggcagttttctcgttga
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