Lepidochelys kempii (Atlantic ridley): 140895518
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Entry
140895518 CDS
T11378
Symbol
SPOPL
Name
(RefSeq) speckle-type POZ protein-like isoform X1
KO
K10523
speckle-type POZ protein
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
140895518 (SPOPL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lkp04121
]
140895518 (SPOPL)
Ubiquitin system [BR:
lkp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
140895518 (SPOPL)
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
140895518
NCBI-ProteinID:
XP_073161473
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Position
11:20214226..20276621
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AA seq
392 aa
AA seq
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MSRVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNTNTLK
VPECRLAEDLGNLWETTRFTDCSFCVGGQEFKAHKSVLAARSPVFNAMFEHEMEESKKNR
VEINDVDPEVFKEMMRFIYTGKAPNLDKMADNLLAAADKYALERLKVMCEEALCSNLSVE
NVADILILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNQATDIMETAGWKSMI
HSHPHLVAEAFRALASAQCPQFGIPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagagtccccacccctccaccacctggagagatgtccagtggacctgtggccgaa
agctggtgttacacacaggtgaaagtagtaaaattttcctacatgtggaccattaataac
ttcagtttttgccgagaagaaatgggtgaagttttaaagagttctacattttcatcaggg
ccaaatgacaaaatgaagtggtgcctgagagtaaacccaaagggtttagatgatgaaagc
aaagactacctgtcattatatttgcttttagtcagttgtccaaaaagtgaagtcagagca
aaattcaaattttcccttctgaatgctaaaagagaagaaacaaaagcaatggaaagccaa
agagcatatcgatttgtgcaaggcaaggattggggttttaaaaaatttatccgaagagat
tttttacttgatgaagctaatggtttgttaccagatgacaagcttacattattttgtgag
gtaagcgtggtccaagattcagtaaatatatcaggacagtctaatacaaacactctgaag
gtacctgaatgtcgactagcagaagatttagggaatctctgggaaaccacaagatttaca
gattgcagtttttgtgtaggaggacaagaattcaaagctcataagtctgtccttgcagct
cgttcaccagtttttaatgcaatgtttgaacatgaaatggaggaaagcaaaaagaatcgt
gtagaaataaatgatgtagaccctgaggtttttaaagaaatgatgagattcatttacaca
gggaaagcgccaaaccttgacaaaatggctgacaacctgttggcagctgcagacaaatat
gcactggaacggctgaaggtcatgtgtgaggaggcactctgtagcaacctctcagtagaa
aacgttgctgacattcttatcctcgcagatttgcacagcgcagaacagttgaaagcacaa
gcaatagattttattaacaggtgcagtgttcttagacaacttgggtgtaaagatgggaaa
aactggaatagcaaccaagcaacagacataatggaaacagcaggctggaagtccatgatc
cactctcatcctcacttagtggcagaggcctttcgagcattagcatctgcacagtgtcca
cagtttggcattccacgcaaacgactaaagcagtcatga
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