Lepidochelys kempii (Atlantic ridley): 140895528
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Entry
140895528 CDS
T11378
Symbol
MBD5
Name
(RefSeq) methyl-CpG-binding domain protein 5 isoform X1
KO
K23219
methyl-CpG-binding domain protein 5
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
140895528 (MBD5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lkp03036
]
140895528 (MBD5)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
140895528 (MBD5)
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
140895528 (MBD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140895528
NCBI-ProteinID:
XP_073161519
LinkDB
All DBs
Position
11:25899027..26168350
Genome browser
AA seq
1734 aa
AA seq
DB search
MNGGKECDGGDKDGGLPAVQVPVGWQRRVDQNGVLYISPSGSLLSCLEQVKTYLLTDGTC
KCGLECPLILPKVFNFDPGAAVKQRTAEDVKADEDVTKLCIHKRKIIAVATLHKSMEVPH
PSLVLTSPGGGTSATPVVPSQATTPRSIRNKSHEGITNSVIPECKTPFKLMIGASNAMGR
LYVQEVTGSQQQDLHSVYPRQRLGSNDHGQKSPYRGSHGGMPSPASSGSQIYGDGSISPR
TDPLGSPDVFTRNNSNFHGAPNSSPVHVNRTPLSPPSLMLHGSPVQSSCAMAGRTNIPLS
PTLTTKSPVMKKPMCNFSASMELPRAMFHHKPPQGPPPPPPPSCALQKKPLTSEKDPLGI
LDPIPSKPINQNPVIINPTTYHSNVHSQVPVMNVSMPPAVVPLPSNLPLPTVKPGHMNHG
SHVQRVQHSASTSLSPSPVTSPVHMMASGIGRIEASPQRSRSSSTSSDHGNFMLPPVGPQ
SSCSGIKVPPRSPRSTIGSPRPSMPSSPSTKPDGLHQYKDIPNPIIAGMSNVLNPPSNAV
FPTASAGSGPLKSQPGLLGMPLNQILNQHNAASFPASSLLSAAAKAQLANQNKLAGNNNS
SSSNSGTVASGGNNEGHSTLNTMFPPAANMLLPTSEGQSGRAALRDKLMSQQKDPLRKRK
QPTTTVLSLLRQSHLDSSGVPKPGSDLIRKQNQGSFPISSMSQLLQSMSCQSSHMNSNST
TGCGSSNTVLPCSANQMHFTDANMNSGTLQNSLTQSLPLRGEGMHCQNANTNFVHGTSPG
PNNHLAGLINQMQASGNCGVLSQSGMALGNSLHLNPPQSRIHASSTPVIPNSIVSSCNQT
SPEAGGSGPSSSIAIAGTSQPAITKTTSVLQDGVIVTTAAANPLPSQLPIGSDFPFVGHE
HTLHFPQNCSSNNNLPHSLNPNLLNSLPISLPVNQQHLLNQNLLNILQPSAGEGKSEVIL
NPLGLLNPSVNAALAFLSSDMDGQVLQPAHFQLLAALLQNQAQAAAMVPLPSFNLTISDL
LQQQNNPLPSVTQMTAPPDHLPSNQSDSNRAQTLLTNPLGNPIPSFTGIDTTSNPLLLPA
VTGASGLMALNPQLLGGVLNSASGNTANHPEISIATSSQATTTTTTTSSAVTALSVSTLG
GTAVVSMAETLLNISNNAGNTSGPAKLNNNSVVPQLLNPLLGTGLLGDMSSSINTTLNNH
QLTHLQSLLNNNQMFPSNQQQHQLLQGYQNLQGFQGQPTIPGPANNPNPMACLFQNFQVR
MQEDAALLNKRMITQMGITSVPESSNTTLPPFQDTSCDLPQRTEPTLGQQAKDGLNVAAQ
GDSSVDAIYKAVVDAASKGMQVVITTAVSSTTQMSPIPALSAMSAFTASIGDPLNLSSAV
SAVIHGRNIGVSDHDGRIRNTRGTRILKNSEHSKNSSEGDGFEYYKSAGCNTSRKQWEEE
QNPGGEIHRWKCEEFLDHSTHVHSSPCHERPNNVSTLPLLHGEQHQILLPQRNCQSDKLL
EENFRYNNYKRTMMSFKERLENTVETCAHINGNRLQQSRGFGELLNTSKQDLVMEEQSPS
SSNSLESSLVKDYIHYNGDFNAKSINGCVPSPSDAKSISSEDDLRNPESPSSNELIHYRP
RTFNVGDLVWGQIKGLTSWPGKLVREEDVHNSCQQNTEEGKVEPEKLKTLTEGLEAYNRA
RKRNRKSGKLNNHLEAAIHEAMSELDKMSGNVHQIPQGDRQVKPPKPKRRKISR
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcggaaaggagtgtgacggaggggacaaagatggaggtctgccagcagtacaa
gttccagttggctggcaacgtcgagtggatcaaaatggagtgctctatatcagtcccagt
gggtctttattatcctgcttggagcaggttaagacatacctgctgactgatggaacctgc
aaatgtggcttggaatgtcctctcattcttcccaaggtatttaattttgatcctggagct
gctgtgaaacagagaactgctgaagatgttaaagcagatgaagatgtcactaagctatgc
atccataaacggaaaattattgctgtggctacacttcataaaagcatggaagttccgcat
ccttcactggttcttactagtcctgggggtggaacaagtgcaactccagtagtaccttct
caagcaacaactccaagatcaataaggaataaatcacacgaaggaattacaaattctgtg
atcccagaatgtaaaactcctttcaagttaatgataggggcatctaatgccatgggtagg
ctttatgtacaagaagtgactggaagccagcaacaagatcttcattctgtctatcctagg
cagagattgggcagtaacgatcatggacagaagtctccatatcgtggcagtcatggtgga
atgcctagtccagcttcatcaggatcacagatatatggagatggctcaatctctcctagg
actgatccacttggaagccctgatgttttcacaagaaacaattccaattttcatggagcg
cccaactctagtcctgttcacgtgaacaggactcctttatctccaccttcactaatgcta
catggttctccagttcagtcatcctgtgcaatggctggaaggactaatatacctctttcc
ccaaccttgaccacaaaaagcccagtaatgaaaaaacccatgtgtaatttttcagctagt
atggaactaccacgagcaatgtttcaccataaaccaccccaaggcccacctccacctcct
ccaccttcttgtgctcttcagaaaaagccattaacatcagagaaggatccacttggcatt
cttgaccctattcctagcaagccaattaatcagaatcctgttatcattaacccaactact
taccattctaatgtccattctcaggtacctgtaatgaatgtaagcatgcctcctgctgtt
gtccctttgccaagcaatctccctttgccaactgtaaaacctggtcacatgaaccatgga
agtcatgtacaaagagttcagcattcagcttcaacttccctctctccttcaccagtgaca
tccccagtccatatgatggcatctgggattggaaggattgaggcgtctccccaaagatca
cgttcatcttccacatcatcagatcatggaaatttcatgctgcctccagtaggaccacag
tcatcctgtagtggtatcaaagttcctcccaggtcaccaagatcaacaatagggtctcca
agaccatctatgccatcaagcccttccaccaagcctgatggacttcatcagtacaaggac
atccctaacccgataattgctggaatgagtaatgtattaaatcccccaagcaatgcagtt
tttcctactgcatctgctggaagtggtcccctgaagagtcagcctggtttgctgggaatg
cctttaaatcagatcttgaatcagcacaatgctgcctcttttccagcaagtagtttactc
tcagcagcagccaaagcacagctagcaaatcaaaataaacttgctggtaacaacaatagc
agcagtagcaattctggaactgttgccagtggtggcaacaatgaaggacatagcacttta
aacaccatgtttcctcctgctgccaacatgcttctaccaacaagtgaagggcaaagtggt
cgagcagcactacgagataaactgatgtctcagcaaaaagaccctttgaggaaaagaaaa
caaccaactaccacagtattgagtttgcttagacagtctcatttggatagttctggagtt
cctaagcctggatctgatttgataagaaagcaaaatcaaggttcatttcccatcagttct
atgtctcagttacttcagtccatgagttgtcaaagttctcacatgaacagcaatagtacc
accggttgtgggagctcaaatactgttttgccttgttctgctaaccagatgcattttaca
gacgccaatatgaactctggcactcttcagaattcattgacacagagcttacctttaaga
ggggaaggtatgcactgccagaatgcaaacactaactttgtccatggtactagcccaggc
ccaaacaaccatcttgcaggcttaataaatcagatgcaggctagtgggaactgtggggtg
cttagtcagtcaggaatggctttaggaaattcattacatctgaacccacctcagtcaaga
atccacgcctcctccactccagtgataccaaacagcattgttagcagctgtaatcaaaca
agtcctgaagcagggggttcaggaccatcatcttccatagccatagctggaaccagccaa
ccagccatcacaaagacaacatccgttcttcaagatggtgttatagtcactactgcagct
gcaaacccacttccgagccagctgcccattgggagtgatttcccttttgttggccacgaa
cacacacttcactttccacagaactgctcttcaaacaacaatcttccgcattctttgaat
ccaaaccttctcaattctctacctatctctttgccagtgaatcaacaacatctcttaaac
cagaatctattaaatatactacagccttcagcaggagaaggcaagtctgaagtcatactc
aaccctttaggtttactcaacccaagtgtaaatgctgcgctagcttttctctccagtgac
atggatgggcaggtattacaacctgctcattttcagcttctagcagccctacttcagaat
caagcccaagcagctgccatggttcccctaccatctttcaatttgaccatctcagatttg
ttacaacagcaaaataaccctttaccctcagtaacacagatgacagccccaccagaccat
ttgccaagcaatcagtcagacagcaacagagcacagacccttttaaccaaccccctggga
aaccctataccaagctttacaggcattgacactacttctaaccccttgctcctcccagct
gtcactggggcctcgggattaatggccttaaatccccagctgttgggaggtgtcctgaac
tccgcatcgggcaacactgctaatcatccagagatatccatagcaacctcctcccaggca
accactaccacaaccactacatcatcagcagtgacagcactgtctgtctcaacacttggt
gggacagcagtggtgtcaatggcagaaacattgctgaacatatctaataatgctgggaat
acatctggtccagctaaactcaacaataactctgtggtgccacagctacttaaccctcta
ctggggacaggtctgcttggtgacatgtcgtcgtcgataaacactactttgaataaccat
caactgactcatctccagtcactgttgaacaacaatcagatgtttccttcaaatcagcag
caacatcagcttctccaggggtaccagaatctccaggggtttcaagggcaacccacaatt
cctggaccagctaacaacccaaaccccatggcttgtctgtttcagaattttcaggtgaga
atgcaggaagatgctgctcttttaaacaaaagaatgatcactcaaatggggataacttca
gttcctgagagttccaacactacccttcctccttttcaagatacatcttgtgatttgccg
caaaggactgaaccaactctaggacaacaggcaaaggatggcctcaatgtagctgctcag
ggtgattcttcagtcgatgctatctacaaagcagtcgtagatgctgcaagcaaaggaatg
caagtcgtaatcaccacagcagttagcagtacaacacaaatgagtcccattccagctctg
agtgccatgagtgccttcacagcctcaattggtgacccattaaatctttctagtgctgtc
agtgcagtaatccatggaagaaacattggtgtttctgatcacgacggtaggataagaaac
actagagggacacgaatcctgaagaattcagaacatagtaaaaattcaagtgaaggggat
ggatttgaatattacaaatcagcaggttgcaatacatccagaaaacagtgggaagaggag
caaaaccctggaggagagatacataggtggaagtgtgaggagtttttagaccattcaacc
catgtccacagcagtccttgccatgaaaggcccaataacgtctccacgctgccattgtta
catggtgagcagcatcagatactgttaccacagagaaactgtcaaagtgataaattgttg
gaggagaatttcaggtataacaattacaaaagaactatgatgagttttaaagagagactg
gagaacactgtggaaacatgtgcacacataaatggaaataggcttcaacaaagtagaggg
tttggagagttgctgaacacttctaaacaagacctagtcatggaggagcaatctccaagt
tcctcaaatagtttggaaagttctctagttaaagactatatccattataatggagacttt
aatgccaaaagcattaatggatgcgtgcctagcccttcagatgctaaaagcatcagcagt
gaagatgacctaaggaatccagagtccccttcttcaaatgagttgatacattacaggccg
aggacgtttaatgttggcgacttggtctggggccaaataaaaggactgacttcatggcct
ggaaaattagtaagagaagaagacgttcacaattcatgtcaacaaaacactgaggaaggg
aaggtggagcctgagaagttgaagacactaacagaaggtctggaagcctacaaccgagcc
aggaagaggaacagaaaaagcggaaagctaaataaccatttagaagctgctatacatgag
gccatgagtgagctggacaaaatgtctgggaatgtacaccaaatcccacagggagacaga
caggtgaaacctccaaaaccgaagaggaggaagatctctagataa
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