Lepidochelys kempii (Atlantic ridley): 140895737
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Entry
140895737 CDS
T11378
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lkp03400
]
140895737 (PMS1)
DNA repair and recombination proteins [BR:
lkp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
140895737 (PMS1)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140895737
NCBI-ProteinID:
XP_073162253
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Position
11:52037119..52138836
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AA seq
951 aa
AA seq
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MTLEELKQAPNSSDSKSPGMKQLPAETVRLLSSSQVITSVVSVVKELIENSLDANATSID
VKLENYGFDKIEVRDNGDGIKAADVPVMAVKHYTSKISCPEDLESLTTYGFRGEALGSIC
CISEVLITTKTAADDFSTQYILDSSGHVTSQKPSHLGQGTTVAALKLFKNLPVRKQFYST
VKKCKEELKKIQDLLMAYGIIKPELRIIFTHNKAVIWQKTRVSDHKMSFMSVLGTAVMGS
MVPFQHHCEDPEVFLSGFLPKPESDNSLTSLSSSERSFIYINSRPVHQKEILKLVRQYYN
LKSHKDSSRSYPVFFIHITVPASAVDVNLTPDKTQVLLHNKESVLSAVENVLTSLYGLLP
GTVSCETNKTDVTPVDMVVNETEQTDVLVNKMEPFGNSDPHAHTSSFSFSNEVQNGQAGK
NTEVCLNHQRFSSDNTHGLLNRKEISGTDVTVSDISQDRSINNLSCEDSQNGYSVTLTLD
GSTHMDTQSENRSEHPLRAGHTNEMEKNEANTVPEYVSEISADNWSKGNALKNPRGENLE
PVKILIPEVGGITNHKANENTGEQDHDQQSANQSIKKPNVINDKAGQIMAYDLISNQIIR
KPMSAVALFNQEYRSRLLTDNPKANMEDLMLKIEGLWEKLSREERKKYEEKAMKDLERYN
HQTKKAVEQRIQRSTKETEKRYKPKLKTSLSDQQKLDKLFQSQIEKKHSHNQAMKIVQVP
FSMSSFKRQLQRLEKRNFDKDESCLICHLSFPDAWITASEKKIMLLNPYRVEEALLYKKL
LEQHKLPVEKLDKPIVLTDSLFSGSHYMDSLYNMPKDCQKLNGSIYLSDPRLIANGFRIK
LIPGYSATENQLEIEGMANCLPYYGISDLKEILNAVINKNAKEVYECRPLKVINYLEGEA
VRMSRQLPLYMSKEDVEDTIYRMKQQLGNENKGCVHGRPFFHHLTDIPEFK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgacacttgaagaattaaagcaggctcccaactcctctgattctaaaagcccagggatg
aagcagttgccagctgaaactgtccggctcctttcaagttctcaagtgatcacatcagtt
gttagtgtagtgaaggagctgatagagaattccttggatgccaatgccacaagcattgat
gttaaactggagaattatgggtttgataaaatagaggtgcgagacaatggtgatggcatc
aaagctgctgatgttccagttatggcagttaagcattatacctcaaaaataagctgtccg
gaggatcttgaaagcttgacaacctatggctttcgtggtgaagccttgggatcaatttgc
tgcatatctgaggttttgatcacaacaaagacagctgctgatgattttagcacccagtac
atcttggatagcagtgggcatgtaacttctcagaagccttctcatcttgggcaaggtaca
actgtagctgcactgaagctgtttaagaatcttcctgtaagaaaacagttttactcaaca
gttaaaaaatgtaaggaggaattaaaaaaaatccaagatcttttgatggcgtatggcatc
ataaagccagaactacggataatctttacacataacaaggcagttatttggcaaaagacc
agggtgtcagatcacaaaatgtcctttatgtcagttctgggaactgccgttatgggcagc
atggtaccttttcaacatcactgtgaagatcctgaggtatttctgtctggatttcttcca
aaacctgaatcagacaattctttgacaagtctttcaagttcagaaaggagtttcatctat
ataaacagtcggccagtacatcaaaaggaaatattaaagctggttcgacagtactataat
ctgaagtcacataaagattcttctcgttcgtaccctgttttctttattcatattactgta
cctgcctccgctgtggatgttaatttaacacctgataaaactcaagttttacttcataat
aaggaatctgtcttatccgctgttgaaaatgtattgacatcactgtatgggctactacct
ggaacagtttcttgtgaaactaataaaacagatgttaccccagtggacatggttgttaat
gaaacagaacaaacagatgtgcttgtgaataaaatggaaccatttgggaatagtgatcca
catgcacatacttcatccttttcattcagtaatgaagtgcaaaatgggcaagcaggaaaa
aacaccgaggtctgcttaaatcatcaaagattttctagtgataatactcatggtctcctc
aatagaaaagaaatttctggcactgacgtgactgtgagtgatatatctcaagacagatcc
ataaataatttatcatgtgaggacagccagaatggatatagtgtaacattaaccctagat
ggcagtactcacatggacactcaatctgaaaacagaagtgagcatcctttaagagccggt
cacactaatgaaatggaaaaaaatgaggcaaatacagtccctgagtatgtatctgaaatc
tctgctgataattggagcaaggggaatgcacttaaaaatcctagaggagagaacctggaa
cctgtaaagattttgatacctgaagtaggaggaataacaaatcataaggcaaatgaaaat
actggtgaacaagatcatgatcagcagagtgcaaatcaaagtataaaaaaaccgaatgta
attaatgataaagcaggacagatcatggcctatgatttaattagtaatcaaataatccgg
aaacccatgtcagcagttgccctgttcaaccaagaatatcgttctagattattaactgat
aatccaaaggccaacatggaggacttgatgctgaaaattgaaggactatgggagaaactg
agcagagaggagagaaagaagtatgaagaaaaagccatgaaagacctggaacgatacaac
caccaaaccaagaaagctgtggagcagagaatacagagatcaacaaaagagacagaaaaa
agatacaagcccaaactgaagacttctctctctgaccagcagaaacttgacaaacttttt
cagtctcaaattgaaaagaaacacagccataaccaagctatgaaaattgtacaggtgccc
ttttctatgagttctttcaaacgtcaacttcaaaggcttgagaagagaaattttgataaa
gacgagtcttgcctgatctgtcacctgagttttcctgatgcgtggataactgcttctgaa
aaaaaaatcatgttgctaaatccgtatagagtggaagaagccctactttataaaaaacta
ctggagcaacacaaacttcctgtggagaaactggacaagccaattgtattaactgacagt
ttgttcagcggatctcattatatggattctctctacaatatgccaaaggattgccaaaaa
ttaaatggatcaatttacttgtcggatccaaggcttatagcaaatggttttaggataaaa
ctaataccaggatattcagctacagaaaaccagctggaaatagaaggaatggctaattgt
ctgccatactatggtatatcagatttaaaagaaattctgaatgccgtgataaacaaaaat
gcaaaggaagtatatgagtgtagacctctcaaagtgataaactacttggagggagaagca
gtgcgtatgtctcggcagctacccttgtatatgtcaaaagaggatgtagaggacacaatt
tacaggatgaagcaacagcttggaaatgaaaataaaggctgtgttcatggtcgtcccttt
tttcatcacttaacagatattccagaatttaagtaa
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