Lepidochelys kempii (Atlantic ridley): 140895920
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Entry
140895920 CDS
T11378
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
140895920 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lkp03036
]
140895920 (HDAC4)
Enzymes [BR:
lkp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
140895920 (HDAC4)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
140895920 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140895920
NCBI-ProteinID:
XP_073162929
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Position
11:73538993..74008197
Genome browser
AA seq
1089 aa
AA seq
DB search
MSSQSHPDGLSGRDQPVELLNPPRVNHMPSSVDVNTALPLQVAPTSVPMDLRLDHQFSMP
VTEPTLREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLA
MKHQQELLEHQRKLEQHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
NKKKALAHRNLNHCISNDPRFWYGKTQHSSLDQSSPPQSGVSGTYNHPVLGMYDSKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACNSAPGSGP
SSPNNSSNNISAENGITGSVTSIQAETSLAHRLVNREGSVTQLPLYTSPSLPNITLGLPA
TGPASGGSGQQDAERLAIPTLQQRLSLFPGTHLTPYLSTTTLERDGGTSHNSLLQHMVLL
EQPTAQTPLVTDWYLSGLGPLPLHAQSLVGADRVSPSIHKLRQHRPLGRTQSAPLPQNAQ
ALQQLVIQQQHQQFLEKHKQQFQQQQLHINKMIPKPNEPARQHESHPEETEEELREHQAL
LEEPYSDRVSSQKEMQGLANMVQVKQEPLESDEEETEPPPEVEPGQRQAEQELLFRQQAL
LLEQQRIHQLRNYQASMEAAGIPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFTTG
LVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVH
SEAHTLLYGTNPLNRQKLDSKKLLGSITSMFVRLPCGGVGVDSDTIWNEVHSSGAARLAV
GCLIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKIL
IVDWDVHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFT
GGLEPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGY
LTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPENVLQQRANANAVH
SMEKVIEIHSKYWHSLQRYSSTVGYSLIEAQKCETEEAETVTAMASLSVGVKPSDKRPDD
EPMEEEPPL
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatggactttctggccgagatcagccagtagagctgcta
aatccacctagagtgaaccatatgcccagttctgttgatgtgaacacagcactgcccttg
caagttgcaccaacttcggtccccatggatctccgcttggaccaccagttttccatgcca
gtgacggaacctacactccgagaacagcaactccagcaggaactcctggctctcaaacaa
aaacaacaaattcagagacaaatccttatagctgagttccagaggcagcatgagcaactt
tcccgtcagcatgaggctcagctacatgaacatataaaacagcaacaggaaatgctagca
atgaaacatcagcaggagctcttggagcaccagagaaagttggagcaacatcgacaggaa
caagagctggagaagcagcatagagaacagaaactacaacagctaaaaaacaaagagaaa
ggaaaagaaagtgcagtggcaagcacagaagtaaaaatgaaattacaagagtttgtctta
aataaaaagaaagctttggcacaccggaatctcaaccattgcatttccaatgatccccgc
ttctggtatgggaaaacgcagcacagttctcttgaccagagttcccccccacaaagtgga
gtatcaggcacctacaatcaccctgtactggggatgtacgattccaaagatgactttcca
ctccgaaaaacagcatctgaacccaacctgaagttacgatccagattaaagcagaaagtt
gctgaaagacggagcagtcccctgttacgcaggaaagatggcccagtggttactgctctg
aagaagcgtcccctggatgtcacagactctgcatgcaacagtgctcctggatctggtccc
agttctccaaacaacagctctaataatataagtgctgagaatggaattacaggatcagtc
acaagtattcaagcagagaccagcctggctcacagactagtgaatcgtgaaggctcagta
acacagcttcctctgtacacatctccttccttgcccaacataacgttaggcttgcctgca
actggacctgcaagtgggggatcaggacagcaggatgccgagagacttgctattccaacc
ctacaacagcggctttccttatttcctggcactcacctcactccttacttgagcactacg
acgttggaaagggatgggggaacttcacataactctcttctgcaacacatggtcttactg
gaacaaccaactgcacaaactcccttagtcacagactggtatctttcaggcttggggcca
ctgcccctccatgcacagtctctggttggtgcagatcgggtctccccctcaatacacaaa
ctccggcaacaccgccccttggggcgcacgcagtctgctccccttccccagaatgcccag
gccctccagcagttagtgatccagcaacagcatcaacagttcctggagaaacacaaacag
caattccagcaacagcaacttcacattaacaagatgataccaaaaccgaacgagccagcc
cgccagcatgaaagccaccctgaggagacagaagaggagttacgagaacaccaagcgctt
ttggaggagccatacagtgaccgagtctcaagccaaaaggagatgcaagggttggccaat
atggtgcaggtgaagcaagagccccttgagagcgatgaagaggaaacagagccaccaccg
gaagtagagccagggcagaggcaagctgaacaggagctgctcttccgtcagcaagccctt
ctactggagcagcaacgcattcaccagctgagaaactaccaggcatcaatggaggcagct
ggcatcccagtgtcttttggaggacatcggcctctgtctcgtgcacagtcctcacctgca
tctgccaccttccccatgtccgtacaggagccacccactaagccaaggttcacaacaggc
cttgtctatgacaccttgatgctgaaacaccagtgtacctgtggaaacacaaacagccac
ccagagcatgcagggagaatccagagcatctggtcccggcttcaagaaacaggcctccgt
ggcaagtgtgagtgtattcgtggaagaaaagcaactctagaagagctacagacagttcac
tcggaggcgcatacgctgctgtatggcacaaaccctttgaacagacagaaactggacagc
aagaaacttctaggttctataacatcaatgtttgtcaggctcccttgtggtggtgttgga
gttgacagtgacacaatttggaatgaagttcattcatctggtgctgctcgcctggctgtg
ggctgtctcattgaacttgtttttaaagtggccacaggagaattgaagaatggatttgct
gttgttcgacctccaggtcatcatgctgaagagagtacacccatggggttctgctatttt
aattcggtggcaattgcagccaagcttctccaacagagactcaacgttagcaaaatcctt
atagtggactgggacgtgcaccatgggaatggtactcagcaggctttctacagtgatcct
aacgttctttatatttcactacatcgctatgatgatggaaacttcttcccaggcagtgga
gctcctgatgaggtcggcacaggaccaggtgttggtttcaatgttaatatggcgttcact
ggtggcctcgaaccaccgatgggagacacagaatatttgactgctttcagaacggtagta
atgccaattgccaatgaatttgccccagatgttgtgctggtgtcatctggttttgatgca
gtggaaggccatcctacgcctcttggaggatataatctatcagcaaaatgctttgggtac
ctgacgaagcagctgatgggattggccggaggtcgaattgttctggccctcgaaggaggt
catgacctgacagccatttgtgatgcgtctgaggcatgtgtttctgctttgctgggaaat
gagcttgatcctcttccagaaaacgtcttgcagcagagggcaaatgccaatgcagtgcat
tccatggaaaaagtaattgagatacacagcaagtattggcattctctccagcgttactcc
tccacggtggggtattccttgatcgaggcacagaagtgtgagactgaagaagcagaaaca
gtaacagccatggcatctctgtcagtgggcgtgaagccatctgacaagagaccagatgat
gaacccatggaagaggagcctcccctgtag
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