Lepidochelys kempii (Atlantic ridley): 140896257
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Entry
140896257 CDS
T11378
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140896257 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lkp04131
]
140896257 (VPS35)
Membrane trafficking [BR:
lkp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
140896257 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
ADIP
Motif
Other DBs
NCBI-GeneID:
140896257
NCBI-ProteinID:
XP_073163861
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Position
12:19111560..19152292
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTVIVSQEQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFADEQSLVGRFIHLLHSDDPDQQYLILNTARKHFGAGGNQRIRFTLAPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGETSFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDVVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccgacaacacagcaatctcctcaagatgaacaggaaaagctcctggatgaagccatt
caggctgtaaaggtccagtctttccagatgaagcgatgcttggacaaaaacaagcttatg
gatgctctgaaacatgcctccaacatgcttggtgaactgcggacttctatgctatctcca
aagagctattatgaactctatatggctatttctgatgagctacactatttggaggtatat
ctgacagatgaatttgccaagggaaggaaagtggcagatctttatgaactagtacagtat
gctggaaatattatcccaagactctatctgctgataacagtaggtgttgtctatgtcaag
tcctttcctcagtccagaaaagatatcctgaaagatttggtggaaatgtgccgtggtgtc
cagcatcctctaagaggcttgtttcttcgaaactaccttcttcagtgtaccaggaatatt
ttaccagatgaaggcgaacagacagacgaagaaaccaccggcgacatcagtgattccatg
gattttgtgctgctgaactttgctgagatgaacaaactctgggtgcgaatgcaacaccaa
ggacacagtcgagatagagaaaagagggagcgggaaaggcaggaactgagaatcctagtg
ggaacaaacttggttcgccttagtcaattggaaggtgttaatgtggagagatataaacag
atagttttgcctggaatattggagcaagtagtaaactgcagggatgctctagctcaggag
tatctcatggaatgtattattcaggttttcccagacgaatttcatctccagacccttaac
ccttttctccgagcctgtgcagaattacaccaaaatgtgaatgtgaaaaacattatcatc
gctttaattgacaggttagctttatttgctcaccgtgaagatggaccagggatcccagca
gatattaagctttttgacatcttttcgcagcaggtggccactgttatacagtctagacaa
gatatgccttcagaggacgtggtgtcattgcaagtatcgcttattaacttagctatgaaa
tgctatccagatcgtgttgactatgttgataaagtgttggagacaactgtggaaatattt
aataaacttaatctggaacatattgcaacaagcagtgctgtttcaaaagagctaacacga
cttttaaagatcccggttgatacctacaacaatatcctgaccgttctgaaactaaagcac
ttccacccgctctttgagtactttgactatgagtcaagaaagagcatgagttgttacgtg
cttagcaatgtactggattataacacagtaattgtctcccaagaacaggttgatgcaatt
atgaatttggtgtcaacactgatccaggaccaaccagatcagcctgctgaagaccctgac
cctgaggactttgctgatgagcagagccttgtgggaagatttattcatcttctacattca
gatgatcctgatcaacagtatctgattttgaacactgcccggaaacactttggcgcaggt
gggaaccaacgtattcgtttcacactggcacccttggtttttgctgcataccagcttgcc
tttcgctacaaggagaattccaaagtggatgacaaatgggaaaagaaatgccagaagatc
ttctcatttgcacatcagaccatcagtgctttaatcaaagcagaattggcagagctgcct
ctgcggctctttctccaaggagcactggctgctggagaaactagttttgaaaaccacgaa
acagtggcctatgaattcatgtcccaggcattctctctgtatgaagatgaaatcagtgat
tcaaaagcacagctggctgcaatcaccttgataattggaacatttgaaaggatgaaatgc
ttcagtgaggagaaccatgagcctttgaggactcagtgtgcactggctgcttcaaagctg
cttaagaagccagaccagtgccgggctgtaagcacctgtgcccatctgttttggtctggc
cgaaacactgacaaaaatggagaggagcttcacggaggaaagagagtaatggaatgcttg
aaaaaggctctaaagatagcaaatcagtgcatggatccttcactccaagttcagcttttt
atagaaattctgaacagatacatctatttttatgaaaaggaaaatgatgtggtgacaatt
caggttttgaatcagctcatacaaaagatacgagaagaccttccaaaccttgaatctact
gaagaaactgaacaaattaacaaacattttcataacacactggagcacctgcgtttgagg
agggaatcaccagaatctgaagggccaatttatgaaggtcttgtcctttaa
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