Lepidochelys kempii (Atlantic ridley): 140896924
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Entry
140896924 CDS
T11378
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain isoform X1
KO
K24357
collagen type XX alpha
Organism
lkp Lepidochelys kempii (Atlantic ridley)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140896924
NCBI-ProteinID:
XP_073165159
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Position
13:complement(6079885..6175550)
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AA seq
1472 aa
AA seq
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MLCHRSFLFACITLASHVTGHVHGQGPNRLKLTVLSEDRLQMKWKETEGTISGYKVQVKP
MAGDLEQEVMLKTKTPKATVGGLSPTKEYTLQIYVLNGSQEALFAKRKFVIQELKNISQA
RNTRRNTATSPGKSITPLRNTATEHIPVAKTTSPAPSEASTQTAKDRPEKRRQKAAVSKD
SSETLGRKPNAKFSVTETPTTLKTTLRSPTKSERGDLGQEKHTKGTIKRGPQFQCDTSAT
TDIVLLVDGSWSIGRSNFKLVREFLSTLVSPFNIARDKIRIGLSQYSSDPRTEWNLNTYV
TRDEVLEAVRNLRYKGGNTFTGLALSYVLEQNLKPEAGARSDAVKLVILLTDGKSQDDAN
LSAQTLKNMGIEIFAIGVKNADEAELRQVASEPLELTVYNVLDFPLLSSLVSRLSRVLCT
RIKEKHKSENTDSPVKAVSANTGPHLSPTNLIISEVTSRSMHLSWTPPLRPPKKYRIVYY
PSRGGIPKEVVLDGSTSSTQLVNLTSHTEYLVSVFPIYENAVGDGLRGIISTSLSPPLSL
RALEVSHNSLTLSWQPSSGATQYLVLCSAAPNGAENDTKEVKVEQPEVLLDGLSPSTEYS
VAVYAMYGEEASDPASIQETTLALSPPRHLSFSEIGHGAVKVSWDAASHAVRAHHVTYIS
SRGSNAGEVEVPSSASSTVLRPLSSLTQYFISVSSIYSEGESFPLTGNVTTLKVPPPGDL
KVTELSGNNVRLQWEAAAASDVLVYQIKWNALGEESSQELSVAGNLAAASLPGLKKNTEY
QISIWAYYKDGARSDTVSILHRTTSQSPPTDLVVDSETPNSLQVHWRPPGSHIQYYRVTC
TPESDDSAQQTVMVSGKSSGVTLQSLLPNTAYKVMVSAVHDAGESDAVSTTGQTGRQITS
VLAKLPSTQGSVPFKTEACPTISPTEGSLQGFDMMEAFGLVEREYASIKGVAMEPYVFGG
TRTYTLFRDIQLTQRTSEVLLSGIPSVHTISILLRLLPETPKVPFAVWQLTDEDFQPILG
VILDSSKKSLTYFNHDYKADLQEVTFDQQEVKKIFYGSFHKVHIAVSHFRIKLYLDCKKI
AEKPINAMGSISTAGFIMLGKLTGTRGPRSGSAAFQLQSLQIVCSGSWAEEDRCCDLPAL
RNEETCPALTPSCTCTPGIPGPPGPPGFPGSPGRRGPQGEPGPKGEPGPPGQVGPEGPSG
QQGSLGSQGITVQGPVGPPGIKGDKGDTGIPGMQGIPGAQGAPGRDGIQGAKGVRGLEGT
AGPPGPPGPRGFQGITGARGSSGERGPPGDVGPTGLPGPKGERGEKGEPQSLATIYQLVS
QACEQMIQTHVLKFDSFIHEHTRKPVPVWDNTLKPGGPGPPGLSGIAGTRGERGEDGIPG
QPGKDGYPGERGPGPKGEKGMAGAREEGVQGPRGRAGPPGEQAIGESGLKGSPGSTGPPG
FPGARGNPGAPGYPGGCANTGCYRASTRDFIP
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtcaccgttccttcttgtttgcctgcataaccttggcgagccatgtcacagga
cacgtgcatggtcaagggccaaaccggttgaaactaaccgtcctctcggaagaccggcta
cagatgaaatggaaagaaacagaagggaccatcagcgggtacaaggttcaagtgaagccc
atggcaggtgacctggaacaggaagtcatgctgaaaaccaaaacgcctaaggcaacagtg
ggagggctaagccccacgaaggaatacaccctgcaaatctacgtgctcaatggctcccaa
gaagccctgtttgctaaaaggaaatttgtgattcaggagctgaaaaacatctcgcaggct
agaaatacccgaaggaacacagcgacctccccaggaaagagcatcacccctttgagaaat
acagcaaccgagcacattccagtggctaagacaacgtcaccggctccgagtgaagcctca
acacagacagcaaaagacagacctgaaaagagaagacagaaggcagcagtatccaaggac
tcaagtgaaaccctcggaaggaaaccaaacgccaagttcagtgtgacagaaacaccaaca
acgctgaaaacaactctgcgcagtcccacaaaatctgagcgaggagatctaggccaagaa
aaacacacaaagggaactataaagagaggtcctcagtttcagtgtgacacatctgccaca
actgatattgtcctgctggtggatgggtcttggagtattggacgcagcaacttcaagctt
gtcagggagttcctgagcaccttggtttcacctttcaatattgcccgggataagataagg
ataggtttgtcccagtacagcagtgatccacggacagagtggaacctgaacacctacgtc
acaagggatgaggtgttagaggcggtgaggaacctgcgatataaaggcggcaacactttc
acaggccttgctttgtcctatgtcctagaacaaaatctgaaacctgaagctggtgccagg
tcagatgcagtcaagctggtgatcctcttgactgatggaaaatcacaggatgatgccaac
ctgtctgcccagaccttgaaaaatatgggcatagagatatttgccattggggtgaaaaat
gcagatgaggcagagctgagacaggtggcatcagagcccctggagctcactgtttataac
gtgctggatttccccctgctcagctctctggtcagcaggctcagccgggtcttgtgcacc
aggatcaaagagaagcacaagagtgaaaacacagacagtcctgtgaaagctgtctcagcc
aacactggtccccatctgagtcccaccaaccttataatatcagaggtgacctccagaagc
atgcacctttcctggactcctccgctgagaccaccaaagaaatataggattgtatattac
ccatccaggggaggaatccccaaagaggtagttttagacggatctacctcctccactcag
cttgtcaatttgacctcgcacacagaatacctggtttcggtgtttcctatttatgaaaat
gccgttggagatgggctgaggggcatcatctcgacatctttgtcaccacccctttccctg
cgcgcactggaagtgagccacaacagtctaacactgagctggcagccgtcaagtggagct
actcaatacctggtgctctgttcagcggcccccaatggagcggagaatgataccaaagag
gtgaaagtggaacagcctgaggttctgctggacgggctgtctcccagcacggagtactcc
gtagcagtgtatgcaatgtacggggaagaggcaagtgatccagccagcatccaggaaacc
accttggcactgagccctcctagacacctaagtttctctgagatcggccatggggctgtc
aaggtcagctgggacgcggcttcgcatgctgtgagagctcaccatgtgacctacatctca
agcagagggagcaatgccggggaggtcgaagttcccagcagtgcatcatccactgtgctg
agacctctgtcctctctcacccagtacttcattagtgtcagctccatttatagtgaaggc
gaatcctttccgcttacaggcaatgttaccacattaaaggttccaccaccaggtgacctg
aaggtgactgaactctcaggaaacaatgtccgattgcagtgggaagcagccgctgcctct
gatgtcctggtttatcagattaaatggaatgcacttggagaagagagctcccaggagctg
tctgttgctgggaacctggctgctgccagcttaccaggattgaaaaagaacacagaatac
cagatatcgatctgggcatattacaaggatggagctcgaagcgacactgtctctattctg
cacagaactacttcccagagcccacccaccgacctcgttgtagactcggagacccccaat
agcctgcaggtccactggagaccccctggcagccacatacaatactaccgagtaacctgc
actcctgaatctgatgacagtgctcagcaaacagtaatggtttctggtaaaagcagtgga
gtgaccctgcagtcgctgcttcccaacacagcatacaaggtgatggtttctgctgtccat
gacgcaggagagagtgatgctgtgtcgacaactggccaaactggtaggcaaatcacttct
gtcttggctaaactgccctcaacacaaggctccgttcccttcaaaacagaggcttgcccc
actatcagtcccactgaaggctctctgcaaggatttgacatgatggaggcttttggactg
gtggaaagagaatatgcctccattaaaggagtggccatggaaccatatgtgttcggcggg
acccgtacttacactctcttcagagatattcagctaacccagagaacaagtgaagtgctt
ctctctgggattccgtctgtgcacaccatcagcatcctcctccggctccttccggagact
cccaaagtgccctttgccgtgtggcagctaacagatgaggacttccagccaatcctcggg
gttatacttgactccagtaagaaatccttgacctatttcaatcatgactacaaggctgat
ttacaggaagtcacctttgaccaacaggaagtgaagaagatattctatgggagctttcat
aaggtgcacatagctgtgagccatttcaggatcaaactctacttggactgtaagaaaata
gcagagaaaccgatcaatgctatgggaagcatctccactgctggcttcatcatgctagga
aaactgacaggaaccagaggacccaggagtgggtcagcagcattccagctgcagtcttta
cagatagtttgcagtggctcatgggcagaggaagatagatgttgtgatctcccggcactg
agaaatgaagagacctgccctgccttaactccttcctgcacctgcactccaggtatccca
ggcccgccaggtcctccagggttccctggcagtcctgggagaagaggaccacaaggggaa
ccagggccgaagggtgagccaggtcctcctggacaagttggaccagagggtcctagtgga
caacaagggtcactaggctcccaaggaatcaccgtgcagggcccagtgggaccaccagga
attaaaggggataaaggagacactggaatcccaggcatgcagggtattcctggtgcccag
ggagccccaggcagagacggcattcagggtgcaaagggggtgagaggactggaaggcaca
gcagggcctccggggccaccaggacccaggggtttccaaggaataacaggtgcccgaggc
agtagcggagagcgaggacctccaggtgatgttggacccacaggtctgcctggtccaaag
ggggaaaggggagagaaaggtgaaccacaatccctggccaccatttaccagctggttagt
caggcttgtgagcagatgattcagactcatgtgttgaaattcgactcattcatccacgaa
catacaaggaagccagttcctgtgtgggataacacattgaagccaggaggacctggacca
ccaggtctttcgggtatcgctggtaccagaggagaaagaggagaagacggtatcccagga
cagccaggcaaagatgggtatcctggggaaagaggaccaggacccaagggtgagaaaggg
atggctggagccagggaggaaggagtccagggaccaagaggacgagcaggccctccagga
gaacaagccataggggagtcaggtctgaagggttcccccgggagcaccggtcctccaggt
tttcctggtgccagaggcaatcctggggcacctggctacccaggtggttgtgctaacact
ggatgctacagggcaagcacaagagatttcatcccctga
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