Lepidochelys kempii (Atlantic ridley): 140896963
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Entry
140896963 CDS
T11378
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140896963 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lkp03021
]
140896963 (TAF4)
03036 Chromosome and associated proteins [BR:
lkp03036
]
140896963 (TAF4)
Transcription machinery [BR:
lkp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140896963 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
140896963 (TAF4)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
140896963 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
140896963
NCBI-ProteinID:
XP_073165280
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All DBs
Position
13:8492414..8558481
Genome browser
AA seq
1100 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANVQTESSSSSSKMGLSAPEITKAGAGGVQGGVINHNT
RSQSSALDGVTTASTTTTTTAAGGSEAAAAPGTLSQGKSVVISTMATALSTRNGKIGTTT
VQTLNGSNVVMNSHHSGSAAFSGTPATANPAAAPAVAPLVNNGPGSVGKGNTVNAVLPSA
SNTVIQTSFLSTAVSSASSPSPTVISSQPPPSIVGGGPTVALVRPPIHTAGPTVAAAAAA
TQNGSNTVINSAIGVGSFPAVAAVTVGSGVSLQTSLVNSQPGSSVPAAPTTQVIKSESPK
TIGHAVSQQQTLVASGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTGMAKGT
TSTVAQSLPRTPTATTSGIRATLTPTVLAPRLPQAPQNPTNIQNFQLPPGMVLVRSENGQ
LLMIPQQALAQMQAQAHAQSQPQNTMTPRPATPTNAPPVQISTVPAPGTPIIARQVTPTT
IIKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTALGTATAVQTGTQRTVQGATATS
TAATETMENVKKCKNFLSTLIKLASSGKQSSETTANVKELVQNLLDGKIEAEDFTSRLYR
ELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATTALTAVMLSSSVQRT
AGKATATVTSTLQQPVISLTQPTQVGVGKQGQPTPLVIQQSQKGGALIRPPQVTLTQTPM
VALRQPHNRIMLTAPQQIQLNQLQTVPVVKPTVLPGNKALSTVSPQAAAAQKNKLKEPGG
GSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLLPASLQRRILEI
GKKHGITEIHPDVVSYVSHATQQRLQNLVEKVSETAQQKNVSYKDDERYEQASDVRAQLK
FFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDAN
LTALAAIGPRKKRKVDSPGSGSGTEGSSTNTPVPGSSGVGTTRPFTRQRITRVNLRDLIF
CLENERETSHSLLLYKAFLK
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggtcatcaccac
cagcaccacaaggcgcaggagcccctcagggccgctggggggctgctggggaaccatgtt
gtgagcagcagtagcagcagcagcagccctagccctagccctggaggagtagtagtagga
ggcaatgctaatgtccaaacagagagcagcagcagcagcagcaagatgggactcagtgcc
ccagagatcacaaaagcaggagctggaggagtgcaagggggcgttattaatcataacacc
aggtcccagagttcagctctggatggagtcactacagctagcaccaccaccaccacaaca
gcagcaggcggatctgaagctgctgctgctccagggaccctcagtcaaggcaaatcagtg
gttatcagtaccatggcaactgccttatccaccaggaatggcaaaattgggaccacaacg
gtgcaaactttgaatgggagtaacgtcgtgatgaactctcatcattcgggaagtgctgct
ttctctgggactcctgcaactgctaatcctgctgctgcacctgctgttgcccctctagtt
aacaatggacctggatctgtggggaaaggaaatacagttaatgctgttttgccatcagct
tctaacactgtcatccagacttctttcctcagcactgctgtgtcctctgcctcatcccca
tcacccacagtaatctcttcgcaaccgccaccaagcattgtaggtggggggcctactgta
gcactggtgaggccaccaattcacacagcaggacccacggttgctgcagctgctgcagcc
acccagaacgggagcaatactgtgatcaattcagccattggtgtggggagttttcctgct
gttgctgcagtcactgtgggttctggagtttccctccaaacatcacttgtgaacagccag
cctggttccagtgtgccagcagcacccaccacacaggtcatcaaatcagagtctcctaaa
actatagggcatgcagtatcccagcagcagacactagttgctagtggccagcccagtact
acagggggtaacatgataattgggcaaactatgcaagctgggctttccaatgtggccccc
aatcccggtgggatacctcctgcagctcctggtacccctacaggaatggctaagggcact
accagtacagtggcacaaagtctgccaaggactccaacagcaactacaagtggtatcaga
gcaactttgactcctacagttttagcacctcgtctgcctcaggcacctcagaatccaact
aatattcagaactttcagttaccaccaggcatggtccttgtgcgtagcgaaaatggacag
ttactgatgatccctcaacaagccttggcacaaatgcaggcacaggcacatgcccagtcc
cagccccagaataccatgactcctcgtcctgcaacgcctaccaatgcaccaccagtacag
atatcaacggtgccggctcctggaacgcctataattgcacggcaggtgacaccaactact
ataatcaagcaggtgtctcaggctcagacaactgtacagcccacaacaacgttacagcgt
cctcctgtagtgcagcctcagattgttctgggtggtaccgcacaaacaactgcattaggt
acagccacagctgtacagactggaactcagagaactgtgcaaggagcaacagcaacctct
actgctgccacagaaactatggagaatgtgaagaaatgcaagaattttctatccacatta
ataaaactggcttcatctggaaaacagtcttcagagactacagctaacgtgaaagagcta
gtacaaaacttgttggatggaaaaattgaagcagaagattttaccagcaggctgtaccga
gaacttaattcttcacctcaaccttaccttgtgcctttcctgaagaggagtttacctgcc
ttgagacagttaaccccagactcggccgctttcattcagcaaagtcaacagcagcagccc
acaacgcaagcaacaactgcgctgacagctgtgatgctgagcagctcagttcagcgcaca
gcggggaaggccactgccactgtaacaagtactctccaacagcctgtaattagtctaact
cagcctacgcaagttggggttggcaaacaagggcaacctacaccactggttatccaacag
tctcaaaaaggaggggcattgataaggcctccacaggtaacgttgacacaaacccctatg
gtagcattgcggcaaccacataatcgtattatgcttacagctcctcaacaaattcaactg
aaccaacttcagacagtacctgtggtaaagccaacagtattacctggaaacaaagctctg
tccactgtttcaccacaagcagctgccgctcaaaagaataaactgaaagaacctggggga
ggttcttttagggatgatgatgatattaatgatgttgcatcaatggctggagtcaaccta
tcagaagagagtgcacggatattggcaacaaattctgagttagtgggcacattaacaagg
tcctgtaaagatgaaaccttcctacttccagcatctttgcaaagaaggatactagaaata
ggtaaaaaacatggaataacggaaatccatcctgatgtagttagctatgtatcacatgca
acacaacaaaggttacaaaaccttgtagaaaaagtatcggagactgcccaacaaaagaat
gtttcttataaggatgatgaaagatatgagcaagcaagtgatgttcgggcacagctcaag
ttctttgaacaacttgatcaaatagaaaaacagagaaaagatgaacaagaaagggaaatt
ttaatgcgtgcagcaaagtctcggtctagacaagaagacccagaacagctaaggttgaaa
cagaaggccaaggagatgcagcaacaagagctagcacaaatgagacagagggatgctaac
ttaaccgcattagctgcgattggtcctagaaagaaaagaaaagtggattctccaggatct
ggatcagggacagaggggtccagtacaaatacaccagtcccaggcagctctggagttgga
acaaccagaccatttacgcgacaaaggataacgcgggtgaacctcagggacctcatattt
tgtttagaaaatgagcgagagacaagccattcactattgctatacaaagcattccttaag
taa
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