Lepidochelys kempii (Atlantic ridley): 140897030
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Entry
140897030 CDS
T11378
Symbol
CTCFL
Name
(RefSeq) transcriptional repressor CTCFL isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lkp03000
]
140897030 (CTCFL)
03036 Chromosome and associated proteins [BR:
lkp03036
]
140897030 (CTCFL)
Transcription factors [BR:
lkp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
140897030 (CTCFL)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
140897030 (CTCFL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
Zf-C2H2_ZNF451_C
zf-C2H2_15
zf-C2H2_6
A24_N_bact
zf-C2H2_7th_ZNF462
zf-C2HE
zf-C2H2_ZN142
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
140897030
NCBI-ProteinID:
XP_073165386
LinkDB
All DBs
Position
13:12105683..12127654
Genome browser
AA seq
682 aa
AA seq
DB search
MRCLSSFHCCLLGQVCLMMASQDSALPELFTKIKGAERTWDKAREDDGGGKISWVKERNS
ICDPDAEGLNGALPAKLLEEEGGNLELSPSPVQGEKHLIMLQTVHLKEGEEDVQGVSQLN
VQQQSGVHMVVQRGASVLQPLVVVQQGVGAQQNLPTGVAISIQDGVYTFHDVEVMQINVL
QEKVQAKDEENQSMDKPPGMLLIKIDRSKDLHAVEGKVQQLPPNEEGREKDIFSVEKAKI
LSCKAKDDISVSHYEHKEQEEEAVIKKPDTLEAQTNTQHRKKGEKVIFHCDLCAFTSLRI
SSLNRHMKTHSDEKPHVCHLCLKAFRTVTLLRNHVNTHTGTRPYKCSDCEMAFVTSGELA
RHRRYKHTLEKPFKCSMCKYSSVEASKLKRHLRSHTGERPYNCYLCSYASKDTYKLKRHM
VTHSGEKPYECYVCQARFTQSGTMKIHILQKHSENVPRYQCPHCNTFIARKSDLGVHLRN
LHSYLAVAMKCRYCEALFHERYALIQHKKTHRNEKRFKCDRCSYACKQERHLIVHMRTHT
GEKPFTCVCCSKCFRQKQLLTVHFRKHHDSNFKPTVYECPKCGKGYSRWNNMHKHAESCG
LVRAKSVTRRKGNKGKKKRCDRLKHDVKQEAVDLGSFQDVSFVNTECCASEIVPVVYGIE
TSTPREQKTEMTCEMILNMMDK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgccttagtagctttcattgctgtctcttgggacaggtttgtttaatgatggcc
tctcaggactcagccctgcctgagctgttcaccaaaataaaaggtgctgaaagaacctgg
gacaaggcaagagaagatgatggagggggcaagatatcctgggtgaaggaaagaaacagc
atctgtgacccagatgctgaaggcctaaatggagcccttccagccaagctgctggaagaa
gaaggaggaaacctggagttgtccccatctccagtacagggtgaaaagcatttgataatg
ctgcagactgtgcatttgaaggaaggggaagaagacgtccagggggtcagtcagttgaat
gttcagcagcagagtggggtgcacatggtagtacaacgaggagcaagtgtcttgcagccc
ttggtagtagtgcaacagggagtaggtgctcagcagaatctacccacaggtgtagcaata
agtatacaggatggtgtttatacatttcatgacgtggaggtgatgcagattaatgttttg
caagaaaaagtacaggcaaaagatgaagaaaaccagtccatggataaaccaccaggaatg
ctactgattaagattgacagaagtaaagatctacatgcagttgaaggtaaggtccagcaa
ctgcctccaaatgaagagggaagagaaaaggacattttcagtgttgagaaagcaaagatc
ttgagctgtaaagccaaagatgatatctcagtgtcacactatgaacacaaagagcaagaa
gaagaagcagttataaaaaaacctgacactctagaagctcaaacaaacacacagcatagg
aaaaaaggggaaaaggtgatcttccattgtgatctgtgcgcattcacctctcttagaata
tcaagtcttaatcgtcacatgaaaacccattctgatgaaaaacctcatgtgtgtcacctc
tgccttaaggctttccgtacagttactctcctgcgtaaccatgtgaatacacatacaggg
accagaccgtataagtgcagtgactgtgagatggcatttgtgaccagtggtgagcttgca
cgacacaggcgatataagcacactctagaaaaaccctttaagtgctcaatgtgtaaatat
tctagtgtagaagcaagcaaattgaagcgtcaccttcgttcacatacaggagagcgtcct
tataactgttatctctgtagttatgctagcaaagatacctataagctgaaaagacatatg
gtaactcattcaggagaaaaaccctatgaatgttatgtttgtcaggccagattcacacaa
agtggtaccatgaaaatccatatattacagaagcatagtgaaaatgtgcccagataccag
tgtccacattgtaacacatttattgcaagaaaaagtgatttgggcgttcacttacggaac
ctgcattcctacctggctgtagcgatgaagtgccgttattgtgaagctcttttccatgag
cgctatgctcttattcagcacaagaaaactcatagaaatgaaaagcgattcaaatgtgat
cgatgcagttatgcatgcaagcaggaacgacacttgattgtgcatatgcgtacgcatact
ggtgagaaacccttcacttgtgtatgttgcagcaaatgcttccggcagaagcagcttcta
actgttcacttcaggaaacaccatgattccaattttaaaccaacagtttatgaatgccct
aaatgtggcaagggctattcacgctggaataatatgcataagcatgctgaaagctgtgga
ttggtgagggcaaaatctgttacacgccgcaaaggaaacaagggcaaaaagaaaagatgc
gacagactaaaacatgatgttaagcaagaagctgttgacctgggatcattccaagatgtt
tcctttgtgaacacggaatgctgtgccagtgagattgtccctgtcgtatatggaatagaa
acaagtactccgagggagcagaaaacagaaatgacttgtgaaatgatcctcaacatgatg
gacaaataa
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