Lepidochelys kempii (Atlantic ridley): 140897628
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Entry
140897628 CDS
T11378
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
140897628 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lkp01007
]
140897628 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lkp03016
]
140897628 (VARS1)
Enzymes [BR:
lkp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
140897628 (VARS1)
Amino acid related enzymes [BR:
lkp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
140897628 (VARS1)
Transfer RNA biogenesis [BR:
lkp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
140897628 (VARS1)
Prokaryotic type
140897628 (VARS1)
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GFIT
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NCBI-GeneID:
140897628
NCBI-ProteinID:
XP_073166582
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Position
14:43860505..43876243
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AA seq
1273 aa
AA seq
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MPTLYLSPHPDNFQNHRVLIAARYAPALPEVVELPEQGLPPQPPAPCPLPKLPALESRLG
VWVSGPAAVAHLLSPERLRGQGPAGGALVQQWVSYAEGEIAPAACTAAFSALGLAEQSKQ
VVERAVAELRRALAVLDGHLKLRTYLVDEAVTLADVTVACALLLPYKYVLDPPSRAPYPN
VLRWFLTCVNQPQFQAVLGPVKLCEQARGGDTPRPKTQEHVGPAEKGPAVGSAPGPGEAP
VKSASQLKKEAKKKEKLEKFQQKKEKSQQQQGEKKVKAEKKEKKDPGVLTYDAPTHPGEK
KDVTGPMPDAYSPQYVEAAWYPWWESQGFFKPEYGRQCVSERNPKGLFMMCIPPPNVTGS
LHLGHALTNAIQDALTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWRERGQTRHDLGR
EAFVREVWKWKNEKGDRIYHQLKKLGSSMDWDRACFTMDPKLSCAVQEAFVRLHEEGVIY
RSKRLVNWSCTLHSAISDIEVDKKELPGRTLLPVPGYKDKVEFGVLVSFAYKLEDSEEEV
VVATTRVETMLGDTAVAVHRQDPRYQHLHGKCVLHPFTGRRMPIVCDDFVDMGFGTGAVK
ITPAHDHNDYEVGQRHGLDCITIIDDSGSLINVPPPFLGMKRFEARGAVLEALKQKGLFK
EVKDNPMVVPVCSRSKDVVEPLLKPQWYVRCEGLARGAADAVRRGDLRILPPFHCKTWFQ
WMDNIRDWCISRQLWWGHRIPAYFVTVDDPSVPPGEDTDGRYWVSGRSEEEAKDKAAKAF
GVTPDKISLRQDDDVLDTWFSSGLFPFSIFGWPNSSEDLQVFYPGTLLETGHDILFFWVA
RMVMLGLKLTGKLPFREVYLHAVVRDAHGRKMSKSLGNVIDPLDVISGITLEGLHAQLLE
SNLEPAEVERARQGQKSDYPAGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCN
KLWNATKFAVRALGPGFQPPPGPEPGGAESLIDRWILSRLSLAVELSDAGFRAYDFPAVT
TAVYNFWLYELCDVYLECLKPVFAEGGASAVTAARSTLYTCLDAGLRLLAPFMPFVSEEL
FQRLPRRGPHAPPSICVTPYPSTEQFCWRDRGLEGTVEFSLGIVRAVRSLRADYNLTRTR
ADCFLQCPDSGAADAASRCSPYIRSLSSSGRVRVLGPGEAPPAGCAVAVASDKCTVHLLL
KGLIDAEKEISKLAGKQGELQKQIERLQERMETPDYGTKVPPKVQEADAAKLQQSRTELQ
KVMEAVETFQRMI
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccctgtatctctccccgcacccggacaatttccagaaccaccgggtgctgatc
gcagcccgctatgccccggcgctgcccgaggtggtggagctgccggagcaggggctcccc
ccgcagccccctgccccctgccccctgcccaagctgccggctttggagagccggctgggg
gtctgggtctcgggcccggccgcggtggctcatctcctgtccccggagcggctgaggggg
caggggccagcggggggcgctctggtgcagcagtgggtgagctacgctgaaggggagatt
gcccctgccgcatgcacagccgccttctccgccctgggtctggcggagcagagcaagcag
gtggtggagcgggcggtggccgagctgcgccgggcgctggccgtgctggacgggcacctg
aaactgcgcacgtacctggtggatgaggctgtgacgctggcagacgtgactgtggcctgt
gccctgctgctgccttacaaatatgtgctggacccccccagccgggctccttaccccaac
gtcctgcgctggttcctgacttgcgtcaaccagccccagtttcaggccgtgctggggccg
gtgaagctgtgtgagcaggcgcgtgggggtgacacccccagaccgaagacccaggagcat
gtggggcctgcagagaagggaccagcagtggggtcagcccctggccctggggaggccccg
gtcaagagcgcctctcagctgaagaaagaggcaaagaagaaagagaagctggagaaattc
cagcagaagaaggagaaaagccaacagcagcagggggagaaaaaggtaaaagccgagaag
aaggagaagaaagaccccggggttctgacctacgacgcccccacacacccgggggagaaa
aaagacgtgaccggccccatgcccgacgcctacagcccgcagtatgtggaggcggcctgg
tacccgtggtgggaaagccagggcttcttcaaacctgagtatgggcggcagtgcgtctcg
gagcggaaccccaaagggctcttcatgatgtgcatcccgccccccaacgtcaccggctcg
ctgcacctgggccacgcgctcaccaacgccatccaggacgccctgacccgctggcaccgg
atgcgcggcgagacgacgctgtggaacccgggctgcgaccacgccggcatcgccacgcag
gtggtggtggagaagaagctgtggcgggagcgggggcagacgcggcacgacctgggccgg
gaggcgttcgtccgcgaggtctggaaatggaagaacgagaagggcgacaggatctaccat
cagctcaagaagctcggatcgtccatggactgggatagagcctgcttcacgatggacccg
aaattgtcctgtgctgtccaggaagccttcgtccggctgcacgaggagggggtgatctac
cgcagcaaacgcctggtcaactggtcctgcaccctgcactctgccatctccgacatcgag
gtggataagaaggagctgcccggtcggaccctcctgcccgtccctgggtacaaggacaag
gtggaatttggggtgctggtgtcattcgcctacaagctcgaggactcagaggaggaggtt
gtcgtggcgacgacccgggtggagaccatgctgggggacacggcggtggccgtgcatcgg
caggacccccgctaccagcatctccacgggaagtgcgtcctgcaccccttcaccgggcgg
cgcatgcccatcgtctgcgacgacttcgtggacatgggctttgggacaggcgcggtgaag
atcaccccggcccacgaccacaacgactacgaggtggggcagcgacatggcctggactgc
atcaccatcatcgacgacagcggctccctcatcaatgtgcccccccccttcctgggtatg
aagcggttcgaggcccggggggctgtgctggaggccctgaagcagaaggggctgttcaag
gaagtcaaggacaaccccatggtggtgccggtgtgcagccgctcgaaggacgtggtggag
ccgctgctgaagccgcagtggtacgtgcgctgtgaggggctggcccggggggcggccgac
gccgtgcgccgcggggacctgcgcatcctgccccccttccactgcaagacctggttccag
tggatggacaacatcagggactggtgcatctcccggcagctgtggtggggtcaccgcatc
ccggcctacttcgtcactgtcgacgacccctcggtgccccccggagaggacacggacggc
agatactgggtgagcgggcggagcgaagaagaggccaaggacaaagcggccaaggccttt
ggggtgactccggacaagatctcactgcggcaagatgacgacgtcctggacacttggttc
tcctccggcctcttcccgttctccatcttcggctggcccaactctagcgaagacctgcag
gttttctacccggggaccctgctggagacgggccatgacatcctcttcttctgggtggcg
cgcatggtcatgctggggctcaagctgacgggcaagctgcccttccgcgaggtttacctt
cacgctgtcgtccgcgacgcccacggaaggaaaatgagcaagtcattaggcaatgtcatc
gacccactggatgtgatcagcgggatcacgctggagggtttgcacgcgcagctcctggag
agcaacctggagccagccgaggtggagcgagccaggcagggccagaaaagtgattacccc
gccgggatcccggagtgcggcacggacgccctgcgcttcgccctctgcgcgtacacctcc
cagggccgcgacatcaacctggacgtgaaccgcatcctgggctaccggcacttctgtaac
aagctctggaacgccaccaaattcgccgtccgcgccctggggcccgggttccagcccccg
ccgggacctgagcccggcggcgccgagagcctgatcgaccgctggatcctgagccggctc
agcctggccgtggagctgagcgacgccgggttccgggcctacgacttcccggccgtcacc
acggccgtctacaacttctggctctatgagctctgcgacgtctacctggagtgcctgaag
cccgtgttcgccgaggggggggcgtctgcggtgacggccgcccgcagcaccctctacacc
tgcctggatgccggcctgcggctccttgcccccttcatgcccttcgtcagcgaggagctt
ttccagcgcctgccccgccgcggcccccacgccccccccagcatctgcgtcaccccctac
cccagcaccgagcagttctgctggcgggaccggggcctggagggcacggtggagttctcg
ctgggcatcgtccgcgccgtgcgctccctgcgggccgactacaacctcacccggaccaga
gccgactgtttcctgcagtgcccggactcgggcgcggccgatgccgccagccgctgctcc
ccctatatccgcagcctctcctcctccggccgggtgcgggtgctgggcccgggtgaggcg
ccccctgctggctgcgccgtggccgtcgcctccgacaagtgcactgtccacctgctgctc
aagggtctgatcgacgcggagaaggagatctccaagctggccgggaagcagggcgagctg
cagaagcagatcgagcggctgcaggagaggatggaaacccccgattacggcaccaaggtg
ccccccaaggttcaggaggccgacgctgccaagctgcagcagagccggaccgagctgcag
aaggtgatggaggcggtggagactttccagaggatgatctga
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