Lepidochelys kempii (Atlantic ridley): 140897734
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Entry
140897734 CDS
T11378
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140897734 (CPSF4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lkp03021
]
140897734 (CPSF4L)
03019 Messenger RNA biogenesis [BR:
lkp03019
]
140897734 (CPSF4L)
Transcription machinery [BR:
lkp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
140897734 (CPSF4L)
Messenger RNA biogenesis [BR:
lkp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
140897734 (CPSF4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_12
zf-CCCH_3
zf-CCCH_4
zf-CCCH_RBM22
zf-CCHC
zf-CCCH_11
zf-CCCH_DUS3L
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
140897734
NCBI-ProteinID:
XP_073166824
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All DBs
Position
14:4023746..4030999
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AA seq
375 aa
AA seq
DB search
MQIPGGSAGTGSWEQLGAQPGFLAGSEKRGDGTCWGGRPQRGCSTQAVNSEQAAGRRGRV
NMRGREFVAGPFFNPIPQLGLFSLPEAHGEGWPGSTLGLGLGWGYLPSPADWEDMQELIA
GVEKLMFNLERDVEHQRGALLLPFPGMDKSGASVCEFFLRGLCAKGLMCPFRHIHGEKTV
VCKHWLRGLCKRGDQCEFLHEYDMTKMPECYFYSKFGECSNRECPFLHLDPASRIKDCPW
YDRGFCKQGPLCKYKHTRRVMCVNYLAGFCPEGPKCKFMHPKADLMPCNSDVSQGLPPPS
QAADSKSVHEQQAPQVLLLSYQPGARAAQCQREEAGGYPYGMLRPLGQVTCFKCGDKGHY
ANKCSKSRLGIQLGK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagattcctgggggctcagcaggaacagggagctgggagcagctgggggctcagccc
ggtttcctagccggatcggagaagaggggtgatgggacgtgctggggaggaaggccgcag
aggggttgcagcacccaggctgttaactctgagcaagcagcaggaaggaggggaagggtg
aatatgagagggagggaatttgtagctggccccttcttcaatcccattcctcagctgggg
ctcttcagcctgcctgaggcacacggggaaggctggccgggctccactctgggtctgggg
cttggctgggggtatctcccgagtcccgctgactgggaggacatgcaggagctcattgct
ggggtggagaagctcatgttcaatttagagcgggatgtggagcaccagcgaggggccctg
ctcctgccctttccaggcatggacaagtcgggggcgtccgtgtgtgagttcttcctccga
ggactgtgcgcgaagggcctgatgtgtcctttccggcacatccacggtgagaagacggtg
gtgtgtaaacactggctgcgggggctgtgcaagcggggagaccagtgcgagttcttgcac
gagtacgacatgaccaagatgccggagtgttatttctactccaagtttggcgagtgcagc
aatagagagtgcccctttctgcaccttgatccagcgtccagaattaaagactgtccctgg
tatgacagagggttctgcaaacagggtcctctgtgtaaatacaaacacaccaggagggtg
atgtgtgtcaactacttagctggcttctgccccgaaggacccaaatgcaaattcatgcac
cccaaggcagacctgatgccgtgtaactcagatgtctcccaggggctgccgccaccatcc
caggctgctgacagcaagagcgttcacgagcagcaggccccgcaagtcctgttgctttct
tatcagcctggggctagggctgcccaatgccagagggaggaggctggtggctacccctat
ggaatgctccggccccttgggcaggtcacatgcttcaagtgtggagataagggtcactat
gccaacaaatgcagcaagagtcggctgggaatccaactggggaaatga
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