Lepidochelys kempii (Atlantic ridley): 140899296
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Entry
140899296 CDS
T11378
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lkp04131
]
140899296 (GAPVD1)
Membrane trafficking [BR:
lkp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
140899296 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
140899296
NCBI-ProteinID:
XP_073170661
LinkDB
All DBs
Position
16:27521881..27581817
Genome browser
AA seq
1501 aa
AA seq
DB search
MQSEYCVVLSTSKMVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYHTAWI
SKQQRINLDRLIITSAEASPAECCQHAKVLEDTQFVDGYKQLGFQETAYGEFLNRLRENP
RLIASSLVAGEKLSQDNAQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNP
RRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFS
PAQQEKLFGEKGTERFKQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWILSQM
YKTLSCVDRLEVGEVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRL
LQQLAMTGSEEGDPHMKSNLGKFDKSCVAAFLDVVISGRAVETPPMSSVNLLEGLSRTVV
YMTYSQLTNLVGFMRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSP
ATTPANKKNRLPIGQQLAAITAWDTSTTNLTAHINLVTPFATRSRNRSNIPMDQHGDHEG
SSQDSIQEVQPEEVLVISLGTGPQLTPGMMSENEVLNMQLADGGQGDVPVDETKLHGKPD
KTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQA
TTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAA
AENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELES
CSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVT
SPDMDETAHGASQLTSPPSQSDSLLALFDPLSSHEGVSAVVRPKVHYARPAHPPPDPPIL
EGTMGGNEARLPNFGSHILIPTDLEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPGWNR
RPGNEERELPTQTPNIGAAASVVAPQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWR
KRFVSAMPKAPIPFRKKEKQEKDKDDFVSERFSTLQDDPSPRLSAQAQAAEDILDKYRNA
IKRTSPSEGAIVNYESAEVIGDGESIHDSPRDEALQNMSADDLPDSASQVAQPQDSAFSY
RDAKKKLRLALCSADSIAFPMLSHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNL
MAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTHAHLERLLQR
VLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMA
QDVIWQNASEEQLQDAQLAIERSVMNRIFKLSFYPNQDGDILRDQVLHEHIQRLSKVVTA
NHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVP
GADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLTGEESYWWMQFTAAVEFIKTIDDR
K
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgagtactgtgtagtcctctcaacctcaaagatggtgaagctagatattcac
actctggctcatcacctcaagcaagaacgactctatgtaaactcagaaaagcaacttatt
cagagattaaatgcagatgtattgaagacagctgagaaactgtaccacacagcctggatt
tccaagcagcaaaggattaacttggacagacttatcataacaagtgctgaagcttctcct
gctgaatgctgccagcatgccaaagtcttggaggacacacagtttgttgatgggtacaag
cagttgggatttcaagagactgcttatggagaattcctcaacagattgagagagaaccct
aggcttattgcttcctctctggttgctggagagaaactcagccaggacaacgcacaaagt
gtcattcacacggtctttacctccatctatggcaattgcatcatgcaggaagatgagagt
tacctccttcaagttttgcgttacttgatagaatttgaactgaaggaaagcgacaatccc
agacggcttttgaggagaggtacctgtgcattcagcattttattcaaacttttttctgag
ggactcttttctgcaaaactgttccttactgcaacattgcatgagccaatcatgcagctg
ctggtggaagatgaagaccacctagaaacagatgcaaacaaattgatcgagaggttctct
cccgcgcaacaggaaaaactctttggggagaaaggcacagaaaggttcaaacaaaaagtc
caagaaatggtggattccaatgaggctaagttagtggcgttggtaaacaaattcattggt
tatctcaagcagaacacatactgctttccgcatagcttgcgatggattttatcacaaatg
tataaaacactctcctgtgtagaccggctggaagttggggaggtgcgagcaatgtgcacg
gatcttctgcttgcatgtttcatttgtcctgcagttgtcaacccagaacagtatggaata
atttccgatgccccaataaatgaggtggcaagatttaatctgatgcaggtcgggagactt
ttgcagcagttggcaatgacaggctctgaagagggagatccgcacatgaagagcaacctt
ggcaaattcgacaaaagctgtgttgctgctttcctggatgttgttattagtgggcgcgct
gtggaaacccctccgatgtcctcagttaaccttctagaagggttgagtaggactgtggtt
tatatgacatacagccaacttactaatctggttggttttatgcgaaatgtaatgtcaagt
gaccaactgaaggaagatcggatggctctggaaaacttgttggcaaacttaccccagaac
aaacccgggaaaagtagcagccttgaaatgactccttacaatactccacaactctcccct
gcaactactccagccaacaaaaaaaatcgactgcctataggacaacagttggcagccatt
actgcctgggatacttctaccaccaatctcacagctcacattaatctagtaaccccattt
gctacccgtagcagaaatagatcaaatattccaatggaccaacatggagaccatgaagga
tcctcccaggattctatacaggaagttcagccagaagaagtactggttatttctttggga
acaggtccgcagcttactcctggtatgatgtcagaaaatgaggtcttgaacatgcagctt
gccgatggaggacaaggagatgtccctgttgatgaaaccaaactccatggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggaatatctgaaggtccttca
aatcgctccaattctgtgtcctctttggatttagaaggagagtctgtgtcagagcttggt
gcagggccttctgggagcaatggtgttgaagccctgcagctgttagaacatgaacaagct
acgactcaggataatcttgatgacaagctccgtaaatttgaaattcgtgatatgatggga
ttgactgatgatagggacatatcagaaactgtgagtgagacctggagcacagatgtcttg
ggcagtgactttgatccaaatattgatgaagaccgtttgcaagaaattgcaggtgcagct
gcagagaacatgcttggcagcttgctgtgtttgccgggttcaggatctgtgctgcttgac
ccctgcacagggtcaaccatatccgaaaccaccagtgaagcttggagtgtggaggtattg
ccaagtgattcagaggccccagacctaaagcaggaggaaagactgcaggagctggaaagc
tgttctggactgggcagcacctctgatgacacagatgtgagggaggtcagttctcgtccc
agtacaccaggcctcagcgtcgtgtcaggtattagtgcaacctctgaggatattcctaat
aagatcgaggaccttaggtctgagtgtagctctgactttggagggaaagattctgtgaca
agtcctgatatggatgaaacagctcatggagccagtcagttgacttctcccccttctcag
tcggactctttgcttgcattgtttgaccctttgtcatcacacgaaggtgtatcagcagtg
gttcggcctaaagtgcactatgcaagacccgctcatccgccaccagatcccccaatcttg
gaagggactatgggaggtaatgaggccagattaccaaattttggctcccacatcttaatc
ccaaccgatttggaggcgttcaaacaaaggcattcctacccagaaagactggtccgcagc
agaagctctgacatagtgtcatcagttcggagacctatgagtgatcctggctggaacagg
cggcctggtaatgaagaaagggagcttcctacacaaacacccaacattggggcagctgct
tcagtggttgcacctcagtcctcttcatcatcccccagtaaagactcctctagaggagag
attgaggaacgaaaagatagtgatgatgagaaatctgacaggaacaaaccctggtggaga
aagcgtttcgtttctgccatgcccaaagctcctataccatttagaaaaaaagaaaaacaa
gaaaaagacaaagatgactttgtgtctgagagattctcaacacttcaagatgatcccagt
cccaggctaagtgcacaggcacaggctgcagaggatatcctggacaaatacaggaatgct
attaagcgaaccagcccaagcgaaggagctatagtaaattatgaaagtgcagaggtaatt
ggagatggtgaaagtatacacgactctccacgtgatgaagccctgcagaatatgtcagct
gatgacctcccagattctgcaagtcaagtagcacagccacaagactctgctttctcttac
agggatgcaaagaagaaactgagactggctctttgttcagcagattccattgccttccca
atgttgtcccattcgacaagaaacggcctaccagatcacaccgaccctgaagacaacgaa
attgtgtgcttcctgaaagttcagttagctgaagctattaacctccaagataagaatttg
atggcccaactgcaggagacaatgcgctgtgtaagccgctttgataaccggacatgtcga
aagctgctggcctccattgcagaggattataggaaaagggctccatacattgcttattta
actcggtgtcgccaaggcctgcagaccacacacgcccatctggaaaggctcctgcagagg
gttctacgtgataaggaagtggccaacagatatttcaccacagtttgtgtgaggttactt
ctggaaagcaaagaaaaaaagataagggaattcattcaagatttccagaaactcactgca
gcagatgataaaacagcccaagtagaagactttcttcagtttttatatggggccatggcc
caggatgtcatctggcaaaatgccagtgaagagcagctccaggatgcacagctagccata
gaacgcagtgtgatgaatcgcattttcaaactctcattctaccctaatcaggatggagac
attttgcgtgaccaggtccttcatgagcatatccaaaggttgtctaaggtagtgactgca
aaccaccgagcccttcagataccagaggtgtatctccgggaggccccatggccatctgca
cagtccgaaatccgcacaatcagcgcttacaaaaccccacgggacaaagtgcagtgcatt
ctgcgaatgtgttcaaccatcatgaacctgctgagtttggccaatgaagattcagtccct
ggggcagatgactttgttcctgttttggtgtttgttctgataaaggcaaacccgccctgc
ttgttgtccacagttcagtacattagtagcttctatgctaactgtttaactggagaagaa
tcttactggtggatgcagttcacagcagcagttgaatttattaaaaccattgatgatcgc
aagtga
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