Lepidochelys kempii (Atlantic ridley): 140899486
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Entry
140899486 CDS
T11378
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03030
DNA replication
lkp03410
Base excision repair
lkp03420
Nucleotide excision repair
lkp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140899486 (RFC2)
03410 Base excision repair
140899486 (RFC2)
03420 Nucleotide excision repair
140899486 (RFC2)
03430 Mismatch repair
140899486 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lkp03032
]
140899486 (RFC2)
03036 Chromosome and associated proteins [BR:
lkp03036
]
140899486 (RFC2)
03400 DNA repair and recombination proteins [BR:
lkp03400
]
140899486 (RFC2)
DNA replication proteins [BR:
lkp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
140899486 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
140899486 (RFC2)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
140899486 (RFC2)
DNA repair and recombination proteins [BR:
lkp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
140899486 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
140899486 (RFC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
AAA_lid_RFC1
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
nSTAND_NTPase5
AAA_14
AAA_16
Viral_helicase1
Mg_chelatase
AAA_11
Rad17
AAA_assoc_2
RuvB_N
DNAX_ATPase_lid
AAA_19
nSTAND3
AAA_24
MipZ
AAA_18
AAA_5
AAA_28
AAA_25
ABC_tran
AAA_23
AAA_30
NTPase_1
SLFN-g3_helicase
RNA_helicase
MeaB
Motif
Other DBs
NCBI-GeneID:
140899486
NCBI-ProteinID:
XP_073171191
LinkDB
All DBs
Position
17:16683382..16696272
Genome browser
AA seq
398 aa
AA seq
DB search
METRAGGRAAPAGRRLFSGGPWLRGPAVTGRGGGATAGGRERQAGMDAEMAEAERPGPRA
GEQRGAAEAPGASGSAHYELPWVEKYRPMKLSEIVGNEDTVSRLEVFAREGNVPNIIIAG
PPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHK
IIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDA
QILARLMKIVERENVQYTDDGLEAIIFTAQGDMRQALNNLQSTCSGFGFINSENVFKVCD
EPHPLLVKEMIQHCVNANIDEAYKILAHLWRLGYSPEDIVGNIFRVCKTFQMPEYLKLEF
IKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAAPAES
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggagacccgggcaggaggccgcgcagccccagccgggcgccgcctcttttcaggcggc
ccctggctccgcggcccggcggtgacagggcgagggggcggcgctacggccggcgggcgg
gagcggcaggccggcatggacgcggagatggcggaggctgagcggcctgggccgcgagcc
ggggagcagcggggagcggccgaggcccctggcgcctccggcagcgcccactatgagctg
ccctgggttgaaaaatacagacctatgaagctatctgaaatagttgggaatgaagacact
gtgagcagactggaggtttttgcaagggagggaaatgtaccaaatattataattgctggt
cctccaggaactggtaaaacaaccagtatcttatgtttggctcgtgcactgcttggtcct
gcattaaaggatgctgttctggagctgaatgcttcaaatgacaggggcatcgatgttgtg
agaaacaaaatcaaaatgtttgctcagcagaaggtcacacttcccaaaggtcggcataag
ataatcatcctggatgaagcagacagcatgacagatggagcacagcaagcattgcgaaga
accatggaaatttattccaaaacaactcgctttgcacttgcatgcaatgcctcagataaa
atcatagagccaatccagtcccgctgtgcagtgctgcgctacaccaagctgacagatgct
cagatccttgcaaggttaatgaagattgttgagagagagaatgtacaatacacagatgat
ggactggaagctattatcttcacagcacaaggagatatgagacaggcactaaacaacttg
cagtccacctgttctggatttggctttattaacagtgagaatgtgtttaaggtgtgtgat
gagccacaccctctgctagtgaaggaaatgatacagcactgtgtgaatgcaaatattgat
gaagcatacaagattcttgcccacttgtggcggcttgggtactcaccagaagatatagtt
ggcaatatcttcagagtgtgtaaaaccttccagatgccggagtatctgaaattggagttc
atcaaggaaattggatatactcacatgaagatagcagaaggggtgaattctctcttgcag
atggctggactgcttgccaggctctgtcagaagacggctgctcctgcagaaagttaa
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