KEGG   Lepidochelys kempii (Atlantic ridley): 140899592
Entry
140899592         CDS       T11378                                 
Symbol
NLE1
Name
(RefSeq) notchless protein homolog 1 isoform X1
  KO
K14855  ribosome assembly protein 4
Organism
lkp  Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:lkp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lkp03009]
    140899592 (NLE1)
Ribosome biogenesis [BR:lkp03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    140899592 (NLE1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR75_1st DSE1_N Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR19_1st ASA1 NBCH_WD40 WD40_MABP1-WDR62_1st NLE Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_RIG_2nd CFAP251_N Beta-prop_EIPR1 PAC11 Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_NOL10_N Tricorn_2nd Beta-prop_WDR35_TULP_N eIF2A TRM82_WD WD40_RFWD3 Beta-prop_HPS5 RMC1_N Ge1_WD40 PD40 WDR54 Beta-prop_WDR75_2nd Cytochrom_D1 FAD_binding_9
Other DBs
NCBI-GeneID: 140899592
NCBI-ProteinID: XP_073171467
LinkDB
Position
17:4055230..4068441
AA seq 485 aa
MAGAAQVATMQGDVERLLILFKDEAGEILGSPFDVPIDITPEKLQLVCNALLQKEEPLPL
AFYVHDAEIVTSLENTLAGQVVETERVLDIIYQPQAVFKVRAVTRCTSSLEGHTEAVISV
AFSPTGKYLASGSGDTTVRFWDLSTETPHFTAKGHRHWVLSIAWSPDGRKLASGCKNSQI
FLWDPDTGNQIGRVLAGHSKWITWLCWEPLHINPESRYLASASKDCSIRIWDTIAGRCDK
ILTGHTQSVTCVKWGGDGLLFSSSQDRTIKVWRGQDGILCRTLQGHGHWVNTMALSTDYV
LRTGAFEPAEASVNPQDVSGTLAELKEKAQHRYDQVRGQGPERLVSGSDDFTLFLWAPAE
DKKALERMTGHQALINQVLFSPDTRIIASASFDKSIKLWDGRTGKYLTSLRGHVSAVYQI
AWSADSRLLVSGSSDSTLKVWDAKTRKLAIDLPGHADEVFAVDWSPDGQRVASGGKDKCL
RIWRR
NT seq 1458 nt   +upstreamnt  +downstreamnt
atggctggggctgcccaggttgccacgatgcaaggggacgtggagaggctgctgatcctg
ttcaaagatgaggctggcgagatcctggggtccccctttgacgtgcccatcgatatcacg
cccgagaagctgcagctggtctgcaacgcgctgctccagaaggaggagccgctgcccttg
gccttctacgtccacgatgctgaaatcgtcacgtcgctggagaacaccctggcggggcag
gtggtggagacggagagagtccttgacatcatctaccagccccaggccgtgttcaaagtg
cgggcggtgacgcgatgcaccagctctttggaggggcacactgaggctgtcatctccgta
gccttcagccccaccggaaagtacctggcaagcggctccggtgataccactgtgcgcttc
tgggacctcagcacggagacgccacacttcactgccaaaggtcacaggcactgggtcctc
agcatcgcctggtctcccgatggcaggaagctcgcctcagggtgcaaaaacagtcagata
tttctctgggacccagacacagggaatcagattggcagggtgctcgccggacactccaaa
tggatcacgtggctgtgttgggaaccactccacataaatcccgagagccgctacttggcc
agcgcctccaaggactgtagcatccgcatctgggacaccattgcgggccggtgcgataag
atcctcaccgggcacacgcagtcggtcacgtgcgtgaagtggggtggagacggcctgctc
ttctcctcctcccaggacagaaccatcaaggtctggagaggccaggatggaattctctgc
cgcactctgcagggccacgggcactgggtgaacaccatggctctaagcaccgactacgtt
ctccgcacaggggcctttgaacctgcagaagcctctgtcaacccgcaagacgtgagcggc
accctggcagaacttaaagagaaggcgcagcacaggtacgaccaagtcagggggcaggga
ccggaaaggttagtgtctggatcagatgactttacgctctttctgtgggccccagcagag
gacaagaaggcgctggagagaatgacaggccaccaggcattgatcaaccaagtgctcttc
tccccagacacccggataatagccagtgcttcttttgacaagtccatcaagctctgggac
ggcaggacgggaaaatacctcacctccctgagagggcacgtctccgcggtctaccagatt
gcctggtcggcagacagccgtctgctggtgagcgggagcagtgacagcacgctgaaggtg
tgggatgccaagacgaggaagctggccattgatctccccggccacgcagacgaggtgttt
gcggtggattggagcccagacggacagcgagtagccagcggagggaaagataagtgttta
aggatatggagacgatag

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