Lepidochelys kempii (Atlantic ridley): 140899772
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Entry
140899772 CDS
T11378
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lkp03021
]
140899772 (SUPT6H)
03036 Chromosome and associated proteins [BR:
lkp03036
]
140899772 (SUPT6H)
Transcription machinery [BR:
lkp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
140899772 (SUPT6H)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
140899772 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
140899772
NCBI-ProteinID:
XP_073171913
LinkDB
All DBs
Position
17:1494597..1526634
Genome browser
AA seq
1722 aa
AA seq
DB search
MSDFVESEAEESEEEYNDDGEVVPRVNKKFVEEEDDEEEEEENLDDQDEQGNLKGFINDD
DDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRK
MSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVDAPIAPPEEEEEDEEDESDID
DFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEYEY
EDEEAEGEIRVRPKKTAKKRISRRSIFEMYEPSELENSHLTDQDNEIRVTDMPERFQLRS
IPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSSFSRKGPSTIQKIKEA
LNFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQA
YQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAA
KASRKKHKRMREDGEEAEGEGEDAEDEEQKGPELKQASRRDMYTICQTAGLDGLAKKFGL
TPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPL
VRQVLRQTFQERAKLNIAPTKKGKKDVDEAHYAYSCKYLKNKPVKELRDDQFLKICLAEE
EGLLSIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFL
YVQMAKELKNKLLVEAKEYVIKACSRKLYNWLKVSPYRPDQQVEEDDDFMDENQGKGIRV
LGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEERDKKAQDIETLKKFLL
NKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSRKSEN
EFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYCE
FINRVNEVGVDVNRAIAHPYSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMC
HMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPY
RSPNTEEVFNMLTKETPETFYIGKMITCNVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGM
TVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDAEAADHKQEEDYKRKQQ
RTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHV
DVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLSHKYYQDCSGGDRK
KLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIF
PTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTS
QMFSAIAAVTGQGQNPSATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSY
SYTTPSQPITTPQYHQLQASATPQSTQSQPSSSSRQRQQPKSNSHAAIDWGKMAEQWLQE
KEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtagagagtgaggctgaggagtcggaggaggaatacaacgatgatggg
gaggttgttccgagagtaaacaagaaatttgtggaagaggaagatgatgaagaagaggag
gaggagaatcttgatgatcaagatgagcaggggaacctaaagggattcattaatgatgat
gatgatgaggaagaggaggaggaggaagaagcaagcgactctggtgattcggaggacgat
gttggccacaaaaagagaaaacgcactttcgacgaccgtctggaggatgacgattttgac
ctcattgaagagaatttgggtgttaaagtcaaaagacaaaaattcaggcgtgtgcgaaaa
atgtcagatgatgaggatgatgaagaggaggattatgggaaggaggaacatgagaaggaa
gccattgctgaagaaatcttccaggatggagaaggggaagaggggggcgaggctgttgat
gctcccatagctcccccagaagaagaggaagaggatgaggaagatgaatctgacatcgac
gacttcattgtggatgatgatgggcaacctctgaagaagccaaagtggcggaagaagctc
cctggctacacggatgctgctttgcaagaggctcaggaaatcttcggagtggactttgac
tatgatgaatttgagaagtacaatgagtatgatgaggagctggaggaggaatatgagtac
gaggatgaggaggctgaaggggagatccgtgtccgacccaaaaagactgccaagaagcgc
atcagtcgacgtagcatctttgagatgtacgagcccagtgagctggaaaacagtcacctg
acagaccaagacaatgagatccgcgtgaccgacatgccagagaggttccagctgcgctcc
atccctgtgaagagtgctgaagatgatgaattggaggaagaagctgactggatctacagg
aatgcctttgccacacctaccatctcgctgcaggaaagttctgattacttggaccggggc
caggccagtagcagcttcagccgcaaggggcccagcaccatacagaagattaaagaagcc
ctgaatttcatgagaaatcagcactttgaggtcccattcattgccttctaccgaaaggag
tatgtagagccggagctgcacatcaatgacctctggagggtctggcagtgggatgaaaag
tggacccagctaaaaatccgcaagcagaacctgacccgtctgtttgagaagatgcaggcc
tatcagtacgagcaaatctctgctgatccggacaaacctttggctgatgggataagggcg
cttgataccactgacatggagaggctgaaggacgtgcagtccatggatgagctgaaggat
gtgtataaccatttcttgctgtactacgggcgagacatcccgaagatgcagaatgctgcc
aaagccagccgaaagaagcataaacgaatgcgggaggatggtgaagaggccgaaggggaa
ggagaggatgcagaagatgaggagcagaaggggcccgagctgaagcaggcatcccgcagg
gatatgtacaccatctgtcaaaccgccggactggacggcctggctaagaagtttggtctg
acgcctgagcagtttggagagaatcttcgggacagttaccagcgtcatgagacagagcag
ttcccagcagagccgctggagctggccaaggattacgtgtgtagtcaattcccgacccct
gaggctgtgctggaaggagcccgctacatggtggccttgcagatagcccgagagccactt
gtcaggcaggtcttgagacagactttccaagagagagccaaactcaacattgcaccgacc
aagaagggtaaaaaggatgttgatgaagcccactatgcgtattcctgcaagtacctgaag
aacaagcctgtgaaggagctgcgagatgaccagtttctgaaaatctgcctggctgaggag
gaggggctgctgagcatcgacatcagtattgacatgaaaggcgttgaggggtatggtagt
gaccagacgtattttgaggaaatcaagcagttttattaccgggacgagttcagccaccag
gtgcaggagtggaatcgtcagcgcacaatggccatcgaacgttccctcaaccagttcctc
tacgtgcagatggctaaagagctgaagaacaagctgctggttgaggccaaagaatacgtc
attaaggcttgcagccggaagctgtacaactggctaaaggtgtctccctaccgtccagac
cagcaggtggaggaagacgacgatttcatggatgaaaatcaggggaagggaattcgggtg
ctgggcattgcattctcctctgccagagaccaccccgtgttctgtgccctggttaatggc
gaaggcgaggttacagacttcctccggctgccacacttcaccaaaagacggaacgcctgg
cgggaggaggagcgggacaagaaggcccaggatatcgaaactctgaaaaaattccttctg
aacaagaagcctcatgtggtgacaattgcaggagagaacagggatgcccagatgttgatg
gaggacgtcaagcggattgtgcatgaactggatcaggggcagcagctgtcttccattggg
gtggagctagtggacaatgagctggccattctctacatgaacagcaggaagtcagagaat
gagttccgggattacccccctgtgctgcgccaagctgtctccctggctcgccgcattcag
gaccccctgatcgagtttgctcaggtctgcagctctgatgaggatatcctgtgtctgaag
cttcaccctctgcaggaacatgtggtgaaggaggagctgctgaatgccctctactgcgag
ttcataaaccgtgtgaatgaggtgggagtggacgtaaatcgggcaattgctcacccttac
agccaggccctgctacagtatgtttgtggcctggggccacgcaaagggactcacctgctc
aagatcctgaaacaaaacaacacaaggctggagaaccggactcagctagtcaccatgtgt
cacatgggacccaaggtcttcattaattgtgctggtttcatcaaaattgacacagcatcg
ctgggtgacagcacggattcctacatcgaggtcctagatgggtccagggtccaccctgaa
acctacgaatgggcaagaaaaatggcagtggatgccctagagtatgatgaatcagcagag
gatgccaatccagctggcgctctagaggagatcctggaaaacccagagcgtctgaaagac
ctggatcttgatgcctttgctgaagagctggagagacagggttacggtgacaaacacatc
acgctgtacgacatccgagctgagctgagctgcagatacaaggatctgagaaccccgtac
cgttctcctaacacggaggaggtcttcaatatgctgaccaaagaaacaccagagaccttc
tacataggtaaaatgatcacctgcaacgtgactgggatagcccataggaggccccaaggc
gaaagctacgatcaggccatacggaatgatgagacaggcctctggcaatgtcccttctgt
cagcaggataacttcccggagctcagtgaggtttggaatcactttgacagtggctcctgc
cctggccaggctattggggtgaagacacggctggacaatggggtcactggctttatacca
accaagtttctcagcgacaaggtggttaagcggccagaagaaagggtgaaggtaggaatg
actgttcactgtaggatcatgaagatagacattgagaagttcagtgcagacctgacctgc
aggacgtcagacctgatggataagaacaatgaatggaagctgcccaaagacacttactat
gactttgatgctgaggcagcagatcacaagcaggaagaagactacaagaggaaacagcag
cgcacaacatacatcaagagggtgatcgctcacccgtcattccataatatcagcttcaag
caagctgagaagatgatggagaccatggaccaaggggacgtgatcatccggccaagcagc
aagggggagaaccacctgactgtcacctggaaggtgaacgatgggatttaccagcatgtg
gatgtccgagaggagggcaaggagaacgccttcagtttgggctccaccctttggattaac
acagaggaattcgaggacctggatgaaatcgtcgctcgctatgtccaaccaatggcgtct
tttgctagagacctgctgagtcacaaatactaccaagactgcagtggtggagacaggaag
aaactggaagaacttctaataaagaccaagaaggagaagccaacctttattccttacttt
atctgtgcgtgtaaagagctacctggcaaattccttctcggataccagcctcgagggaaa
ccgaggatagagtatgtgacggtaacaccagagggattccggtaccggggacagatcttc
cctacagtgaatgggctcttccggtggtttaaggatcattatcaggacccagtgccaggt
atcaccccgagcagcagcagcaggacccggacccccgcctccatcaatgctactcctgct
aatattaacctagctgatctgacccgagccgtgaacgcgctgccacagaacatgacctca
cagatgttcagtgccatcgccgcggtgacgggccaagggcagaaccccagtgccacgcct
gcacagtgggcatccagccagtatggctacggaggcagcggagggggcagcagcgcgtat
cacgtctttacaactccagcacagcagccagtggccacccctctgatgacccccagctac
tcctacacaacccccagccagccaattacaacccctcagtatcatcagctgcaggccagc
gctacgccccagtccacccagtcgcagccatcgtccagttccaggcagaggcagcagccg
aagtccaacagccacgctgcaatcgactgggggaaaatggccgagcagtggctccaggag
aaggaggctgagcggaggaaacagaagcagaggctgacccctcgtccatctcccagcccc
atgatcgagagcacgcccatgtccattgctggggacgccacaccacttctggatgaaatg
gatcgatag
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integrated database retrieval system
