Lepidochelys kempii (Atlantic ridley): 140899826
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Entry
140899826 CDS
T11378
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04110
Cell cycle
lkp04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
140899826 (SMC1B)
04114 Oocyte meiosis
140899826 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lkp03036
]
140899826 (SMC1B)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
140899826 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
140899826 (SMC1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
PilZN
Motif
Other DBs
NCBI-GeneID:
140899826
NCBI-ProteinID:
XP_073172099
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All DBs
Position
1:225674368..225738420
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AA seq
1238 aa
AA seq
DB search
MGYLKLLLLENFKSWRGRQSIGPFMKFNCIIGPNGSGKSNIMDALSFVMGERTANLRVKS
VRELIHGAHVGKPFSSTASVKIVYCEENGEEKTFSRIIRGSCSEFLFNDKAVSRSVYTAE
LEKIGIIVKARNCMVFQGAVESIAMKKPKERTQLFEQISNSWEFAEEYDRKKKKMQQAEG
DAQFNYNKKKHVAVERKHAKLEKEEAERYQMLLEELKENRIQLQLFRLYHNEKKIDFLNN
KLGEKNMDVNTKKDSLSSAEDTFKAKKKVLGILNRDQQHMEKEMKTLEASLNQKRPQYIK
AKENTSHQIKKVDMAKKSSKDNEKHLAKQEQNIKELDTELTDVERSWRAYEKKVEEEMLQ
RRADVELEASQLDRYKELKELARKKVATLTQQLEKLQWEQKADLERMTLDERKQKEIEES
IKQVVEQIEDHKKRIQKLEEYTKSCIELLAEKKQQETVLIDEMENSRVQIAQVNEELNKI
VGELQNARIDYHEGRRQQKRAEMLESLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKVFGK
YMSAIVVATEKIARDCIRFLKEERAEPETFLALDYLDIKPINEKLREIKGSKMMIDVVQT
PFTPLKKVIQFVCGNGLVCETVKEARQIAFDGPVRLKTVSLDGTLFLKSGVISGGSSDLK
FKARYWDEKEMKEMKERRDRLIDELKELMKIKRKETDLKQLQAQCQGTQTRLKYSQSELE
NIKKKHLANFYKEKSKLESELVNIKSQYAMLNEGLLQRAEKIEEFQKKMNEVEDAVFQDF
CEEIGVENIRVFEQERVKQQEETDRKRLEFENQKTRLSIQLEYSRGQLQKLLNKIHMLKE
AVRKDEAEIVRLKKDEEEFLLMVNEIMEEQQHLKDRLITLKTEVTKSQNEVEESRKKLLT
LNREMGKLQKEAISIETSLEQKRLERHNMLLECKVQDLRISVLLGSLDEISEVELGTEAE
STEATADIYERERAIQIDYSSLTDDLTDLQSDKEIEAHLTRLQQQIVSKENVLFKTAAPN
LRALEKLQTAKDKFQESVDAFEASRREARICRQEFEQMKKRRYERFSQCFEHVSVAIDQI
YKKLCRNSCAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKSVAALALVFAI
HSFRPAPFFILDEVDAALDNTNIGKVSSFIKEQAQDQCQMIVISLKEEFYSRADALIGVC
PEQDDYMFSQVLTLDLTVYPDADDSERKEQHRYSSTLE
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgggttacctgaagctgctgctgctggagaacttcaagtcatggcgggggcggcagagc
atcggccccttcatgaaattcaactgcatcattgggcccaacggatcaggaaaatcaaac
ataatggatgcccttagttttgtaatgggtgaaagaacagcaaatttaagagtgaaaagt
gttcgagaacttattcatggagcacatgttggaaagccattttcctctactgcaagtgtg
aaaatagtgtactgtgaagagaatggagaagagaaaacattttcaagaatcattcgaggt
agttgttctgagtttcttttcaatgataaagctgttagccgatctgtttacacagcagag
cttgaaaaaataggcataattgtcaaagcaaggaactgcatggtttttcagggagcagta
gagtcaattgcaatgaagaagcccaaggaaagaacccagctttttgaacaaattagtaat
tcatgggagtttgctgaggaatatgacagaaagaagaagaaaatgcaacaggcagagggg
gatgcgcagtttaattataacaagaaaaaacatgtggcagtagaacgcaagcatgcaaag
ttagagaaagaggaggcagagcgttaccagatgctgcttgaagagttgaaagaaaacagg
atacagctgcaacttttccgactttatcacaacgagaaaaaaattgactttttgaacaat
aaattgggtgaaaagaacatggatgtgaataccaagaaagactccctttcttctgctgaa
gacacatttaaagctaagaaaaaagtgcttggaatattaaatagagaccaacaacacatg
gaaaaagaaatgaaaaccctagaagcatcattgaatcagaaaaggccccagtatattaaa
gcaaaggagaacacttctcaccaaatcaagaaagtagatatggctaagaaatcttcaaaa
gataatgagaaacaccttgctaaacaagagcaaaacataaaagaattggacactgagctg
actgatgttgagagaagttggagagcatatgaaaagaaggttgaagaggagatgttacag
agaagagcagatgttgagctggaagcaagtcaactggatcggtataaagagctaaaagaa
ctagcgagaaagaaagtagcgacattgacccagcaactagaaaaactgcagtgggaacaa
aaagcggatctagaaaggatgacacttgatgagaggaagcaaaaagaaattgaggaaagt
ataaagcaagttgtggaacagatagaagaccacaaaaaacgaattcagaagttggaggag
tatactaagtcatgcattgaattgttagcagagaaaaaacaacaggagacagtcctaatt
gatgaaatggagaattcaagggtgcagatagctcaagtaaatgaagaactaaacaaaata
gttggtgagctgcagaatgctagaattgactaccatgaaggaagacgccaacaaaagaga
gcagagatgctggagagtctcaaaagactttatcctgattctgtgtttggaagactgctt
gacttgtgtcatcctatccataaaaaatatcagctggccgttaccaaagtcttcggcaag
tacatgagtgctattgttgtggctactgaaaaaatagcaagggattgcattcgattccta
aaggaggaaagagctgagcctgaaacatttcttgctttggattaccttgatattaagccc
atcaatgaaaaattaagggagataaaaggatctaaaatgatgattgatgttgtacagact
ccatttacacccctgaaaaaagtgattcagtttgtatgtgggaatggtctggtctgtgaa
actgttaaagaagcaagacagatagcatttgatggaccagtgaggttgaaaacagtgtct
cttgatggaactttatttttgaaatctggagttatctctggagggtcaagtgacttgaaa
tttaaagctagatactgggatgaaaaagagatgaaagaaatgaaagaaagaagggatagg
ttgattgatgaactaaaggaattaatgaagatcaaacgtaaggagactgacttgaaacag
ttacaggcacagtgccagggaactcagacccggctcaaatattcgcagagtgaattagag
aatattaaaaagaaacaccttgctaatttctacaaggaaaaatctaagctggaaagtgag
ttagtaaatattaaatcacaatatgctatgctgaatgaaggactgttacaaagagcagag
aaaattgaagagtttcaaaagaaaatgaatgaggttgaagatgctgtattccaagacttc
tgtgaagagattggggtagagaatattcgtgtatttgagcaagaacgtgtgaaacagcag
gaagaaactgacagaaaaagactggagtttgaaaaccagaagacacgattgagcattcag
ctcgaatacagtcgtggccagctacagaagttgctgaacaagatccacatgttgaaggag
gcagttcgtaaggatgaggctgagattgtcaggctaaagaaggatgaggaagaattttta
ctaatggtgaatgaaataatggaggaacaacagcatcttaaggatagattaataacactc
aaaacagaggttacaaaatcccaaaatgaagttgaggaatcaaggaagaaattattaacc
cttaatagggaaatgggtaagttgcaaaaggaagctatatctattgaaacctctctggaa
cagaagagattagagagacataatatgcttcttgaatgcaaggtccaagatttgagaatt
tctgtcttattggggtcactggatgaaatcagtgaagtagagctgggaactgaagcagag
agcactgaggctactgcagatatctatgaaagagagagagcaattcagatagactacagc
agtctaacagatgatctaacggacctacagtctgataaagagattgaggctcatctgaca
cgactgcagcagcaaatagtatccaaagaaaacgttttattcaaaacagctgcaccaaac
ctaagagcattagagaaattgcagacggctaaggacaagttccaggaatcagtagatgct
tttgaggccagcagaagggaagccaggatatgtaggcaagaatttgaacagatgaaaaaa
agaagatacgagcgtttcagccagtgttttgagcatgtctcagtagctatcgatcagatc
tacaagaaactctgcagaaacagttgtgctcaggcattcctcagtcccgagaaccctgag
gaaccatatctagaaggcattagctataactgtgtggctcctggaaaacgctttatgcca
atggacaacttgtcaggaggtgaaaaatctgtggccgcactggctcttgtgtttgcaata
cacagtttccgccctgcccctttctttattttggatgaagtggatgctgcactggataac
acaaacattggcaaagtatcgagcttcatcaaagagcaggcacaggaccagtgtcagatg
atcgttatttctctgaaggaggagttttattccagagcagatgcattaattggagtctgt
ccagagcaagatgattacatgtttagtcaggtactgactctggatcttactgtgtatcca
gacgctgatgacagtgaacgaaaagagcagcacagatacagttccacattggaataa
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integrated database retrieval system
