Lepidochelys kempii (Atlantic ridley): 140899883
Help
Entry
140899883 CDS
T11378
Symbol
RPA1
Name
(RefSeq) LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03030
DNA replication
lkp03420
Nucleotide excision repair
lkp03430
Mismatch repair
lkp03440
Homologous recombination
lkp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
140899883 (RPA1)
03420 Nucleotide excision repair
140899883 (RPA1)
03430 Mismatch repair
140899883 (RPA1)
03440 Homologous recombination
140899883 (RPA1)
03460 Fanconi anemia pathway
140899883 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lkp03000
]
140899883 (RPA1)
03032 DNA replication proteins [BR:
lkp03032
]
140899883 (RPA1)
03400 DNA repair and recombination proteins [BR:
lkp03400
]
140899883 (RPA1)
Transcription factors [BR:
lkp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
140899883 (RPA1)
DNA replication proteins [BR:
lkp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
140899883 (RPA1)
DNA repair and recombination proteins [BR:
lkp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
140899883 (RPA1)
MMR (mismatch excision repair)
140899883 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
140899883 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140899883
NCBI-ProteinID:
XP_073172226
LinkDB
All DBs
Position
17:658785..705429
Genome browser
AA seq
614 aa
AA seq
DB search
MSARLSEGAIAAIMQGENKFKPVLQVINIRAIATGKGPPRYRVLMSDGVNTLSSFMLATQ
LNSLIEEERLSAHCICQVNRYIVNSLKDGRRVIILMDLDVLKTADVVGANIGNPVPYGQG
HQQQRSSVPAASPTHSKPQQQNGNSAVGPTTTKYHGPSKQFGKAGGTSFLSTPGGSQSKV
VPIASLNPYQSKWTICARVTQKGQVRTWSNSRGEGKLFSMELVDESGEIRATAFNDQVDK
FFPLIELNKVYYFTKGHLKTANKQYTAVKNDYEITFHNETSVVPCEDAQHLPSVQFEFVP
ISDLENTCKDSIIDIIGVCKSYEDSTKITVKSTNREVSKRNVHLMDTSGKMVTATLWGDE
AERFDGSRQPVVAIKGARVSDFGGRSLSVLASSTVVVNPDSPEAFKLRGWFDSEGQLLEC
TSISDLRGGPTTGGNTNWKTLHEAKSENLGQGDKADYFSCVGTVVFLRKENCMYQACPSQ
DCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADCQENQWVTCFQESAEVILGQNA
AFLGELKEKNEQAFEEVFQNANFSSYEFRIRVKLETYNDESRIKATVLDVKPVNHKEYSK
RLIMNIRKNAVQLG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcggctgagcgagggggccatcgcggccataatgcagggagagaataaattt
aagcctgtcctccaagtcattaacatccgtgccatagccacagggaaaggcccacctcgt
taccgtgtgctgatgagcgatggggtgaacacactttcctctttcatgttggctacacag
ctgaactctctaattgaagaggagcgcttgtctgcccactgtatctgccaggttaacaga
tacattgttaacagcctgaaagatggaaggagagtgattatattgatggatttagatgtt
ctgaaaacagctgatgtggttggtgcaaatattggcaatccagtaccctatggacagggg
caccagcagcaacgttcctcagttccagcagccagcccaacacacagcaaaccacagcag
cagaatggaaattcagcagtaggccccactactactaagtaccatggcccctcaaagcag
tttggtaaagcaggtggtactagcttcttgagcacccctggtggatcacagtccaaagtg
gtaccaattgccagtctgaacccataccaatccaaatggaccatctgtgctcgtgttact
cagaaaggccaggttcgcacatggagcaactcccgtggtgaaggaaagctgttctctatg
gagctggttgatgaaagtggtgaaattagagctactgctttcaatgatcaagtggacaag
ttctttcccctcattgaattgaacaaggtgtattacttcaccaaaggccatctgaagact
gctaacaagcagtacacagctgtgaaaaatgactatgagatcacattccataatgagact
tctgttgtaccctgtgaggatgctcagcaccttccttcagttcagttcgagtttgtgccc
atctctgacttggagaacacatgcaaagactcaattatcgacataattggagtctgtaag
agctatgaagacagcactaaaattacagtgaagtctaccaatagagaggtgtccaagagg
aatgtgcatttgatggatacatcggggaagatggtgacagctactctttggggagatgag
gctgaaagatttgatggttctagacaacctgtggtagccatcaaaggagccagagtctct
gattttggtggccggagtctctctgtcctggcttccagcacagtcgtggtgaacccagat
agtccagaagcatttaagctccgaggatggtttgactctgaagggcagcttttggaatgt
acctcaatctctgatctgagaggtggaccaacaactgggggaaataccaactggaaaact
ttgcatgaagctaaatctgaaaatttgggacaaggagataaggcagattattttagctgc
gtgggcacagtggtattcctgcgcaaagagaattgcatgtaccaggcatgtccctctcag
gactgcaataaaaaagtgatagaccaacaaaatggactgtatcgctgtgagaaatgcgat
cgtgagttccccaacttcaagtatcgcatgatactctcggtgaacattgcagactgtcag
gagaatcagtgggtgacttgttttcaggagtcagcagaggtcattcttgggcaaaatgct
gctttcttgggagaactgaaagaaaagaatgagcaggcatttgaggaagtgttccaaaat
gccaacttcagctcatacgagttcaggatcagagtcaagttggagacttacaatgatgaa
tctcgtattaaggctacagtactggatgtgaagcctgtgaaccacaaagaatacagcaag
aggttgatcatgaacatcagaaaaaacgcagtacagctaggttga
DBGET
integrated database retrieval system
