Lepidochelys kempii (Atlantic ridley): 140899933
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Entry
140899933 CDS
T11378
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lkp03036
]
140899933 (CHD5)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
140899933 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
140899933
NCBI-ProteinID:
XP_073172318
LinkDB
All DBs
Position
18:complement(22998548..23079052)
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AA seq
2020 aa
AA seq
DB search
MRGPAGAGGEPRGAMESEAELSEEEDGVLEGLEEFYPEEQVTAQKKKKSKKLKENKTSKV
KRRKKEGSNDEISENEEELEEKSESEGSDYSPNKKKKKKLKEKKEKKAKRKKKDEEEDDN
EEGGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSK
MMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPQLSVSPQQSALPMAIRKAK
TKEGKGPGVRKKIKGSKDGKKKGKGKKMTGVKFRFGGIANKRKKGSSSEEEEREESDFDS
ASINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPR
AYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEDEEGGEEEEDDHMEFCRVCKD
GGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWVWREPPAPF
LSGLPPPELELSVPPSKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQR
KNDMDEPPAFDYGSGDEDGKSEKRKNKDPQYVKMEEKYYRYGIKPEWMMIHRILNHSFDK
KGDVHYLIKWKDLPYDQCTWEIDDIDIPYYENLKQIYWNHRELMLGDDIQPPKRLNKKGR
KLKEEKLEKPPETPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILA
DEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK
ESRAVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACL
VVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGF
LEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFIL
TRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSG
KLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAID
RFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVM
IYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD
VEGMMSQGQRITMPDPMTPFPEAPSSKGGAVTPSMKKKHGGTPPGDNKDVEDSSVIHYDD
AAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDY
WEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDE
DEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRW
GMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQH
VLTRIGVMSLVRKKVQEFEHVNGKYSTPDLILEGPEGKKSSEVVSSDPNTPVPASPAHMQ
TGPVAQPDKTEIQLGLQEEKEQLEPKPKKPAESQGPASAEKAENEENQESSRNEEKPRDE
KQEESAKAELSPERLPVRDEAIQAKEKPLEKSELNACQGKGEDKEFKPAEDTKVEEKEQS
ETQQNGEKEEEEDGKKEDKNMNFRFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHR
RHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQ
ALVIEEQLRRAAYLNMSQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLH
KVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRGGDPTVQQGSFA
SSQLYNNNFGPNFRGPGPGGIVNYSQMPLGPYVTGQVGCPQHNVTQEKEGLSVLAPGSWL
TWNRASSVRTELPVCSSVQSSFVMVPFSVARFPVAVFCFG
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atgcgggggccggcgggggccgggggcgagccgcggggcgcgatggagagcgaggcggag
ctgtcagaagaagaggatggagtgctggaagggctggaggaattttatccagaggagcag
gtgactgcgcagaagaaaaagaaatccaaaaagctgaaagaaaacaagacatccaaagtc
aagagaaggaagaaagaggggagtaatgatgaaatatctgaaaacgaagaggaactggag
gagaaatctgagagcgaagggagtgactattcgcccaacaaaaagaagaagaagaagctc
aaagaaaagaaagagaaaaaagccaagcgcaagaagaaagatgaagaggaggatgataat
gaggaaggaggtttaaaggagcccaagagctcagcgcagctaatggaggagtggggcctg
gatgatgtggattatattttctcagaagaagattaccatactctgactaattacaaggct
ttcagtcagtttctcaggcctctcattgccaagaagaatcccaaaatccccatgtccaag
atgatgacagtgcttggtgccaaatggcgagaattcagcgccaacaacccgttcaaaggc
agctcggccgcggcagctgcagccgcagtggcggcagctgtggaaacagtcaccattgca
cctcagctttctgtcagccctcagcagtctgctctgcccatggccatcaggaaagcgaaa
accaaggagggcaaaggtccaggagtgcggaagaaaatcaagggctccaaagatgggaag
aaaaaggggaaggggaaaaagatgacgggcgtgaaattccggtttggaggaatcgccaac
aaaaggaaaaaaggctcatcaagtgaagaggaggagcgggaggagtcggacttcgacagc
gccagcatcaacagctcttcggtgcgctccgaatgctcggcgggcttggggaagagaggg
aagaggaggagaaagaaaaagaggattgaagaaggggatggatacgagaccgaccaccag
gactactgtgaagtctgccagcagggaggggagatcatcctatgcgacacttgtcctcgc
gcctatcacctcgtctgcctggatcctgagctggagaaagcaccggagggcaagtggagc
tgcccgcactgtgagaaggaagggatccagtgggagccgaaggaagaggaggaggaggac
gaggaaggaggcgaagaggaggaggatgaccacatggagttttgccgtgtgtgtaaggat
ggcggggagctgctgtgctgtgacacctgcccgtcttcctatcacctgcactgtctgaac
ccgcctctgccggaaataccaaatggtgaatggctctgcccgcgctgtacatgccctccc
ttaaaaggcaaagtccaacgcatcctgcactgggtctggcgagagccccctgcccccttc
ctgtctgggctccctccgcctgagctggagctgtctgtccctccatcaaagcccctggag
gggatcccggagcgggagttctttgtgaagtgggcaggactctcctactggcattgctcc
tgggtcaaggagctgcagctggagctgtaccacaccgtgatgtatcgcaactaccaaaga
aagaacgacatggatgaacccccggcctttgactatggctctggggatgaagatggcaaa
agcgagaagcggaagaacaaagacccgcagtacgtcaagatggaggagaagtactatcga
tacggcatcaaacctgagtggatgatgattcaccgaatcctgaaccacagctttgataaa
aagggagatgtccactacctgatcaagtggaaagatttaccttacgaccagtgtacctgg
gagattgacgacatagacatcccgtactatgaaaacctgaaacagatttactggaatcac
agggagttgatgttgggggatgatatccaaccgccaaagaggctgaacaagaaagggaga
aaactgaaggaagaaaaactagaaaaacctccagaaactccaattgttgatcctacagtt
aaatttgacaagcagccatggtatattgatgcaacaggaggcaccttgcatccttaccag
ctagagggactgaactggctgaggttttcctgggcccagggaaccgatacgatccttgct
gatgagatggggcttgggaagacggtgcagaccattgtgttcctgtactccctgtacaaa
gagggccactcgaaagggccatatctggttagtgcccctctgtccactattatcaactgg
gagcgagaatttgagatgtgggcacctgacttctatgtggtgacctacacaggggataag
gaaagccgggctgtgatccgagaaaatgagttctcctttgaagacaatgccatccggagt
gggaagaaggttttccgaatgaaaaaagaagctcagattaaattccatgtcctgctcaca
tcctatgagctgatcactattgatcaggctgttttaggctctatagagtgggcgtgtctg
gtggtggatgaagctcacaggctgaagaacaaccaatccaaattctttagggtattaaat
agctacaagattgactacaagctgctgctgaccggaacgccgctccagaacaacttagag
gagctctttcacctgctcaatttcctgaccccggagaggtttaacaacctggaggggttc
ctggaagagtttgctgacatctccaaggaggaccagattaaaaagctccatgacctgttg
ggtccccatatgctccggcggctgaaggccgacgtgttcaagaacatgcctgcgaaaacg
gagctgattgtgagggtggagctcagccagatgcagaagaagtactacaagttcatcttg
acgaggaattttgaagccctgaattccaaaggtggtgggaaccaggtgtcgctgctcaat
atcatgatggatttgaagaagtgctgtaatcacccgtacctcttccctgtggctgctgtg
gaggctccggttttgccaaatggatcctacgatgggaattctttggttaaatcttctggg
aaactgatgctgctgcaaaagatgctgaagaagctgcgagatgggggacacagggtcctg
atcttctcccagatgacgaaaatgctggatttgctggaggatttcctggagtacgagggt
tataaatatgagcggatagatggagggatcacgggaggcctgcgccaagaagccattgac
aggtttaatgctcctggtgctcagcagttctgttttcttctctctactcgagctgggggt
ctgggcataaaccttgcaacggccgacaccgtcattatttatgattctgattggaatccc
cacaatgacatccaggcattcagcagagctcaccgtatcggacagaacaagaaggtgatg
atctaccgcttcgtgacgagagcctccgtggaggagcgcatcacccaagtggccaaaagg
aagatgatgctgacccatttggtcgtccgtccagggctgggctctaagtctggttccatg
actaagcaggagctggatgacattctgaagtttgggaccgaggagctcttcaaagatgat
gtggaaggcatgatgtcgcagggccagcggatcaccatgcctgaccctatgacccccttt
cccgaagcaccgtcatccaaagggggcgccgtgactccaagcatgaaaaagaaacatgga
ggcaccccgccaggggacaataaagacgtggaggacagcagtgtgatccactacgacgac
gctgccatctcgaagcttctggatcggaaccaggacgcgactgatgacacggagctgcag
aacatgaacgagtatctcagctcctttaaagtggcccagtatgttgtgcgagaagaggac
ggtgtggaggaggttgagcgagagatcatcaaacaggaggagaacgtggaccccgactac
tgggagaagctgctcaggcaccattatgagcagcagcaggaggatctggccaggaacctt
ggcaaagggaagaggatccgcaaacaggtcaattacaatgatgcctcgcaagaggaccaa
gagtggcaggacgagctctccgataaccagtccgaatactccatcggctccgaggacgaa
gacgaagactttgaagaaagacccgaaggtcagagtggcaggagacagtcacggaggcaa
ctgaagagcgaccgagacaagcctctgccccctctgctggctagagttggggggaacatt
gaggtgctcggatttaatgcccggcagcgcaaggccttcctgaacgctatcatgcggtgg
ggcatgccgccccaggacgcgttcaactcacactggctggtccgagaccttcgcgggaaa
agcgagaaggagtttagggcttatgtctctttgtttatgagacatttatgtgagcctgga
gcagatggtgctgaaacctttgcggatggcgttccccgagaagggctctcgcgccagcac
gtgttgacgaggataggagttatgtcactagtaaggaagaaggttcaggagtttgaacat
gtcaatgggaagtacagcacccctgatctgatcctggagggaccggaggggaaaaaatcc
agcgaggttgtctcttctgatccaaacacccctgtcccagccagcccagcacatatgcag
actgggccagtggcacagccagacaaaacagaaatacagttggggcttcaagaggaaaag
gaacaattggagccaaagcccaagaagccagctgagagccagggtccagcaagtgcagag
aaagccgagaatgaagaaaaccaagagagctccagaaacgaggagaaaccgagagacgag
aaacaggaagagagcgcaaaggctgagctgtcgcccgagcggctgccggtgagagatgag
gcaattcaggcaaaggaaaagccattggaaaagtcagaattaaatgcctgccaaggtaaa
ggggaagacaaagagttcaagccagcagaggataccaaggtggaagagaaggagcagagt
gagactcagcaaaatggtgaaaaagaggaagaggaggatgggaagaaggaggataaaaat
atgaacttcagattcatgttcaacattgctgatggtggctttacagagttgcacacgttg
tggcagaacgaggagagagctgccgtctcctcgggcaagatctacgacatctggcaccgg
agacatgactactggttgctggcgggaattgttacccatggctatgcccgctggcaggac
atccagaacgacccgcgctatgtgattctgaatgagccattcaagtcggagatacacaag
gggaactacctcgagatgaagaacaagttccttgcccgacggttcaagttactggagcag
gccctggtgatagaggagcagttgcgaagggccgcgtacctcaacatgagccaggacccc
aatcacccggccatggcactgaacgcccgtctggctgaagtggagtgccttgccgaaagc
caccagcatctctccaaagagtccctggctgggaacaagcctgccaatgctgtcctgcac
aaagttctgaaccagcttgaggagctgctgagtgacatgaaggcagatgtgacccgcttg
ccttccatgctgtccaggataccaccagtcgccgctcgcctgcagatgtctgaacggagc
atcctgagtcgtctcactaaccgaggaggggaccccacggtccagcagggctccttcgcg
tcctcccagctctacaacaacaactttgggccaaacttccggggtcctggaccaggtggg
attgtcaactacagtcagatgccgctgggaccttacgtgaccgggcaagttggctgcccc
cagcacaatgtgacacaggaaaaagaagggctgtcagtgctcgctcccggatcctggctg
acctggaacagggcttcttcagtcaggacagagctaccagtgtgttcttctgtccaaagt
tcatttgtgatggttcccttctcagtggctagatttcctgtagcagtgttttgttttggg
taa
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