Lepidochelys kempii (Atlantic ridley): 140900526
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Entry
140900526 CDS
T11378
Name
(RefSeq) protein argonaute-1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkp03019
]
140900526
03036 Chromosome and associated proteins [BR:
lkp03036
]
140900526
Messenger RNA biogenesis [BR:
lkp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
140900526
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
140900526
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
140900526
microRNA pathway
RISC loading complex
140900526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
140900526
NCBI-ProteinID:
XP_073174040
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Position
19:complement(3292485..3340421)
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AA seq
857 aa
AA seq
DB search
MEAGPSGAAAGTYLPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIK
PDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGE
GKDRIFKVSIKWMAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFF
SPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRN
IDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQ
TVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTS
TMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGG
RNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAG
MPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGM
ATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPP
AGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPT
RIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNE
RIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQIL
TYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQAL
AKAVQVHQDTLRTMYFA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaggaccctcgggagcagctgcaggcacttacctgccacccttgcagcaggta
tttcaagcaccacgtcggcctgggataggaaccgtagggaagcctatcaagctcttggcc
aactattttgaagtggacattcctaagattgacgtgtatcactatgaagtggatatcaag
cccgataaatgtccacgcagagtcaacagggaggttgtggaatacatggtgcagcacttc
aaacctcagatctttggagatcggaagccggtgtatgacgggaaaaagaatatctacacc
gtcactgccctgccaatcggaaacgaacgggttgactttgaggtaacgatcccaggggaa
ggcaaagacaggatatttaaggtctccatcaagtggatggcgattgtgagctggcggatg
ctccacgaggccctggtgagcgggcagatccccgtcccactggaatctgtccaggcacta
gatgttgccatgagacatctggcctcaatgaggtacacccctgtgggccgttcctttttc
tcccctcctgaaggttactaccaccctctaggaggaggcagggaggtttggtttgggttc
caccagtcggtcaggcctgccatgtggaagatgatgctcaacattgacgtgtcggcgacc
gccttctacaaagcccagcccgtgattgagttcatgtgcgaagtgctggatatccggaac
atcgacgagcagccaaagcccctgacggactcgcagagggtgcgcttcaccaaggagatc
aaaggtttgaaagtagaggtgacccactgtgggcagatgaagaggaaataccgagtgtgt
aatgttaccaggcgaccagccagtcaccagacgttccccctgcagctggagagtggccag
acagtggagtgtacagtggctcagtacttcaagcagaaatacaacctgcagctgaaatac
ccccacctgccatgtctgcaggtcggccaggaacagaagcacacatatctgcccttggag
gtatgtaacattgtggcaggccagcggtgcatcaagaagctaacggacaatcagacgtca
accatgataaaagcaacagcgagatctgccccggatagacaagaggaaatcagtcgactg
atgaagaatgccagttacaacctggatccgtacatacaggagtttgggataaaggtgaag
gacgacatgacagaagtgacggggagggtccttccagcaccaatcttgcagtatggaggc
cggaaccgagcgatcgccactcccaaccagggtgtgtgggatatgcgggggaagcagttc
tacaacgggatcgagatcaaagtctgggctatcgcctgctttgccccccagaagcagtgt
cgagaggaggtgctgaagaacttcacagaccagctgcgcaagatttcgaaggatgcaggg
atgccgatccaaggccagccatgtttctgcaaatatgcacagggtgcggacagcgtggag
ccaatgttccgacaccttaaaaatacctactccgggctccagctcatcatcgtcatcttg
ccagggaaaacacctgtgtatgcggaggtgaagcgtgtcggagacacgctcctggggatg
gccacgcagtgcgttcaggtcaagaacgtggtgaaaacctccccgcaaaccctgtccaac
ctctgcctcaaaatcaacgtcaagctgggtgggatcaacaacatcctcgtgcctcaccag
cgctcggcggtctttcagcagccagtgatcttcctgggtgcagatgtcactcacccacca
gcgggggatgggaagaagccttccataacggctgttgtgggcagcatggatgcccaccca
agccgttactgtgccacggtacgggtccagcgccctcggcaggagatcattgaggacctg
tcctacatggtgagggagctgctcatccagttctacaagtccacccgcttcaaacccacc
aggatcatcttctaccgggatggggttccagaggggcaactcccacagattcttcactat
gagctgctggcaatccgagacgcctgcatcaaactggagaaggattatcagcccggcatc
acgtacatagttgtccagaaacggcaccacacccgcctcttctgtgcggataagaacgaa
aggattggcaagagcgggaacatcccggctggaacaactgtggatacgaacatcacccac
ccgttcgagtttgacttctacctgtgcagtcatgcaggcattcagggtacgagcagacct
tcccattactacgtcctctgggacgacaaccggtttacagcagacgagctgcagatcctc
acgtaccagctctgccacacctacgtgcgctgcacccgctcagtctccatcccagcacca
gcatattatgccagattggtggcattcagggcacggtaccacctagtggacaaagagcac
gacagcggagagggcagccatatatctggacagagcaatggcagagacccgcaggcgctg
gcaaaggctgtgcaagttcatcaggacactttacgtaccatgtactttgcttga
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