Lepidochelys kempii (Atlantic ridley): 140900663
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Entry
140900663 CDS
T11378
Symbol
ITGA5
Name
(RefSeq) integrin alpha-5 isoform X1
KO
K06484
integrin alpha 5
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03266
Virion - Herpesvirus
lkp04145
Phagocytosis
lkp04510
Focal adhesion
lkp04512
ECM-receptor interaction
lkp04517
IgSF CAM signaling
lkp04518
Integrin signaling
lkp04810
Regulation of actin cytoskeleton
lkp04820
Cytoskeleton in muscle cells
lkp05100
Bacterial invasion of epithelial cells
lkp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
140900663 (ITGA5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140900663 (ITGA5)
04517 IgSF CAM signaling
140900663 (ITGA5)
04518 Integrin signaling
140900663 (ITGA5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
140900663 (ITGA5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
140900663 (ITGA5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
140900663 (ITGA5)
04810 Regulation of actin cytoskeleton
140900663 (ITGA5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140900663 (ITGA5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
140900663 (ITGA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lkp04147
]
140900663 (ITGA5)
04515 Cell adhesion molecules [BR:
lkp04515
]
140900663 (ITGA5)
04090 CD molecules [BR:
lkp04090
]
140900663 (ITGA5)
Exosome [BR:
lkp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140900663 (ITGA5)
Cell adhesion molecules [BR:
lkp04515
]
Integrins
Integrin alpha subunits
140900663 (ITGA5)
CD molecules [BR:
lkp04090
]
Proteins
140900663 (ITGA5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP
RVT_1
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
140900663
NCBI-ProteinID:
XP_073174374
LinkDB
All DBs
Position
20:complement(20057723..20126733)
Genome browser
AA seq
1165 aa
AA seq
DB search
MPPPGTLLPLLLLALQPARAFNLDVAEPALFRGAPGSLFGFAVDFYLPEPQSSISILVGA
PKANTSQLNVTQGGAVYYCPWHQGNSSCTPIEFDQTGSRQHDFSGNGTDGLTQVEFKSLQ
WFGATVRSHGSSILACAPLYSWRTLKDESGRDPVGTCYLSVSNFTKFVEYSPCRSDLDSA
EGQGYCQGGFSAEFTKTGRVLLGGPGSYFWQGQVISATQEQIKEAYYPEYLILGTQGQLQ
TRQAAPIYDDSYLGYSVAVGEFSGDSTEDFVAGVPKGNLTYGYVTVLNGSDMKSLYNFSG
EQMAAYFGYAVAAADVNSDGLDDLLVSAPLFMEKTEDGRVQEVGRVYIYLQQPRGMEPNA
SMVLTGHQEFGRFGSTVVPLGDLDQDGYNDIGIGAPFGGDAQQGVVYVYNGQAGGVNTQP
SQVLKGHWLPSRSPDFFGFALRGAKDLDGNGYPDLIVGAFGVDTAVVYRGRPIVYASASL
NIFPAMFNPEERSCTLEGTDAHVACINLSFCLNASGKHVPDSIGFTVELHLDHLKQKGAI
KRALFLHSRQPHLAQTIKVHNGALEECREMKIYLRNESEFRDKLSSIHVALSFVLDPQAP
ADAHGLQPILNYLTKSYIERKAQIQLDCGEDNICVPDLQLDVFGEHSVVYLGDKNALNLT
FNARNRGEGGAYEAELYVILPAEADYSGVIRNHGNFTNLSCAYESVNRTRMVICDLGNPM
KSGTSLWGGLRFTVPHLRDNKKTIQFEFQIRSKNENNSRSEVVAFPLRVKASARVSSHGV
SKPEAVSFPILGWKPGRNPEKEQDVGPEVQHVYELVNEGPSTISHGVLELSCPVSFQGKP
VMYVTSYLVPANCTSSQPVNPLKLQLEQRPTASPSSEQHYLQRRDAARSSGASGSPHTLK
CPEAECFQLTCQVGLLQRQQRVSLKLYFRIWAKTFQQVSSQTAALGITKCGRDGQPSVEI
EAVRDYLEKLDVHKSMGPDELHPRVLKELAAVIAEPLAIIFENSWRTGEVPDDWKKANVV
PIFKKGKKEDPGNYRPVSLTSVPGKIMEQVLKESILKHLHERKVIRNSQHGFTKGRSCLT
NLIAFYDEITGSVDEGKAVDVLFLDFSKAFDTVSHSILVSKLRKYGLDECTIRKRTSLRP
CSARPCTRSTGCPTRSSPRITPARP
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgccaccccccgggaccctgctgccgctgctgctgctcgccctgcagcccgcccgcgcc
ttcaacctggacgtagccgagccggcgctgttccgcggagccccgggcagcctcttcggc
ttcgccgtggatttctacctcccggagcctcagagcagtatcagcatcctcgttggagct
cccaaggccaacacaagccagctcaacgtcacacagggcggggctgtctactactgtccc
tggcaccagggcaacagcagctgcaccccgattgaatttgaccagacagggtcccgccaa
cacgacttcagcgggaatggcaccgatgggctgacgcaggtggagttcaaatccctgcaa
tggttcggcgcgacagtgcggtcccacggcagctccatcctggcctgcgcccccctgtac
agctggcgcaccctcaaggatgaatctggccgagaccctgttggtacctgctacctgtct
gtcagcaacttcaccaagttcgtggagtattcaccctgccgctcagatctggactcggcg
gaagggcagggttactgccagggtggctttagcgctgagttcaccaagacggggcgagtg
cttctgggaggccctggaagctatttctggcaaggccaggtgatctcagccacgcaggag
cagatcaaggaggcctattaccccgagtatttaatcctgggcacccaggggcagctgcag
acacgccaggccgcccccatctatgacgacagctatctggggtattctgtggccgtcggt
gagttcagcggggattctaccgaagactttgtggctggcgttcccaagggaaacttgacc
tacggctacgtcactgtcctgaatggatcggacatgaagtccctgtataacttctctgga
gagcagatggcggcctactttggctacgcggtggctgctgctgacgtgaacagcgatggc
ctggacgacctgctggtgagtgccccgctgttcatggagaagacagaggacgggcgggtg
caggaggtgggcagagtctacatctacctgcagcagccccgcggcatggagcccaatgcc
tccatggtgctgaccgggcaccaggagttcggccgctttgggagcaccgtcgtcccactg
ggagacctggatcaggatggctataatgacattggcatcggggcgccgttcggcggggat
gcgcagcagggcgtggtgtacgtgtacaatggacaggcaggcggggtgaacacccagcct
tcccaggtcctgaaggggcactggctgcccagccgctcgcctgacttttttgggtttgcc
ctccgcggagccaaggacctggacggaaacggctacccagacctgatcgtgggtgcattc
ggagtggacacggccgtggtgtaccgaggccgccccatcgtctacgccagcgcctccctc
aacatcttccccgccatgttcaaccctgaagagcgatcctgcacgctggagggcaccgac
gcccacgtggcctgcataaacctgagcttctgcctcaacgcctcggggaagcacgtgccc
gactccatcgggttcactgtggagctgcacctggaccacctgaagcagaagggggccatt
aagcgggcgctgttcctgcactcccgccagcctcacctggcacagaccatcaaggtgcac
aatggcgccctggaggagtgcagggagatgaaaatctacctccggaacgagtcggagttc
cgcgacaagctgtcctccatccacgtggcactgagctttgtcctggacccacaggccccg
gcagacgcccacgggctgcagcccatcctcaactacctcaccaagagctacatcgagcgg
aaggcccagatccagctggactgtggcgaggacaatatctgcgtccccgacctgcagctt
gacgtctttggggagcacagcgtggtgtacctgggtgacaagaatgccctgaacctgacc
ttcaacgcccgcaaccgcggggagggtggcgcctacgaagccgagctctacgtcatcctg
cccgctgaggctgactactctggggtgatccgcaaccatgggaacttcaccaacctgagc
tgcgcctacgagtcagtgaaccggacccgcatggtgatctgtgacctcggcaaccccatg
aagtctggcaccagtctctgggggggcctgcgcttcaccgtcccccatcttcgtgataac
aagaagaccatccagttcgagttccagatccggagcaagaacgagaacaactcccgcagc
gaggtggtggcgttcccactccgcgtcaaggcctccgccagggtctcctcccacggggtc
tccaagcctgaggccgtgtccttccccatcttgggctggaagcctggcagaaatccagag
aaggagcaggatgtgggccccgaggtgcagcatgtgtatgagctggtgaatgagggtccc
agcaccatcagccatggggtcctggagctgagctgccctgtgagcttccaggggaaaccg
gtgatgtacgtgaccagctacttggtgccggccaactgcacctccagccagcctgtcaac
ccgttgaagctgcagctggagcagagacccaccgcctctcccagctcggagcagcattat
ctgcagagacgagacgcggcgcggagcagtggggcctccgggagccctcacaccctgaag
tgccccgaggctgagtgcttccagctgacctgccaggtggggttgctgcagaggcagcag
cgggtcagcctgaagctctacttccggatatgggccaaaactttccagcaggtcagctcc
cagactgctgcgctgggcatcacaaaatgcggaagagatggccagccctctgtggagata
gaggcggttagggactatttagaaaagctggacgtgcacaagtccatggggccggacgag
ttgcatccgagagtgctgaaggaattggcggctgtgattgcagagccactggccattatc
tttgaaaactcgtggcgaaccggggaagtcccggatgactggaaaaaggctaatgtagtg
ccaatctttaaaaaagggaagaaggaagatcctgggaactacaggccagtcagcctcacc
tcagtccctggaaaaatcatggagcaggtcctcaaagaatcaatcctgaagcacttgcat
gagaggaaagtgatcaggaacagccagcatggattcaccaagggaaggtcatgcctgact
aatctaatcgccttttatgatgagattactggttctgtggatgaagggaaagcagtggat
gtattgtttcttgactttagcaaagcttttgacacggtctcccatagtattcttgtcagc
aagttaaggaagtatgggctggatgaatgcaccataagaaagagaaccagcctcaggccc
tgcagtgcgaggccgtgtaccaggtccacaggatgccctacaagatccagccccaggatt
accccagcgaggccttaa
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integrated database retrieval system
