Lepidochelys kempii (Atlantic ridley): 140900864
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Entry
140900864 CDS
T11378
Symbol
GLI1
Name
(RefSeq) zinc finger protein GLI1 isoform X1
KO
K16797
zinc finger protein GLI1
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
140900864 (GLI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lkp03000
]
140900864 (GLI1)
Transcription factors [BR:
lkp03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
140900864 (GLI1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
140900864
NCBI-ProteinID:
XP_073174876
LinkDB
All DBs
Position
20:3648634..3694500
Genome browser
AA seq
1387 aa
AA seq
DB search
MREKKDGESFVKGKTNDLCRRWFGILFLIVSLDVTFFSWKEAKCPEKWNFSVEAPKGAIL
GEKTSKRKRKGSFPWSASHQPIPAPKGLAPRGVGGSPRLPGADVPLSVPGARRTMFNARN
PPGSGYMEHCYLHPLHAPGPGLADGLSDFPMCHQANLMGSHHGYGLAPGSEHAGNADGSR
FSTPRGAAKLTKKRALSISPLSDASIDLQTVIRTSPNSLVAFINSRCASASGSYGHLSVG
AISPSLGFQSPMAHPKGQGAAFGPPMPPCGSHEHLPGRPGFLHHPPPRGTPKHCQMKSEP
SLGDALGTKGLEERSEGDDSSPASTGTQDPLLRMLEPREELEKEDGKQEAEAVYETNCRW
EGCSKEFDTQEQLVHHINNEHIHGEKKEFVCHWRECSREQRPFKAQYMLVVHMRRHTGEK
PHKCTFEGCHKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNE
KPYVCKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKHRGDTVLSRALAAPGGPADMKQE
KEGGCPGEGRKDEGKLMVPEATLKPQPSPGGQSSCSSERSPLGSANNNDSGVEMNANPGG
SFEDLSTLEDPPPGEPMGASGLSALRRLENLRIDKFKQLRKPPAGKGLKLPAIPGTGPPG
EMPSLCGPPPAVSHRRVPGLSASDLAPAPALSDRRTSSVSSVSSAYTVSRRSSLASPYPR
APEGLPSSLGLADAYAPLSPDASRRSSEAGRGGGLPGLTPAQQLYLQATYAAATGGPPPA
PLPSTERAALRGRTGFPGDYPGPAVPSFLANGSLRRYSANESPGYSLHPHLAPGHGTRRA
SDPARTAAKPKGQPLKSLGNVSASAVGGLQPLGGSDASLQRHLFSPRPPSISENVFLESV
AMEGPGETSLLEMEQYLGYPEQGFQCQGPGMELQGEGTYIGAHRTMGGMQLNPAAHGELE
GGLGQPDYSLPQCQVNQHFQGMRPPDANIPVPWDEATRGSLEMNPMVPSPVASRHCHHQY
PAPGACEPQPKHMGMCPPGGFAGGQQFGELSQLQIKAEQQLPAPVLTPCQNGTHPAAMQQ
SPAAPFGQRRALPAAPGSGYQAEPQQGSCFAMTPPARRPQPPMPQVKELMVRNYVQSQQA
LMWGEQPQPPPKAGEPMMGLGGGPRHSQPLRHPPAPQPYLSPKYAGYPAKPGHPLGPPEN
QVPASQCFNPELVPHPPGGPKTPSRQNSLVYMGSPGQPSPSGEPPEASPRRLLRLPPLHA
PPEGPANAALLFYPGHGPVQPGKGAQGHQPASCGGQDPGRPYAPGLEGLKPDSFPYLAPE
GQVSNSLDSLDLENTHLDFTAILDDPEPPALSPTRLPPPGPPNMAIGDMSSMLSSLAGES
HFLNTLS
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaaagaaagatggggaaagttttgtgaaggggaagacgaatgatctttgtcgc
cgctggtttgggattttgtttttaatcgtttctctggatgttacgtttttctcctggaaa
gaagcgaagtgccccgaaaagtggaatttcagcgtcgaggcaccaaagggtgcgattttg
ggggagaaaacatcaaaaaggaaaagaaaaggatccttcccttggagcgcaagtcaccag
cccattccggctcccaaaggcctggccccgcggggggtcggaggctccccccgtctgccc
ggagcggatgtgcccctgagcgtgcccggggcccgacggaccatgttcaacgccaggaac
cctcccgggagtggctacatggagcattgttacctgcaccccctgcacgcgcccggcccc
ggcctggcagatgggctgagcgacttccccatgtgccaccaggccaacctgatgggcagt
caccatgggtacgggctggcaccgggcagcgagcatgctgggaatgccgatgggtcccgg
ttctccacaccccgcggcgcggccaagctgaccaagaagcgggcgctgtccatctcgccg
ctgtccgacgccagcatcgacctgcagaccgtcatccgcacctcgcccaactccctggtg
gccttcatcaactcgcgctgcgcttcggccagcggctcctacgggcacctctccgttggc
gccatcagcccttcccttggcttccaaagccccatggctcacccgaaggggcaaggggca
gcgttcggcccccccatgccaccctgtggctcccatgaacacctccccggccggccgggg
ttcctgcaccatcccccgccccgcgggacaccgaagcattgtcagatgaagtcggagccc
agcctgggtgacgccctgggcaccaagggcctggaggagagatcggagggcgacgactcc
agcccagcctccacggggacccaggacccgctgctgcggatgctggagccccgggaggag
ttggagaaggaggatgggaagcaggaggcggaggccgtgtacgagacgaactgccgctgg
gaggggtgcagcaaagagttcgacacccaggagcagctggtgcaccacattaacaacgag
cacatccacggggagaagaaggagttcgtctgccactggcgggagtgctcgcgggagcag
cggcccttcaaggcgcagtacatgctggtggtccacatgcggcggcatacgggcgagaag
cctcacaagtgcacgttcgagggctgtcacaaggcctactcgcgcctggagaacctcaag
acccacctgcggtcgcacacgggcgagaagccgtacgtctgcgagcacgagggctgcaac
aaggccttctccaacgcctcggaccgcgccaagcaccagaaccgcacccactccaacgag
aagccgtatgtctgcaagatccctggctgcaccaagcgctacacagaccccagctccctg
cgcaagcatgtcaagacggtgcatggccccgatgcccacgtcaccaagaagcaccggggt
gacacggtgctgagccgggccctggctgccccggggggccccgccgacatgaagcaggag
aaggaggggggctgccccggcgagggcaggaaggacgaggggaagctgatggtgcccgag
gccaccttgaagccccagcccagtcccggcgggcagtcatcctgcagcagcgagcgctcg
cccctgggcagtgccaacaacaacgacagtggggtggagatgaacgccaacccgggcggc
agcttcgaggacctgtccacgctggaggaccccccgccgggggagcccatgggcgcctcg
gggctctcggccctgcgccgcctggagaacctccgcatcgacaagttcaagcagctgagg
aaacccccggccggcaagggcctgaagctgccggccatccctggcaccggcccccccggg
gagatgcccagcctgtgcggcccgccccccgcggtctcccaccgccgcgtcccggggctc
tccgccagcgacctggcccccgctcccgcgctgagcgaccgccgcaccagctccgtcagc
tccgtcagctcggcctacaccgtcagccgtcgctcctcgctggcctcgccctacccgcgg
gcccccgaggggctccccagcagcctgggcctggccgacgcctacgcccccctctccccc
gacgcctcccggcgctccagcgaggccggccgcggcggggggctgccgggcctgacgccg
gcccagcagctctacctccaagccacgtacgccgcggccacgggcggccccccgcccgcc
cccttgcccagcacggagcgggcggccctgaggggcaggacggggttccccggggactac
ccgggcccagccgtgccgtccttcctggccaacggctccctgcggaggtacagcgccaac
gagtcccccggctacagcctccacccgcacctggcgccagggcacggcacccggcgggcc
agtgaccccgcacggacggcggccaagcccaaggggcagcccttgaagagcctggggaac
gtgagcgcgtcggccgtgggcggcctgcagcccctcgggggctcggacgccagcctgcag
cgtcacctcttctcccctcgcccgcccagcatcagcgagaacgtcttcctggagagcgtg
gccatggaggggcccggggagaccagcctgctggagatggagcagtacctgggctacccg
gagcagggcttccagtgccaggggccgggcatggagctgcagggggagggcacctacatc
ggtgcccacaggaccatggggggcatgcagctgaacccagctgcccatggggagctggag
gggggcctggggcagcccgattactccctcccccagtgccaggtgaaccagcacttccag
ggcatgcgcccgcccgatgccaacatccccgtgccctgggacgaggccacccgggggagc
ctggagatgaaccccatggtgcccagcccggtggccagccggcattgccaccaccagtac
ccggctcccggtgcctgcgagccgcagcccaagcacatgggcatgtgccccccgggcggg
ttcgctggcgggcagcagttcggcgagctcagccagctgcagatcaaggctgagcagcag
ctgccggcaccagtgctgaccccctgccagaacgggacgcacccggctgccatgcagcag
tcgccggcagcccccttcggccagcgcagggccctgccggctgcccctggcagtgggtac
caggccgagccccagcagggctcctgcttcgccatgacccccccggcccggcggccccag
ccccccatgccgcaggtcaaggagctgatggtgcggaattacgtgcagtcgcagcaggcg
ctgatgtggggggagcagccgcagccccccccaaaggccggggagcccatgatggggctg
ggcggggggcccaggcacagccagcccctgcggcaccccccggcgccccagccgtacctc
agccccaagtacgctggctacccggccaagccagggcacccgctgggcccgcctgagaac
caggtcccagccagccagtgcttcaaccccgagctggtgccccacccgcccggcgggccc
aagacccccagcagacagaatagcctggtctacatgggcagcccaggccagcccagcccc
tccggcgagccccccgaggccagtccccgcaggctgctgcggctgcccccactgcacgcc
ccgcccgaaggccccgccaacgcggccctgctgttctaccctgggcacggccccgtgcag
ccggggaagggcgcccaggggcaccagccggccagctgcgggggccaggatcctggcagg
ccgtacgcccccggcctggagggcctcaagcctgactccttcccctacctggcgccggag
gggcaggtctccaacagcctggactcactggacctggagaacacacacctggacttcacg
gccatcctggacgacccggagcccccggccctgagccccacccggctgcctccgcccggg
ccccccaacatggccatcggggacatgagctccatgctgagctcactggctggggaaagc
cacttcctcaacaccctgtcctaa
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