Lepidochelys kempii (Atlantic ridley): 140901572
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Entry
140901572 CDS
T11378
Symbol
NCAM1
Name
(RefSeq) neural cell adhesion molecule 1 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
lkp04514
Cell adhesion molecule (CAM) interaction
lkp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
140901572 (NCAM1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
140901572 (NCAM1)
04517 IgSF CAM signaling
140901572 (NCAM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lkp04131
]
140901572 (NCAM1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lkp04515
]
140901572 (NCAM1)
04090 CD molecules [BR:
lkp04090
]
140901572 (NCAM1)
00536 Glycosaminoglycan binding proteins [BR:
lkp00536
]
140901572 (NCAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lkp00537
]
140901572 (NCAM1)
04091 Lectins [BR:
lkp04091
]
140901572 (NCAM1)
Membrane trafficking [BR:
lkp04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
140901572 (NCAM1)
Cell adhesion molecules [BR:
lkp04515
]
Immunoglobulin superfamily
NCAM1/2
140901572 (NCAM1)
CD molecules [BR:
lkp04090
]
Proteins
140901572 (NCAM1)
Glycosaminoglycan binding proteins [BR:
lkp00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
140901572 (NCAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lkp00537
]
Others
140901572 (NCAM1)
Lectins [BR:
lkp04091
]
I-type lectins (Siglecs)
140901572 (NCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140901572
NCBI-ProteinID:
XP_073176719
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Position
22:15452502..15710947
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AA seq
1119 aa
AA seq
DB search
MLHTKDLLWTLFFLGAAVSLQVDIVPSQVEISVGESKFFLCQVTGEAKAKDISWFSPNGE
KLTPNQQRISVVRNDDFSSTLTIYSANIDDAGIYKCVVTSEEEGDSEATVNVKIFQKLMF
RNAPTPQEFQEGEDAVIVCDVLSSLPPTIMWKHKDRDVVLKKDVRFVVLPNNFLQIRGIK
KTDEGTYRCEGRILARGEVNFKDIQVIVNVPPSVRARQNTMNATANLSQSVTLMCDADGF
PEPAMRWMKDGDLIERGDDDEKYDFNYDGSELTIKKVEKSDEAEYTCIAENKAGKQDAII
HLKVFAKPKITYVENKTAMELEDQITLTCEASGDPIPSITWRTSTRNISNEEKASWTRPE
KQETLDGRIVVHSHARVSSLTLKDIQYTDAGEYVCTASNTIGQDSQAMYLEVQYAPKLQG
PVAVYTWEGNQVNITCEVFAYPSAVISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDS
ENDFGNYNCTAVNRIGQESSEFILVQADTPSSPSIDRVEPYSSTAQVEFDEPEATGGVPI
LKYKAEWRARGEEDWHSRWYDAKEANMEGMITIMGLKPETTYNIRLSAINGKGLGEISPV
SEFKTQPVREPSAPKLEGQIGEDGNSIKVNLIKQDDGGSPIRHYLIKYKAKHSSDWKPEI
RLPSGSDHVMLKSLDWNAEYEVYVIAENQQGKSKPAHYAFRTSAQPTVIPASTSPTSGLG
TAAIVGILIVIFVLLLVAVDITCYFLNKCGLLMCIAVNLCGKSGPGAKGKDMEEGKAAFS
KDESKEPIVEVRTEEERTPNHDGGKHTEPNETTPLTEPEHPADTTATVEDMLPSVTTGTT
NSDTMTETFATAQNSPTSETTTLTSSIALPATAIPDSNSVPPSQATPAKGAATSASSPLA
SSAPKVAPLVDLSDTPTSTPATSNLSSSVLANQGAVLSPSAATSMAEASKAPAGSKPSAP
APANPTSPPASSEPKQELSRTKSPEKEAVQPSMVKSPTETAKNPTNLKSEAASGSTTNPS
QNEDFKMDEGTFKTPDIDLAKDVFAALGTTAPASVASGQARELASSTVDSSVPLAPAKTE
KTPVEEKSEVQATEPKTPPAEVKTVPNEATQTNENESKA
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatactaaggatctcctctggactctgtttttccttggagctgcagtgtctcta
caagtggatattgttccaagtcaagtggagatcagcgtaggagaatccaaattcttctta
tgtcaagtgactggggaggccaaagccaaagacatttcctggttctcccccaacggcgag
aagctgacgcccaaccagcagcgcatctcagtggtgcggaacgatgacttctcctccacc
ctcaccatttacagcgccaacatcgatgatgctggcatctacaagtgtgtcgtcaccagt
gaggaggagggcgactccgaggccaccgtcaacgtgaaaatcttccagaagctgatgttc
aggaatgctcccacccctcaggagttccaggagggggaagatgctgtgattgtgtgtgat
gtgctcagctcgctgcctcccaccattatgtggaagcataaggacagggatgttgtcctg
aaaaaagatgtccgatttgtagtcctgcccaacaacttcctgcaaatccggggaatcaag
aaaacggatgaggggacgtaccgctgtgagggcagaatcctggctcgtggggaggtcaat
ttcaaggatattcaggtcattgtgaatgtgcctccttctgtccgtgctagacagaacacc
atgaatgctacggccaacctcagccagtctgtcaccttaatgtgtgatgctgatggcttt
cctgagccagccatgcgctggatgaaggatggggacctgatagaacggggggacgatgac
gagaaatatgacttcaactatgatggctccgagctgaccatcaagaaggtagagaagagc
gatgaggcggagtacacctgcatcgctgagaacaaggctggaaagcaggatgccattatc
cacctcaaagtcttcgcaaaacccaaaatcacttatgtggagaacaaaactgccatggaa
ctggaggaccagatcacactgacttgcgaggcttcaggggacccaatcccctccatcacc
tggagaacctccacccggaacatcagcaatgaagagaaggcttcgtggactcggcccgag
aagcaagagactctggatgggcggatagtggtgcacagccacgcccgagtgtcctccctg
acgctcaaggacattcagtacacggatgctggagaatatgtgtgcacagccagcaacacc
atcgggcaagactcccaggccatgtatcttgaagtgcaatatgcccccaagctgcagggc
cctgtggcagtctacacgtgggaggggaatcaagtgaacatcacatgcgaggtgtttgct
taccccagtgctgtcatctcctggttccgggatggacagctgctaccaagctccaactac
agtaacatcaagatctacaacaccccatcagccagctacctggaggtgacaccggattcc
gagaatgactttgggaactataactgcaccgcagtgaatcgcatcggccaggagtcctca
gaattcatccttgtgcaagcagatactccgtcctctccttccattgacagagtggagccc
tactccagcactgcccaggtggagttcgatgagcccgaggccaccggtggggtgcccatc
ctcaagtacaaggcggaatggagagcacggggcgaggaggattggcattccaggtggtat
gatgccaaagaagcaaacatggagggcatgatcaccatcatgggcctgaagccagagaca
acctataacatcagactgtcagccatcaatggcaaaggcctgggagagatcagtccggtg
tctgagttcaagacccagccagttcgggaacccagcgcacccaaactggagggccagatt
ggagaagacgggaactccattaaagtgaaccttatcaagcaggatgatggaggctcccca
atcagacactatctgatcaaatacaaagctaagcattcctcagactggaaaccagagatc
agactcccctctggcagcgaccacgtaatgcttaagtccctagactggaatgcagagtac
gaggtctacgtgatagctgagaaccagcaagggaaatccaagcctgcacactatgctttc
aggacttcagctcagcctactgtaatcccagccagcaccagccccacgtcaggcctaggg
actgctgccattgtgggcatcctcatcgttatctttgtgctgctcctggtggctgtggac
atcacctgctacttcctgaacaagtgcggcctgctgatgtgcatcgctgtcaacctgtgc
ggcaagtccgggcccggggccaagggcaaagacatggaagagggcaaagctgccttctca
aaagacgagtcaaaggagcccattgtggaggtgcggactgaggaggagcggaccccgaac
catgacgggggcaaacacacagagcccaacgagaccacgccgctgacggagcctgagcac
ccagctgacaccacagctacggtggaggatatgctgccttccgtaaccacgggcaccact
aattctgacactatgaccgaaacctttgccactgctcagaacagcccgaccagcgagacc
accaccctgacttccagtattgccctgccagccacagctatccctgactcaaactccgtg
ccgcccagccaggccactccggccaaaggggcagccacctccgcttcctcgccactggcc
tcctcggcccccaaagtcgccccccttgttgacctcagcgacaccccaacttctactcca
gccactagtaatttgtcttcgagtgtcctggccaaccagggggcggtgctcagccccagt
gctgccaccagcatggctgaggcctcaaaggcgccagctggtagcaagccgtctgcccca
gcccctgcaaaccccactagccctccagcttcttcagagcccaagcaggagttgtcacgc
accaaaagcccagaaaaggaagctgtacagcccagcatggtgaagagtccaacagaaaca
gccaagaacccaactaacctgaagagcgaggctgcctcaggcagcaccacaaacccctcc
cagaacgaggactttaaaatggacgaagggaccttcaagaccccagacattgaccttgca
aaggatgtttttgcagctcttggcactactgctcctgccagtgtggctagtgggcaagct
cgcgagcttgcttcttccactgtagacagctctgtaccgctggcacctgcaaagaccgag
aaaacccctgtagaagaaaaatctgaggtgcaagcaacggaacctaagacacctccagca
gaagtcaagacggtccctaacgaagccacacaaacaaatgaaaacgagagcaaagcatga
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