Lepidochelys kempii (Atlantic ridley): 140902189
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Entry
140902189 CDS
T11378
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140902189 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkp03019
]
140902189 (CNOT3)
Messenger RNA biogenesis [BR:
lkp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140902189 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
140902189 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
Motif
Other DBs
NCBI-GeneID:
140902189
NCBI-ProteinID:
XP_073178100
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Position
23:13378732..13396611
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AA seq
755 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHI
RMLETILRMLDNDSIQVDSIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHLEDEIFNQSSSTPTSTTSSSPIPPSPANGTAENSEDDKKRGRSTDSEVSQSP
AKNGSKSVHNNHPPPSPAVTPSYQLGSSSSTSSSLGNGPGSSSNGAVSNSSGSGGAKAVP
VAGHTPSTPTPYAQAVAPPPPGANASQPRPPSAQQNASKQNGATSECREEARFKGYSSVV
ADSTSDSVLGSSGPALPSQPVAHNPPSSAAKEPSGAPAPPSASSGLLVPMTVNTPSSPTP
SFSEAKPSQPLLNGPPQFSSTPEIKAPEPLSSLKSMAERAAIGSSIEDPVPSLHLAERAD
ILISSTTSQPASSQPPIQLSEVNIPLSLGVCPLGPVPLTKEQLYQQAMEEAAWHHMPHPS
DSERIRQYLPRNPCPTPPYHHQMPPLHSDTVEFYQRLSTETLFFIFYYLEVQKGPLCRLE
RSIVPPCLAAAAAFPSGRRGEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDE
FEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagaggaaattgcaaggtgagatcgatcggtgtctgaagaaggtctccgag
ggggtggaacagtttgaggatatttggcagaagctccacaatgcagcaaacgccaaccag
aaggagaagtatgaagctgacctgaagaaggagatcaagaagctccagaggctgagggac
cagatcaagacgtgggtagcttcaaatgagatcaaggacaagaggcagctgatagacaac
cggaaactcattgagacgcaaatggagcggttcaaggtggtggagcgggagaccaagacc
aaagcctactccaaggaggggctgggcctggcgcagaaagtcgaccctgcccagaaggag
aaggaagaggtcggccagtggttaacgaacaccatcgacacgctgaacatgcaggtggat
cagtttgagagcgaggtggagtcactctctgtgcagacacgcaagaagaagggggacaag
gataagcaggaccggatcgaggggctgaagcggcacatcgaaaagcaccgataccacatc
cgcatgctggagaccatcctgcgcatgctggacaatgactccatccaggtggactcgatc
cgcaagatcaaggacgacgtggagtattacgtggactcctcgcaggaccccgacttcgag
gagaacgagtttctctacgatgacctcgacttagaagacattccgcaggctctggtagcc
acctccccgcccagccacagccacctggaggacgagatcttcaaccagtccagcagcact
cccacgtccaccacttccagctcgcccatcccgcccagccctgccaacggcacggcggag
aattcggaagatgacaagaagagggggcggtcgacagacagcgaggtcagtcagtctccc
gcgaagaacggttcgaaaagcgtccacaacaaccaccccccgccctcaccggccgtcaca
cccagctaccagctgggcagcagctccagcacctcttcctcgctgggcaacggcccgggc
tccagcagcaacggagccgtgtccaacagcagcgggagcggtggggccaaggccgtccca
gtcgccggccacacgcccagcacccccaccccctacgcccaggccgtcgcgcccccgccc
cccggtgccaacgcctcgcagccccggcctcccagcgcccagcagaacgccagcaagcag
aacggggccaccagtgagtgccgggaggaggcacggttcaagggttacagctccgtggtg
gctgacagcacatcggactccgttctcggcagcagcgggccagcgctccccagccagcca
gtggcccacaacccacccagcagcgctgcgaaagagcccagcggagcccctgcgcccccc
agtgccagctctggcctgctagtccccatgacggtgaataccccaagctccccgaccccg
tccttctccgaagccaagccgagccagccactgctcaacgggccaccccagttcagctcc
acgccagaaatcaaggcgcccgagcccctgagcagcttgaaatccatggcagagcgagca
gccattggatccagtatagaggacccagtgccatctctccacctggctgaaagggcagac
attttaattagtagtacgacctcgcagccggcctccagccagccgcctatccagctgtcg
gaggtgaacatccctctctccctgggggtctgccccctgggaccggtgcccctcaccaag
gagcagctctaccagcaggccatggaggaggcagcctggcatcacatgcctcacccctcg
gactctgagaggatccggcagtacctgccccggaacccctgcccgacccccccttaccac
caccagatgcctccactgcactcggacaccgtggagttctaccagcggctctcgacggag
acgctcttcttcatcttctactatctggaggtacagaagggccccctctgcaggctagag
cgctctatagtcccgccctgtctggccgccgctgccgcctttccctcgggcaggaggggc
gagggtaccaaggcgcagtacctggcggccaaagccctgaagaagcagtcgtggcgattc
cacaccaagtacatgatgtggttccagcggcacgaggagcccaagaccatcacggatgag
tttgagcagggcacgtacatctacttcgactatgagaaatggggccagcggaagaaggaa
gggttcactttcgagtaccggtatctagaagaccgtgacctgcagtga
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