Lepidochelys kempii (Atlantic ridley): 140902399
Help
Entry
140902399 CDS
T11378
Symbol
GATAD2B
Name
(RefSeq) transcriptional repressor p66-beta isoform X1
KO
K23194
transcriptional repressor p66
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140902399 (GATAD2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lkp03000
]
140902399 (GATAD2B)
03036 Chromosome and associated proteins [BR:
lkp03036
]
140902399 (GATAD2B)
Transcription factors [BR:
lkp03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
140902399 (GATAD2B)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
140902399 (GATAD2B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
LIM
FAM76
DUF4004
zf_Tbcl_Rhp7
Spc29
Motif
Other DBs
NCBI-GeneID:
140902399
NCBI-ProteinID:
XP_073178504
LinkDB
All DBs
Position
24:1536528..1616964
Genome browser
AA seq
592 aa
AA seq
DB search
MMDRMTEDALRLNLLKRSLDQADDREDVLAKRLKMEGHEAMERLKMLALLKRKDLSGLEV
PHELPVKQDSVKVYEEKLNGSLRPHADGRTAGRPGKENINDEPVDMSARRSDQDRGRLTP
SPDIIVLSDNEASSPRSSSRMEERLKAANLEMFKGKGIEERQQLIKQLRDELRLEEARLV
LLKKLRQSQLQKENVVQKTPVVQNAASIVQPSPAHVGQQGLSKLPSRPGAQGVEPQNLRT
LQGHSVIRSATNTTLPHMLMSQRVIAPNPAQLQGQRVPPKPGLIRTTTPSMNPAINYQPQ
SSSSVPCQRTTSSAIYMNLASHIQPGTVNRVSSPLPSPSALNDAANSQAAAKLALRKQLE
KTLLEIPPPKPPAPLLHFLPSAANSEFIYMVGLEEVVQSVIDSQGKGCASLLRMEPFVCA
QCRTDFTPHWKQEKNGKILCEQCMTSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRLQQ
QAALSPTAAPAVSSVGKQETIMRHHTLRQASQPQSTLQRGIPTSARSMLSNFAQAPQLSV
AGGLLGMPGVNIAYLNAGIGGHKASSLADRQREYLLDMIPPRSISQSISGQK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagaatgactgaagatgcactgcgcctgaacctcttaaaacggagcttggac
caagcggacgaccgggaggatgtcctggcaaagagattgaaaatggaagggcatgaggcc
atggagcgcctgaagatgctggcgctgctgaagaggaaggatctttctggcctcgaggtg
ccccacgagctcccggtgaagcaggacagtgttaaagtctatgaagagaagctgaatggg
agcctgaggccccatgcagatggcaggactgcagggcggccgggcaaggagaacattaat
gatgagccggtagatatgagcgcaaggagaagtgaccaggacaggggtcgattgaccccc
tcaccagatataattgtcctttccgataatgaggcatcaagtccacgttccagctctcgc
atggaagaaagacttaaggcagcaaatcttgaaatgtttaagggtaaaggcatagaggag
cgacagcagcttatcaaacaactccgggatgagctgagactggaagaggccaggctggtg
ttgctgaagaagctgaggcaaagtcaactgcaaaaggagaatgttgtacagaagactcca
gtggtgcagaatgctgcatctattgttcagccatctcctgcccatgtgggacagcaggga
ctgtccaagcttccctccaggcctggagcccagggggttgagcctcagaatttaagaaca
ttacagggtcacagtgtcattagatctgccacaaacacgacccttccccatatgcttatg
tcacagcgtgtgattgctccgaaccccgcccagttacaagggcagcgtgttcctcctaaa
cctggcctcatccgcactacaactccaagcatgaatccagccatcaactaccagccgcag
tcaagttcttctgttccttgccagcgtacgacttcttcagccatctacatgaaccttgcc
tctcatatccagcccgggactgtgaacagggtgtcgtccccgctccccagccccagtgct
ctgaatgatgccgccaattcccaggcagctgccaagcttgccctgcgcaagcaactggaa
aaaacgctgctggagattccacccccgaaaccgccagcacccttgcttcacttcctgccc
agcgcagccaacagcgagttcatctacatggtgggactggaggaggtggtacagagtgtt
attgacagtcaaggcaaaggctgcgcatcccttctgcgcatggagccctttgtctgtgct
cagtgccgcactgacttcaccccgcactggaagcaggagaagaacggaaagatcctgtgc
gagcagtgcatgacctccaatcagaagaaagcgctgaaggcagagcacaccaaccggctg
aagaacgcctttgtgaaagccttgcagcaggagcaggaaattgagcagaggctacagcag
caggcagccttatctcccactgcagctcctgccgtgtccagtgtcggcaaacaggagacc
atcatgaggcaccacacactccgacaggcttcacagccccagagcactctgcagcgtggc
atccccacctctgcccgctcgatgctgtccaacttcgctcaggcgccacagctgtctgtt
gcgggtggtctcctcggtatgccaggtgttaacattgcatacctgaatgctgggattgga
ggccacaaagcatcaagcttggcagaccggcagcgggaataccttttagatatgatccca
ccccggtctatatcgcagtccatcagcggacagaaataa
DBGET
integrated database retrieval system
