Lepidochelys kempii (Atlantic ridley): 140903045
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Entry
140903045 CDS
T11378
Symbol
MED16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
lkp
Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lkp03021
]
140903045 (MED16)
Transcription machinery [BR:
lkp03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
140903045 (MED16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT140_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_THOC3
DSE1_N
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
140903045
NCBI-ProteinID:
XP_073179799
LinkDB
All DBs
Position
25:complement(11946829..11977400)
Genome browser
AA seq
830 aa
AA seq
DB search
MDLAYVCEWEKRPKSNHCPSIPLVCAWSCRNLIAFTTDLKNEEEKDLTHMIHILDTEHPW
DVYSINSGHIEIITCLEWDQSGSRLLSADADGHIKCWSMTDHLANSWENTVGSMVEGDPI
VALSWLHNGVKLALHVEKSGASNFGEKFSRVKFSPSLTLFGGKPMEGWIAVTISGLVTVS
LLKPNGQVLTSTESLCRLRCRVALADIAFTGGGNIVVATSDGSSTSPVQFYKVCVSVVNE
KCKIDTEILPSLFMRCTTDPARKDKYPAITHLKFLARDMSEQVLLCASNQNSSIVECWSL
RKEGLPVNNIFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVA
NDTKFFPGLGLALAFHDGSVHIVHRLSLQTMAVFYGSSSQRPVDEQAIKRQRAAGPLVHF
KAMQLSWTSLALVGIDNHGKLSMLRISPSMGHVLDMNMSLRHLLFLLEYCMVTGYDWWDI
LLHVQPNMVQNLVEKLHEEYMRQNAALQQVLSTRIVAMKASLCKLSSNTVARVCDYHAKL
FLIAISCTLKSLLRPHFLNTPDKSPGDRLTEICSKITDIDIDKVMINLKTEEFVLEMTTL
QSLQQLIQWVGDFVLYLLASLPNQGSPVRPGHSFLRDGASLGMLRELMVVIRIWGLLKPS
CLPVYTATSDTQDSMSLLFRLLTKLWLCCRDETHPSEPDDTLIDECCLLPSQLLIPNVDW
LPINNGIISKLQNKQLIRLQFGKAPGLIGHTVSSQFDVFVRAPGQPKIDHLRRLHLGAYP
TEECKSCTRCGCVTMLKSPNKTTAVKQWEQRWIKNCLCGGLWRRMPLSYS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggatttggcgtatgtctgtgagtgggagaaaagacctaaaagcaaccactgtccttcc
atcccactggtatgtgcttggtcctgcaggaacctgattgctttcacaacagacctcaaa
aatgaggaggaaaaagatcttacccacatgatccatatcctggacactgagcatccatgg
gatgtttattccattaactctgggcacattgaaatcatcacctgtttggaatgggatcag
tcaggttccaggctcctgtcagcagatgcagatggacacatcaagtgctggagtatgaca
gatcacctggccaacagctgggagaacactgtgggcagcatggtggagggagatccaatt
gtggctctttcctggttgcacaatggggtgaagctagcactgcacgtggaaaagtccgga
gcatcgaattttggcgagaagttttcccgggtcaagttctctccctccctgactctgttt
ggtgggaagcctatggaaggctggatcgctgtgaccattagcggcctggtgacagtctct
ctcctcaagcccaacgggcaagtgctaacatccacggagagcctgtgccgtctgcggtgc
cgtgtcgccctggcggacattgccttcacgggtgggggaaacatcgtggtagccacctca
gatggcagcagcacctctcccgtccagttctacaaggtctgcgtcagcgtagtgaatgag
aaatgcaaaattgacacagagattctgccctcccttttcatgcggtgcaccacagaccca
gcccgcaaggacaagtatccggcaatcactcacttgaaattcctcgccagggacatgtca
gagcaggtgctgctctgtgcctccaaccagaacagcagcatcgtggagtgctggtctctc
cggaaagagggcttgccagtcaataacatcttccagcagatctctcccgtggttggagac
aagcagccgatgatactgaaatggcggattctctccgccaccaatgatttggatcgcgtt
tcagctgtggctttgccgaaactgccaatctccctaaccaatactgatctgaaagtggcc
aatgacaccaaattcttccctggactgggtcttgctttggccttccatgatggtagcgtc
cacatagttcatcgcctgtccttgcagaccatggcagtgttctatggttcttcctctcag
cgcccagtggatgagcaggcgatcaaaaggcagcgggccgccggtcctttggttcatttc
aaagccatgcagctctcctggacttcactggccctggttgggattgataaccatggcaag
ctgagcatgctccggatctctccctccatgggccatgtgctggacatgaacatgtctctc
cgccacttgctgttcctgctggaatactgcatggtgacgggatacgactggtgggatatc
ctgctccatgttcagcccaacatggtgcagaacctggtggagaagctgcatgaggagtac
atgcgccagaatgcagccctgcagcaggttctctccacacgcattgttgccatgaaggcc
tctctctgcaagctttcctccaacactgttgcacgtgtgtgtgactatcatgccaagcta
tttctgatcgccatcagctgcaccttgaaatcgctgctccgcccgcacttcctgaacact
ccagacaagagtcccggtgaccggctcaccgagatctgctccaagattacggacatagac
attgacaaagtgatgattaacctgaagacggaggagtttgtcctggagatgactaccctg
cagtccctgcagcagctcatccagtgggtgggagactttgtgctctatctgcttgccagc
ctccctaatcagggatcccctgtgcggccagggcacagcttcctgcgagacggggcatca
ctggggatgcttagagagctcatggtggtgatccggatctggggcctgttgaagccaagc
tgcctccctgtttacacggcaacctcagatacccaggacagcatgtccctactcttcagg
ctgttgactaaactctggctgtgctgtcgtgacgaaactcacccgagcgagccagacgat
accctgattgatgagtgttgtcttctccccagccagttgcttattcccaatgtagactgg
ttacccatcaataatggcattatcagtaagctgcagaacaagcagctcataaggctgcag
ttcgggaaggcccctggactcattggtcacactgtttcatcgcagtttgatgtctttgtc
agggcacctgggcagccaaaaattgaccacttgagacggcttcacttaggggcatatcca
acagaggagtgcaagtcatgtacccgatgtggctgcgtaaccatgctgaaatcacccaac
aaaaccacagcagtgaaacagtgggagcagcgttggatcaaaaactgcctctgtggggga
ctttggaggagaatgccactcagctactcatga
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