Lepidochelys kempii (Atlantic ridley): 140903093
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Entry
140903093 CDS
T11378
Symbol
HCFC2
Name
(RefSeq) host cell factor 2 isoform X1
KO
K27390
host cell factor 2
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140903093 (HCFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lkp03036
]
140903093 (HCFC2)
03029 Mitochondrial biogenesis [BR:
lkp03029
]
140903093 (HCFC2)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
140903093 (HCFC2)
Mitochondrial biogenesis [BR:
lkp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
140903093 (HCFC2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Beta-prop_TYW4
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
140903093
NCBI-ProteinID:
XP_073179943
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Position
1:251214858..251239279
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AA seq
799 aa
AA seq
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MAAAAAAAGLSWRRVPSSTGPVPRSRHGHRAVAIRELVIIFGGGNEGIADELHVYNTATN
QWFLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNDLYELQASRWLWKKVKPQS
PSVGSPPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNIPRYLNDFYELELQHGSGVIGW
SIPMTKGILPSPRESHTAIVYCRKDLGNPKMYIFGGMCGCRLNDLWELDIETMTWSRPET
KGTVPLPRSLHTANVIGNKMYVFGGWVPQTVEDEISACDGEWKCTSSFSYLNLDTTEWIG
LISDCQEDKKNLLPGPRAGHCAVAVGTRLYIWSGRDGYRKAWNNQVCCKDLWYLDTEKPS
APSQVQLIRATTNSFQVKWDEVPTVEGYLLQLNADSPAPMVTGGTVVPETALLSSQGIKL
DLHSQTNHMVPNNVQVSSNSLLKLEAKENITEPENIVTQEATKKNHLDSRGFKESNAPSL
LPACTLGPQTSANVAELRDLDIRTVNPDASVSSTVSSTQTMVTQQAVKTESSSTNGAVVK
DETSLTTFSSKSEVAETTFIIPSTKVSTGQTNNLTVHLSKTTPLRQMATVKTRERQWYDV
GIFKSSSALVSQYYLLPEEKSSISNEVENTDVPDYSLLKKQDLFPGTVYRFRVAAINGCG
VGPFSKVNEFKTCIPGFPGAPSTVRITKSVDCIHLSWEPPVSPSGNILEYSAYLAIRTTQ
VHENPNQLVFMKIYCGLKTSCVVTAAQLSNAHVDYTSRPAIVFRISAKNERGYGPATQVR
WLQGKVDTKCCVKWDLSAL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgccgccgctgctggcctgagttggaggcgggtcccttcctccaccggg
ccggtgccccgctcccgccacggacaccgcgccgtggccatccgcgagctggtgatcatc
ttcgggggcggcaacgagggcatcgcggacgagctgcacgtctacaacacggctacaaat
cagtggtttcttcctgctgttagaggagatattcctccaggctgtgcagcccatggattt
gtctgcgatggcaccagaatactagtgttcggaggaatggttgaatatggaagatacagt
aatgatttatatgaattacaggcaagtcgatggctgtggaaaaaagtaaaacctcagtct
ccgtctgttggttcaccaccttgtcctcgacttggccacagcttttctttatatggtaac
aagtgttatttatttggtggcctggcaaatgaaagtgaagattcaaacaataacattccc
agatatttaaatgatttctatgaactggagctgcaacatggttctggagtcataggctgg
agcattccaatgaccaaagggatcttgccttctcctcgagaatcccacacagccattgtg
tattgcagaaaagatttgggaaatccaaagatgtatatttttggagggatgtgtggctgt
cgacttaatgacctttgggagcttgacatagaaaccatgacctggtcaagaccagaaact
aaggggacggtgccacttcctcgcagtctccatacagctaatgtaataggaaacaaaatg
tatgtttttggtggatgggttccacagacagtggaggatgagatttctgcttgtgatggt
gaatggaagtgtaccagttcattttcttatctaaatttggataccacggaatggatcggt
ctaatctcagattgtcaggaagacaaaaagaacttgttacccgggccaagagctggacac
tgtgctgtggcagtcggcactcgtctgtacatctggagtggtagagatggttacagaaaa
gcttggaataatcaagtttgctgcaaggacctttggtatttagatacagagaaaccatca
gcaccatcgcaggtacagctgatcagagctacaactaattcttttcaagtaaaatgggat
gaagttcctacagttgaaggatatcttcttcagttaaatgctgactccccagcccctatg
gtgactggtggaactgtggttcctgagactgcactgctgagttcacaaggaatcaagctg
gatcttcacagccaaacaaatcacatggttcctaataatgtacaagtttcatctaattca
ttattaaaactagaagctaaagaaaatattactgaacctgaaaacatagttacacaagaa
gctacaaagaaaaaccatctagattctagaggattcaaagagtcaaatgccccctcactt
ttgccagcgtgcactttaggtcctcagacttcagcaaatgtagctgaattacgtgacttg
gacatacgaactgtaaatcctgatgcttctgtatccagtactgtctccagcacacaaact
atggtaacccagcaggctgttaaaactgagtcatcaagtacaaatggggcagttgttaaa
gatgaaacttcactaacaacattcagttcaaaatctgaagttgctgaaactacttttata
ataccttcaaccaaagtcagcactggtcaaacaaataacttgactgtgcacttatctaaa
actactccactaagacagatggcaacagtgaaaacaagagaacgacagtggtacgatgtg
ggaatttttaaaagcagtagtgctttggtgagccagtactatttgttgccagaagaaaaa
tcaagcatctccaacgaggtggaaaatacagatgtcccagactacagtttacttaaaaaa
caggatctctttccaggcactgtgtacaggttcagggttgctgcaattaatggctgtggt
gtaggccctttcagtaaagtcaatgaatttaaaacctgcattcctggttttcctggggca
ccttcaacggtcagaatcaccaagagtgtagactgtattcatctttcatgggagccacct
gtttcaccttctggaaatatcttggaatattcagcttacttagctattcgtaccacacaa
gtacacgaaaacccaaatcagcttgtatttatgaaaatatactgtggtcttaaaacatca
tgtgtagtgactgctgcacagctttcaaatgcccatgttgattacacctccagacctgct
atagtgttcaggatttctgcaaagaatgagagaggatatggaccagccacacaagttcga
tggcttcaaggtaaagtggataccaaatgttgtgttaaatgggatttatctgcactatga
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