KEGG   Lepidochelys kempii (Atlantic ridley): 140903392
Entry
140903392         CDS       T11378                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
lkp  Lepidochelys kempii (Atlantic ridley)
Brite
KEGG Orthology (KO) [BR:lkp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lkp03036]
    140903392 (KDM4B)
Enzymes [BR:lkp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     140903392 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     140903392 (KDM4B)
Chromosome and associated proteins [BR:lkp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    140903392 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141
Other DBs
NCBI-GeneID: 140903392
NCBI-ProteinID: XP_073180770
LinkDB
Position
25:9654496..9833232
AA seq 1121 aa
MGSENPSPQNPGCKIMTFRPTLEEFRDFGKYVAYIESQGAHRAGLAKVIPPKEWKPRKTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVEEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYDLWKQGKDGAILDHMKPTALTSPELDAWNE
TKPELKAKLLRRMGDEEEDNKHNYRSHRKRSQPRRHKTEDQKSLGEVIAMETALEEVKMK
EELKRGPDLDEEERSKVAEGGEGDSKVRGRPPKVKGERKKKHPHHQHHHHHSHHLQPPQP
PLQQQQQLPPPPPQQQPAGEEAPAARPLIPAAAPASATAEKSLPSAPLNIVLPSEVPSEE
DDFKPRPIIPMLYVVPRTKKVVFEKERISCQQAFEQFATQKGQVWREQVVPLELTVKEEE
SREAENANVATEVSDLQATSAFSKMKMEIKKSRRHPLGKPPTRSPLSVVKQEASSDEETF
PFSGEEDVSDPEALKSLLSLQWKNKAHNFPAERKFNAAAALSEPYCAVCTLFYPYNQSLQ
MDKESVQVSTGESSSLLQLSKCGQKTKPLIPEMCFTSGGENTEPLPSNSYIGEDGTSLLI
SCAKCCLQVHASCYGIRPDLVNEGWSCSRCSANAWAADCCLCNLRGGALQMTTDGRWIHI
ICAIAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSF
HVTCAHAAGVPMEPDDWPYVVSITCFKHKAANHNIQFRREVSLGQTVITKNRNGLYYRCK
VIGMTTQTFYEVNFDDGSYSDNVYPESITSRDCIQMGPPPEGELVQLQWTDGIIYKAKFI
AAQISQIYQVEFEDGSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEGVFSGDEVKAA
KRPRVGNSRNPEDYGQNPDYLAFMETLLQTQYQPGPQSNMF
NT seq 3366 nt   +upstreamnt  +downstreamnt
atggggtctgaaaatccaagtccacagaaccctggctgtaagatcatgaccttccgtccc
accttagaggagtttcgggactttgggaaatatgttgcctacatcgaatcgcagggagct
catagggcagggcttgccaaggtgattcctcccaaggaatggaagccccgaaagacttat
gatgacatcgatgatatggtcatcccagcgcctatccagcaggtggtgactgggcagtca
gggttattcacccagtataatatacagaagaaacccatgacggtgggagaataccggcgt
ctggccaacagtgagaagtactgtactcctcgtcaccaagattttgaagacctggaacgc
aaatactggaagaatctgacgttcgtctcaccaatttatggggcagatatcagtggctcg
ctatatgatgcagatgtagaagaatggaatattgggaatctgaacaccttgttggacatg
gtggagcatgagtgtgggattatcatagaaggtgtgaacaccccctacctttattttggc
atgtggaaaacaacatttgcatggcatactgaggacatggatctctacagcatcaattac
ctgcattttggggagccgaaatcctggtatgccataccaccagagcatggcaagcgattg
gaacgcctggcaaaaggatttttcccaggaagctctcagggatgcgatgccttccttcgc
cacaagatgaccctcatttcaccctccatcttgaagaaatatggcatcccctttgaccgg
atcacccaagaggctggagagtttatgatcacatttccttacggctaccacgcgggattc
aaccacggcttcaactgcgctgagtccaccaactttgccacactgcggtggattgactat
ggcaaaatggctacgcaatgcacgtgccgcaaagacatggtgaagatttccatggatgtt
tttgtgagggttctacaaccggaacgttatgacttgtggaaacaagggaaagatggtgct
attctggaccacatgaaacccacagctctgaccagcccagagctggatgcctggaatgag
acaaagcctgagctgaaagctaagctgctccgcaggatgggagatgaagaagaggacaac
aaacacaattaccggtctcacagaaaaagaagtcaacccagaaggcataaaacggaggat
cagaagtctcttggggaagtcatagctatggagactgccctggaagaagtcaaaatgaag
gaggagctgaaaagagggccagacctagatgaagaggagagaagtaaagtggctgagggg
ggagaaggagacagcaaggtaaggggccgtcccccaaaagtaaaaggtgagagaaagaag
aagcaccctcaccatcagcaccaccaccatcacagtcatcacctgcagccacctcagcct
cctttgcagcagcagcagcagctgccgccaccgccgccacagcagcaaccagcaggggaa
gaggcaccagcagcccggccactgattcctgcagcagcaccagcatcagccacggcagag
aagagcttaccctctgctcccctcaatatcgtcctgccctcagaggtgccaagcgaggag
gatgactttaagccccgacccatcattcccatgctttatgtggttccacggaccaaaaag
gtggtctttgaaaaggagcgcatatcctgccagcaggcctttgagcagtttgccacacaa
aagggccaggtttggcgggagcaggtggtccctttggagctcactgtgaaggaggaggag
agcagagaagcagaaaatgcgaatgttgccactgaggtcagtgacttacaggccacttct
gctttttcaaaaatgaagatggagataaagaaaagtcgccgtcacccactgggcaaacca
ccaacccgctccccattgtctgtggttaaacaggaggcctcaagtgatgaggaaacgttt
ccattttccggggaggaggatgtgagtgacccagaggctttgaagtctttactttccctg
cagtggaagaataaagcacataacttcccagctgagcgaaaattcaatgcagctgctgcc
ctgagtgagccctactgtgctgtctgtaccctcttctacccttataaccagtccttacag
atggataaagagtctgtccaggtctccacaggggagagctcctccttgctccagctttca
aagtgtggacagaagacaaagcctctgatccctgagatgtgttttacctcaggtggtgaa
aacacagagccccttccttcaaactcgtacattggagaagatggaaccagcctcctgata
tcctgtgccaagtgctgcctgcaggttcatgcaagttgctatggaatacgtcctgatctg
gtgaatgaaggctggtcttgttcacggtgctcagccaatgcatgggcagcggactgctgc
ctgtgtaatctcaggggaggagctcttcaaatgaccactgatggaaggtggatccatata
atctgtgctattgctgtcccagaggcccgtttcctcaacgtaatagagcgccatcctgtg
gacatcagtgctattccagaacagcggtggaaactgaaatgtgtgtactgccggaagcgg
atgaagaaggtgtctggtgcttgcattcaatgctcctacgagcactgctccacatccttc
catgtgacctgtgcacatgccgctggggtacccatggagccggatgattggccatatgtt
gtgtccatcacttgcttcaaacataaagcagccaaccacaatatccagtttcggagggag
gtatcgctggggcagactgtgattacgaagaaccgcaatggactctactacaggtgtaaa
gtaattggcatgacaacgcaaaccttctatgaagtgaactttgacgatggctcttacagc
gacaacgtttacccggaaagcattactagcagagactgcattcagatgggaccccctcca
gaaggcgagttggttcagctgcagtggactgatggaatcatctataaggccaagtttatt
gcagcccaaatcagtcagatttatcaggtggagtttgaagatggctcccagctgatggta
aaacgtggtgatatttacacattggaggaggagcttcctaagagagtgaaatctcgcctg
tccctcagcactggggcccctcaggaaggagtgttttccggagacgaagtgaaagccgcc
aagcgcccccgagtggggaattccaggaatcccgaggactatggacagaacccagattac
ttggccttcatggagaccctgctgcagacgcagtaccagccaggaccacagagcaacatg
ttttaa

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