Lepidochelys kempii (Atlantic ridley): 140903878
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Entry
140903878 CDS
T11378
Name
(RefSeq) keratin, type I cytoskeletal 42-like
KO
K07604
type I keratin, acidic
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
140903878
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lkp04812
]
140903878
04147 Exosome [BR:
lkp04147
]
140903878
Cytoskeleton proteins [BR:
lkp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
140903878
Exosome [BR:
lkp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
140903878
Exosomal proteins of other body fluids (saliva and urine)
140903878
Exosomal proteins of colorectal cancer cells
140903878
Exosomal proteins of melanoma cells
140903878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
SPATA1_C
TPR_MLP1_2
DUF1664
Mod_r
Baculo_PEP_C
Ig_TRAPPC9-Trs120_2nd
Ribonuclease_T2
Nsp1_C
DUF7960
Gp58
Phage_GPO
Motif
Other DBs
NCBI-GeneID:
140903878
NCBI-ProteinID:
XP_073181897
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All DBs
Position
27:complement(17333497..17341038)
Genome browser
AA seq
580 aa
AA seq
DB search
MSRSTKTTITSSSVVGGGGGGGHSSSSSRRITSGGSFSGRSYGGGGSRCGYGGGISIGRC
GGGISSGSYGGGISSGSYGGGFGSSCGGFGGFDGSYGGGSFGGGVGCGGVIGFGGGVGFG
GDDTGILSNNEKITMQTLNNRLASYLNSVRALEEQNANLENLIKEWYQKLGPTATLNDYS
HYYGEIEDLNNQIVNSSVDLNKIILNIDNTRMTIEDFKLKYETELGLRQTVEGDISGLRP
LLDQLTLTRSDLELEFETLKEELISLKKNHEEELKGLQPQTSGDVNVEVNATPGCNLTEV
LNDLRNEYEHVIENNRREVEKWYETKITEVNREVHSSGEDIQSSNKQVTELRRDYQNVEI
ELQSYLSTVQSLQSSLADTEDRYNIQLQQIQGLIVSVEEELASIRCEIDNQNQEYRLLLG
IKNQLEQEIAQYRHLLDEGHQDISVPREGAGASLGGGRVIGGGRSGGRTGGSSLTYGGST
GGGRGGERGGSIIGGGGSGGRTETRESVHYTGVSTGGGRGGDISTGDGTGGRSCGITGGG
ERISGASSSSSHSYSSSFGHSASQPCKSGESYAYSRKSFD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtagcactaagactacgattacctcctcttcagttgttggaggtggaggtggt
ggtgggcattcttcaagctcctctagaaggataaccagtggtggaagcttttctggtaga
agttatggtggaggaggttccagatgtggttatggagggggaataagcattggtcgttgt
ggagggggaataagcagtggcagttacggagggggaataagcagcggcagttatggaggg
ggttttggatcaagttgtggtggctttgggggatttgatggcagttatggaggtggcagc
tttggtggaggtgttggctgtggtggagtcatcggctttggtggaggcgttggctttggt
ggcgatgatactggcatcctctccaacaacgaaaagataaccatgcagactcttaataac
cgcctggcttcttacctgaatagcgtgcgagctttggaagaacaaaatgctaatcttgag
aatttaatcaaagaatggtatcagaagctaggtccaactgctacattaaacgactacagt
cactattatggagaaattgaagaccttaacaatcagattgttaattcatctgtggatctt
aacaagatcattctgaacattgataacactaggatgactattgaagactttaaactgaaa
tatgagactgaattgggtctccgccagactgtggaaggtgatattagtggcttacgccct
ctgttggaccagctgaccctaaccaggtctgacctggagttagagtttgaaaccctgaag
gaggaactgatttctctcaagaagaaccatgaggaggaacttaaaggactgcaaccacag
accagtggtgatgttaatgtggaggtcaatgctactccaggctgcaatctgacagaagtg
ctaaatgacctgagaaacgaatacgagcatgtcattgagaacaaccgtagagaggtggaa
aaatggtatgaaaccaagataacagaagttaatcgagaagtccactcgagtggtgaggac
atacagtcaagcaacaaacaggtcacagagctgagacgtgactatcagaacgtggaaatt
gagctgcagtcctacctcagcacggtacaatctttgcagtcctccttggctgacacagaa
gatcgctacaacatacagctgcaacagatccagggccttattgtctctgtggaagaagaa
ctggcaagtatccgatgtgaaatagataatcagaatcaagagtacaggctgctccttggc
atcaagaaccagctggaacaggagatcgctcagtatcggcatctgcttgatgaaggacat
caagacattagtgttccacgagaaggagctggcgcttctttaggaggaggaagagtcatt
ggaggtgggagatcaggaggcagaactggaggaagtagccttacttatgggggtagcaca
ggaggaggaagaggaggtgaaagaggaggaagcatcattggaggtggaggatcaggaggc
agaacagaaacaagagagagtgtccattatactggagttagcacaggaggaggaagagga
ggtgacatttccacaggggacggaacaggaggaagatcgtgtggtataactggaggagga
gaaagaatttcaggagctagtagtagttcttcccactcctattcatcttcctttggccac
tcagcttctcagccatgcaagtctggtgaaagctatgcatactcaagaaaatcctttgat
taa
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