Lepidochelys kempii (Atlantic ridley): 140903936
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Entry
140903936 CDS
T11378
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
140903936 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lkp03036
]
140903936 (HDAC5)
Enzymes [BR:
lkp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
140903936 (HDAC5)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
140903936 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140903936
NCBI-ProteinID:
XP_073182023
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Position
27:11708434..11816810
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AA seq
1123 aa
AA seq
DB search
MLLVPRTLGPPAMLQTIYESESCFSSDGVSGREQSLELLSRTRIHGLPVAAVDVKPALPV
AMPNSCGAGGPAALRPEARGGAPSVDPALREQQLQQELLALKQQQQLQKQLLFAEFQKQH
EHLTRQHEVQLQKHLKQQQEMLAAKRRQELEQQRKREQLRQEELEKQRLEQQLLILRNKE
KSKESAIASTEVKLKLQEFLLSKSKEVTAGSFNHSVPQHSKCWGAHHTSLDQSSPPQTGS
PGTPPSYKLPLLGTYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVIS
TFKKRAIEITVSSVCNSAPGSGPSSPNSSNSTIAENGFAGSAPNIHTEQLLPQHRALAMD
GSASQLSLYTSPSLPNISLGLQATVTVTNSHLNASPKLSTQQEAERHAIQSLRQGGALTG
KFMSTSSIPGCLLGVALEGETNSHGHASLLQHVLLLEQARQQNTLIAVPLHGQSPLVTGE
RGSTNMRTVSKLPRHRPLSRTQSSPLPQSPQALQQLVIQQQHQQFLEKQKQQQQIQLGKI
ITKTGELPRQPTTHPEETEEELTEQQEVLLEDRVPLGPVALVVDGSPESESTQDELEEDE
GGEPVKDDGGASGDEEEPIDSPEVEELGMAYKQVFPDAQQLQPIQLFPASLTIATLPHQA
LSRTQSSPATAGIKTTTAEPPVKHLFTTGVIYDTFMLKHQCMCGNTNIHPEHAGRIQSIW
SRLQETGLLSKCERIRGRKATLDEIQTVHSEHHTLLYGTSPLNRQKLDSKKLLGPISQKM
YAVLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVASGELKNGFAVIRPPGHHAE
ESTAMGFCFFNSVAITAKLLQQKLSVGKILIVDWDIHHGNGTQQAFYSDPNVLYISLHRY
DNGNFFPGSGAPEEVGSGMGVGYNVNIAWTGGVDPPIGDVEYLAAFRTVVMPIANEFSPD
VVLVSAGFDAVEGHLSPLGGYSVTAKCFGHLTKQLMKLAGGRVVLALEGGHDLTAICDAS
EACVSALLGVELEPLDQALLQQKPNVNAVATLEKIIEIQSKHWSSVNRCASVVSCSLLEA
QKGEAEEAETVSAMALLSVDAEQGSTDCSPRQVEEPMEAEPVL
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcgtgcccaggacgctggggccgcccgcgatgttgcagacgatttacgagagc
gaatcgtgtttttcttcagatggggtatccggacgcgagcaatcgctggagctcctttcg
cggactcggatccatggccttcccgtggcagcggtcgacgtgaagccggcgctgcccgtg
gccatgccgaactcctgcggcgccggcggcccggcggccctgcggccggaggcccggggc
ggtgcgcccagcgtggaccccgccctgcgggagcagcagctgcagcaggagctgctggcc
ctgaagcagcagcagcagttgcagaagcagctgctcttcgccgagttccagaagcagcat
gagcacctgacgcggcagcacgaggtccagctgcagaagcacctcaagcagcagcaggag
atgctggcagcgaagcggcggcaggaactggagcagcagcgaaagcgggagcagctgcgg
caggaggagctggagaagcagcggctggagcagcagctcctcatcctccggaacaaggag
aagagcaaagagagtgcaattgccagcacagaagtgaagctaaagctccaggagttccta
ctcagcaagtcaaaagaggtgacggcaggcagcttcaaccattccgtcccacagcactcc
aaatgctggggagcccatcatacctcgttggaccagagttcccctccccagacaggcagc
ccgggaacaccaccctcctacaaactacccctactcggcacatacgacagcagagatgac
tttccgctccggaaaaccgcctcggaacccaacttaaaagtgcgctcgcggttaaaacag
aaggtggccgagcgcaggagcagccccctgctgcggaggaaagacgggaccgtcatcagc
acgttcaaaaagagagccatcgagatcacggtctcctctgtgtgcaacagtgccccaggg
tccggtcccagctccccgaacagctccaacagtaccatcgctgagaatggcttcgctggc
tctgcccccaacatccacaccgagcagctgctcccccagcacagagccctggcaatggac
gggtccgctagccagctcagcctctatacctccccgtcactgcccaacatctccctggga
ctgcaggcaacggtcaccgtgaccaactcgcacctcaacgcttccccgaagctctccacc
cagcaggaggcggagcgccacgccatccagtcgctgcgccagggcggggccctcacgggc
aagttcatgagcacctcgtccatccccggctgcctgctgggggtcgccctggagggcgag
accaacagccacgggcacgcctccctgctgcagcacgtgctgctcctggagcaggcccgc
cagcagaacacgctgatcgccgtgccgctccatggccagtccccgctggtgacgggcgag
cgcggctccaccaacatgcggacggtcagcaagctgccccggcaccgcccgctgagccgc
acccagtcgtccccgctgccccagagcccccaggccctgcagcagctcgtcatacagcaa
cagcatcagcagttcctggagaagcagaaacagcagcagcagatccagcttggcaagatc
atcaccaagacgggcgagctgccccgccagcccaccacgcaccccgaggagacggaggag
gagctgacagagcagcaggaggtgctgctggaggacagggtgcccctggggccggtggcc
ttggtggtggacggctcgccggagagcgagagcacgcaggacgagctggaggaggacgag
ggcggcgagccggtgaaggacgacgggggcgcgagcggggatgaagaagagcccatcgac
tcaccggaggtggaggagctgggcatggcttacaagcaggtgttcccagacgctcagcag
ctgcagcccatccagctcttcccagcttccctgacaattgccaccctgcctcaccaagcg
ctgagccggacccagtcctcgcctgccaccgcgggcataaagaccactacggctgaaccc
ccggtcaaacacctattcactaccggcgtgatctatgacacgttcatgctaaagcatcag
tgtatgtgcgggaacactaatattcacccagagcatgctgggagaatccagagcatctgg
tccaggctccaggagaccggcttgctgagcaagtgcgagaggatccggggcaggaaagca
acgctggatgaaatccagacggtccattcggagcatcacacgttgctctatggaaccagc
cccctcaaccggcagaaactcgacagcaagaagctgctaggtcccatcagccagaagatg
tatgcggtcctgccctgtggcggcatcggggtggacagcgacacggtgtggaacgagatg
cattcgtccagcgccgtccgcatggccgtgggctgcttggtggagttagccttcaaggtg
gcctcgggagagctcaagaatggattcgccgtcatccggcccccggggcaccacgcggag
gaatcgacggccatgggcttctgcttcttcaattccgtcgcgatcactgccaaactcctc
cagcagaagctaagcgtcggcaagatcctcattgtggactgggacattcaccacggcaat
ggcacccagcaagccttctacagtgaccccaacgtgctgtacatctccctgcaccgctac
gacaacggcaacttcttcccaggcagcggggcccccgaggaggttggcagcgggatgggg
gtggggtacaacgtcaacatagcctggacaggcggagtggacccccccatcggagacgtg
gagtacctggccgcgttcaggacggtggtgatgccgatagccaacgagttctccccggac
gtggtcctggtctctgccggcttcgacgcagtcgagggacacctgtctcccttgggcggc
tactccgtcacggcgaaatgtttcggacacctgaccaagcagctgatgaagctggctgga
gggcgcgtggtgctggctttggagggaggacacgacctgacagccatctgcgatgcctca
gaagcctgtgtctccgccctgcttggcgtggagctggaacccctggatcaagctctcctg
cagcaaaagccaaatgtaaatgccgtggccacgctggagaagattattgaaatccagagc
aaacactggagctctgtgaaccgctgtgcctcagtggtcagttgttccttgctggaggcg
cagaagggagaagccgaggaggcagagacagtaagtgccatggcattgctctcggtcgat
gccgaacaaggaagcacagactgcagccccagacaagtggaggagccgatggaggcggag
cctgttttgtga
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integrated database retrieval system
