Lepidochelys kempii (Atlantic ridley): 140904075
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Entry
140904075 CDS
T11378
Symbol
SNF8
Name
(RefSeq) vacuolar-sorting protein SNF8 isoform X1
KO
K12188
ESCRT-II complex subunit VPS22
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140904075 (SNF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lkp04131
]
140904075 (SNF8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lkp04147
]
140904075 (SNF8)
Membrane trafficking [BR:
lkp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
140904075 (SNF8)
Exosome [BR:
lkp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
140904075 (SNF8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
EutK_C
RPA_interact_C
Plasmid_RAQPRD
Activator-TraM
Phage_Mu_Gam
Motif
Other DBs
NCBI-GeneID:
140904075
NCBI-ProteinID:
XP_073182440
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All DBs
Position
27:13385423..13396501
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AA seq
258 aa
AA seq
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MHRRGVGAGAIAKRKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK
NPQFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIVEVCLALKHRNGGLIT
LEELHQQVLKGRGKFAQHVSQDDLIRAIKKLKVLGSGFGIIPVGGTYLIQSVPAELNMDH
TVVLQLAEKKGYVTVSEIKSSLKWEMERAKHVLEHLLKEGMAWLDTQAPGESQYWLPALF
TELYSQEITPEEAKEALP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggcgcggggtgggggcgggcgccatcgccaagaggaagctggcggaggccaaa
tacaaggagcgagggacagtgctggctgaagaccaactggcacagatgtctaagcaactg
gacatgtttaagaccaacttagaagagtttgccagcaaacacaagcaagagattcgtaaa
aatccccagtttcgggtccagttccaggacatgtgcgcaaccatcggagtggatccattg
gcatctggtaaaggattctggtcagagatgctgggagttggagatttctactatgagctg
ggtgttcagattgttgaagtttgtctggctctgaaacacagaaatggaggtctcataacc
ctggaggaacttcatcagcaagtgctaaagggaagagggaagtttgcccagcatgtcagc
caggacgatctcatccgagctatcaagaagctgaaggttctgggcagtggctttgggatt
attcctgttggagggacatatctgatccagtctgtaccagctgaactgaacatggatcac
acagtggttttgcagctggctgagaaaaaggggtatgtaactgtcagcgagatcaagtcc
agtttaaagtgggagatggaacgtgccaagcatgtgctggaacacctgctgaaggaaggc
atggcctggcttgacacacaagctccaggggaatctcagtactggctgcctgctctcttt
acagaactttactctcaggaaatcactccagaggaagcaaaggaagcactaccctga
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