Lepidochelys kempii (Atlantic ridley): 140904559
Help
Entry
140904559 CDS
T11378
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03013
Nucleocytoplasmic transport
lkp03015
mRNA surveillance pathway
lkp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140904559 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
140904559 (ACIN1)
03015 mRNA surveillance pathway
140904559 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkp03019
]
140904559 (ACIN1)
03041 Spliceosome [BR:
lkp03041
]
140904559 (ACIN1)
Messenger RNA biogenesis [BR:
lkp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
140904559 (ACIN1)
Spliceosome [BR:
lkp03041
]
Complex C
Other components
EJC/TREX
140904559 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
140904559
NCBI-ProteinID:
XP_073183062
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MGSRVWGDSIGTTNEGLRLGEIPLLPSTGDRAWRRSHCRHQWQRAWEDHTAAVLRERGAW
GIPLPPQTTEALMLENLQKHSTLHATFQPNSQSKGWNPGILPPHPLISLQIGEEMSQNSF
IKQYLEKQHELLQQRLQREAREAAELEASGKSYPISRERNDSDEEGTRRQERRSTRVRQA
RAAKAPEGTQAVGLEEREATPRGRRSAPQPALKLEEEEEEEEEEEEDDDEEEEEEDEEDE
EEAKDPEGKESSRGMGEAWPPGPQASSSPQEIRGSWQEKGGLMAPTLQQTRVPRSPAPQE
VGGPRSPALQEVGGPEAQGMGGPRSPGPQGRGSAQVPMPLETEGPGGPEPQERGVTRPSE
PQGSWTAVTPAPQEKGEPSPPAPQEKGEPSLPDLQEKGECSPMVPQKEEEPSLPSPHKKR
EPSLPSPHEKGEASPTAPQAKGEASSPAPQAKGEASPTAHQEKDSPEKKGAAGVQDDKGA
PQEEAEGPPEISQEGGASATPGSPAPPQLSEGEAPMVPPGEDEPPPPLLTKEPPPSQKRP
SGAHPASPSPPPQRRRRGGSNSDSDSDSTSSGSHCRRSESPTRKRQASRSSSSSSRKSRS
PDALWAGPSSPRTKEPSPAGQQEAPESPMAEGRPAPSPPPAPQRRPSHGHRHSPLSQQGS
SETPGGPARAVPTGDPPRQAEQRQPTNNQEEKEEVPMELEPHQAGASPPAGPPAQPPGPD
ERPDGGPEDEERKEAAAQHKAFKRKISVVSAAKGAAAGNSDTEGGQSGGRKRRWGASTAT
TQKKPSISITTESLKSLIPEMKPVAGQEAVVDLHADDSRISEDEGERHGEPPAHEKGLKI
CRTVTQVVPAEGQENGQGEEEEEEEKEPEEEQPEAPQVTAELPLPPPVEHEVKKVTLSDT
LTRRSISQQRSGVSITIDDPVRTAQLPSPPRAKPSPIVHICNLVRPFTLGQLKELLGRTG
TLVEEAFWIDKIKSHCYVTYCTVEEAVLTRNALHGVKWPQSNPKFLSADFAEQDELDFHR
GLLPERVVEAAAAAPGAGPAGGRGGRRSAPRERSREPERAVREQWAEREREMERRERTRA
EREWDRDKVREGPRSRSRERRRKEPPKAKEKKGEKKEKAPEEPPAKLLDDLFRKTKAAPC
IYWLPLTDTQFVQKQAERAARARERERRRKELEEEELRQRERSRQAERDKRREHSRERGA
GGAPGAAGGAERGGRERREAKRHSRSRSRSTPVRDRGGRR
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcagggtttggggagattccattggtaccacaaatgaggggttgaggcttggg
gagatcccactgctaccatcaacaggggacagggcttggaggagatcacactgccgccac
caatggcagagggcttgggaagatcacactgccgccgtcctcagggagcgtggggcttgg
gggatccccttgccaccacaaaccacagaggccctgatgcttgagaacctccagaagcac
tcaaccctgcacgccaccttccagcctaactcccagagcaagggatggaacccaggcatc
ctgccccctcatcctctcatctccctgcagatcggcgaggaaatgagccagaacagcttc
atcaagcaatacctggagaagcagcacgagctgctgcagcagcggctgcagagggaggcg
cgggaggcagccgagctggaggcctctgggaagagctaccccatctcccgggagagaaac
gactccgacgaggaggggaccaggaggcaggagcgccgctccaccagagtcaggcaggcc
agagctgccaaggccccggagggtacccaggccgtggggctggaggagcgggaggcgacc
ccaaggggccggaggagtgcgccacagcccgccctgaagctggaggaggaagaagaggag
gaggaggaggaggaggaagacgacgatgaggaggaggaagaggaggacgaggaggacgag
gaggaagcaaaggatccagaggggaaggagtcttcccgggggatgggggaagcctggccc
ccaggccctcaggcaagcagctcaccccaggaaatcagggggtcctggcaggagaagggg
ggcctcatggccccaacactccaacagacaagagtgcccagatccccagcaccccaggaa
gtgggggggcccagatccccagcactccaggaagtggggggccctgaggcccagggaatg
gggggccccagatcaccagggccccaaggaagggggtcagcccaggttccgatgcccctg
gagacagaggggcccggaggtcctgagccccaggaaaggggggtgaccaggccctcggaa
ccccagggaagttggacagctgtgactccagccccccaggagaagggggagcccagccca
ccagcccctcaggagaagggggagcccagcttgccagacctccaggaaaagggggagtgc
agcccaatggtcccccagaaagaggaggagcccagcctgccctccccccacaagaagagg
gagcccagcctgccctccccccacgagaagggggaggccagcccgacggccccccaggca
aaaggggaggccagctcaccggccccccaggcaaaaggggaggccagcccgacggcccac
caggagaaggattccccagagaagaagggagcggctggggtccaggatgacaagggggcc
ccccaggaggaggcagaggggccccctgagatctcacaggaagggggggcatctgcaacc
cccggctccccagcccctccccagctgtcagaaggggaggcaccgatggtccctcctggg
gaggatgagccccctccccctctgctgaccaaggagcccccccccagtcagaaaaggcca
tcaggggcccacccagcatcaccttcccctcccccccagcgccggcggaggggtgggtcc
aactcagactccgactcagactccacctcctccgggtcccactgccgccgctccgagtca
cccaccaggaagcgccaggcctcgcgctccagctccagcagcagcaggaagtcgcgcagc
cctgacgccttgtgggctggccccagttccccacgcaccaaagaaccctccccagcagga
cagcaggaggcgccggagagtcccatggcagagggcagaccggccccctcgcccccaccg
gccccccagagacgccccagccacgggcaccggcacagcccgttgtcacagcagggcagc
tcagagaccccggggggcccagccagggcagtgcccacgggggacccaccgcgccaggca
gagcagaggcagcctacgaataaccaggaggagaaggaggaggtgcctatggagttggag
ccccaccaggccggcgccagccccccggccggcccccctgctcagccccccggccctgat
gagcgccccgacgggggccccgaggacgaggagaggaaagaggctgcggcgcagcacaaa
gccttcaagaggaagatctccgtcgtgtcagcggccaagggggcagcagcggggaacagt
gacacggagggcggccagtcgggggggcgcaagcggcgctggggggccagcacggccacc
acccagaagaagccgtccatcagcatcaccaccgagtcgcttaagagcctgatccccgag
atgaagccggtggcggggcaggaggcggtggtggatcttcacgccgatgactcccgcatc
tcggaggacgagggggagcgccacggggagccgcccgcccatgagaaggggctcaagatc
tgccggacggtcacacaggtggtgccagccgaggggcaggagaatgggcagggcgaggag
gaggaggaggaggagaaggagcccgaggaagagcagcccgaggccccgcaggtcacagca
gagttaccgctgcccccgcccgtggagcatgaagtcaagaaagtgacactcagtgacacc
ctgacgcgccgctccatcagccagcagcgctcgggcgtctccatcaccatcgatgaccct
gtgcgcacggcccagctcccgtcgcccccccgcgccaagcccagccccattgtgcatatc
tgcaacctggtgcggcccttcacgctgggccagttgaaggagctgctgggccggacgggg
acactagtggaagaagccttctggattgacaagatcaaatcacactgctacgtcacatac
tgcacggtggaggaggctgtgttgacccgcaacgccctgcacggggtgaaatggccccag
tccaaccccaagttcctgtccgccgacttcgccgagcaggatgagctggacttccaccgg
gggctgctgccagagcgggtggtggaagcagcggcggcggccccgggggctgggccagcc
ggagggcgcgggggccggcgctcagccccccgagagcgctcgcgggagccggagcgggcg
gtgcgggagcagtgggcggagcgggagcgcgagatggagcggcgggagcgcacacgggcc
gagcgcgagtgggaccgcgacaaggtgcgcgaggggccccgctcccgttcccgcgagcgc
cgccgcaaggagccacccaaggccaaggagaagaagggcgagaagaaagaaaaggcccca
gaggagccccccgccaagctgctggacgatctcttccgcaagaccaaggccgccccctgt
atctactggctgcccctgactgacacccagttcgtgcagaagcaggcggagcgggcagcc
cgggcgcgggagcgtgagcggcgccgcaaggagctggaggaggaggagttgcggcagcgg
gagcggagccgccaggccgagcgggacaagcgacgggagcacagccgggagcggggggcc
gggggcgccccaggggcggcaggcggtgctgagcgggggggccgggagcgccgggaggcc
aagaggcacagccggagccggagccgcagcaccccagtgagggaccgcggggggcgccgc
tga
DBGET
integrated database retrieval system
