Lepidochelys kempii (Atlantic ridley): 140906217
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Entry
140906217 CDS
T11378
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
140906217 (SCRIB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_13
LRR_9
LRR_LRWD1
PDZ_Tricorn
SUIM_assoc
Motif
Other DBs
NCBI-GeneID:
140906217
NCBI-ProteinID:
XP_073185816
LinkDB
All DBs
Position
2:complement(403969..642627)
Genome browser
AA seq
1987 aa
AA seq
DB search
MLRCMPPLWRCNRHVEALDRRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLL
NLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSR
LPEGFTQLRSLGHLALNDVSLQSLPSDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQL
DLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPSEV
SGLMALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLAAVTESIGDCENLSELILTEN
VLTALPKSLGKLTKLTNLNVDRNRLTALPSEIGGCASLNVLSLRDNRLVLLPPELASTTE
LHVLDVAGNRLQNLPFALTNLNLKALWLAENQSQPMLKFQTEDDKTGEKVLTCYLLPQQP
SPSLENLLQNSVDESWTDTNLNRVSVIQFLDEPKADDDEEAGAEKRGLQRRATPHPSELK
VMKKVIEVRRNEVYSAKPDVDLDSPNSEEKRLSAMSNRSEDSHVSNSTVSANFREEEEEG
GGGDRLNGQVPKSQELENEAKSGAEEEQEVEAVAGQEEELEVEYNEPTVHFAEDTLIRSE
DEEEDEDRPFPVEKQRLIRKDTPHYKKHFKITKLPKPEAVVALLQGLNSDRVPEEEELVG
CNNNAEPEEQEEAWDKDDMKNGALSTQPSVKGVSFDQANNLLIEPARIEEEELTLTILRQ
TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALHRAEHH
VAVEALRGSGSSVSMMVLRERMVEPENAITVTPLRPEDDYSPREPRGGLRFPERPEGAPP
TDRFSTCLMRNEKGLGFSIAGGKGSTPYRAGDTGIFISRIAEGGAAHRDGTLHVGDRVIS
INGVDMTEARHDQAVALLTASSPTIALLVEREGAQQLSEGDSPVVQRVRTHSPPPPPSHG
ESTPEETPLLQRNHLPKCLEDQYPIEEICLVKAGGPLGLSIVGGSDHSSHPFGIHEPGVF
ISKVIPHGLASRSGLRVGDRILEVNTIDLRHATHQEAVNALLSSTQELSMLVRRDPPPPG
MQEICIEKAPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDGRLKVGLRI
LEVNHQSLLGMTHTEAVQILRSVGDKLLVLVCDGFDPKAAAAIEMSPGIIANPFAAGIGR
KNSLESISSIDRDLTPEELEILQKEMEMVREATQWEREEMEKVERMRREREAATQLLEEE
AESISSEPLRLDYRTLAALPSNNSPRVTRALVQCDRASPGMESDCALLPLPVALDSQNSD
PDPIAGLSRSVTSPPQDPASPGKHTERAALVPLHMPEPVGCPLTQNQLPKPQEPEQESMV
DSQPILFSENPFVVANRRGKAAGKACLGGPPLGYGQGGVLKTNLYSKAPAGESEPGSSRR
DASYSPSSQQPPAALRPAHLSGRETRFAAINFIPPQDDSKSQTKPGVIQPLSRVRQNAAP
PSSEGRDSPNPFQQPESCSSVQNSLRPPSPPSPEDVPVNVKQAYKTFAAVPLSQANKETH
GQTSTEKPKASPEMMSSRGLHSPEQRSFRERQKYFEIEVKQQQVEKPPKRVSLVGEDDLK
KMKEEEARKLQQKRALLLEEEEEEEEEDVGKQMPDMSMQSSVIIEGVEYKIKRLNGRSIQ
SPATRISEADEHSSSQRNSLEEGFRPEQRPNSMSGLIPVYPGGGETGAPVRTAKAERRHQ
ERLRMQSPEFLSTQEKELSPAERRALEAEKRAMWRAARSSTLEDSIKQYEQDLARKLYQS
RQRAPAPGARPAQVSSPVQSHVSRTPGSGSQSRMKSLEQDALKAQMVIAKSKEGKKRSTL
EQLAESPSPAPTPSPTLPEDCSHRNVTSPGRLSMSEKKFDYREFAAIPSSKPVHEIQSPE
AAGNLRYVDDTNSTVPQDQDEPAEEEELLVTHDSSTPTTSALEEMALYSSKRKLRHSRRS
LEAAVPT
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgcatgccgccgctgtggcgctgtaaccggcacgtggaggcgctggaccgg
cggcactgctcgctgcaggccgtgcccgaggagatctaccgctacagccgctcgctggag
gagctgctgctggacgccaaccagctgcgggagctgcccaagcctttcttccggctcctg
aacctgcgcaagctaggcctgagtgacaatgagattcagaggcttccccccgaggtggcc
aacttcatgcagctggtggagctagacatctctcgcaatgacattccagaaatccctgaa
agcatcaaattctgcaaatccctggagattgctgacttcagtgggaatcccctctccagg
cttcctgagggcttcacccagctgcggagtctgggccacctggccctgaatgatgtgtcc
ctgcagagcctccccagtgatatcgggaatttggcaaatctggtgactctggagctgcgt
gagaacctgctcaagtccctccccacttcgctctcattccttgtcaagttagagcagttg
gatcttggtggcaatgacctggaagtgctgccagacactctgggagcattaccaaacctg
cgggagctctggctagaccgaaaccagctctcggccctgcccccggagctggggaatctt
cggcgcttggtctgtctggatgtgtctgagaacaagctggagcagctgcccagtgaggtc
agcgggctgatggcactgacagacctactgctgtcacagaaccttttggaatgcatacct
gatgggattggtcagctgaagcagctttccatcctaaaagtggatcagaatcggctggct
gcggtgactgagtcgattggggactgtgaaaatctctcggagctcatcctgacagagaat
gtgctgacagccttgccaaaatccctggggaagctgacaaagttgacaaatttgaatgtg
gaccggaaccggctgacagcgcttccctctgagattgggggctgtgccagtctgaatgtt
ctgtccctgcgtgacaaccgcctggtgcttctgcctccagaacttgccagcaccacagag
ttgcatgtgctggatgtggcagggaacaggctgcagaatttgccctttgccctgacaaat
ctcaacctgaaggccctgtggcttgcagagaaccaatcccagcccatgctgaaattccag
acagaagatgataagacgggtgaaaaggttctcacctgttacctgctgccccagcagccg
tctcccagtctagagaatctcctgcagaacagcgtggatgaaagttggacagacaccaac
ttgaaccgggtcagtgtgattcagtttttggacgagcccaaagctgatgatgacgaggag
gctggagctgagaagagaggcctgcagcgcagagcaactcctcacccgagtgagctgaag
gtcatgaagaaagtgatcgaagttcggcgcaatgaggtatattctgcgaagcctgatgtg
gacctggattctccaaactcagaggagaagaggctgagtgccatgtccaatcgcagcgag
gactcgcatgtctccaacagcactgtctctgccaacttcagggaggaagaggaggagggg
ggagggggagacaggctgaatgggcaagtgcccaaatcacaggagctggagaatgaggcg
aagtctggagctgaagaagagcaagaggtggaggcagtggctggtcaagaggaggagctg
gaagtggagtacaatgagcccacagtgcattttgctgaggacactctgatccggagcgag
gatgaggaagaggatgaagaccgcccgttcccagtggagaagcagcggctgatccgcaag
gacacaccgcactataagaaacactttaagatcaccaagctgcccaagccagaggcagtg
gtggcgctcctgcaggggctgaacagtgacagggtccctgaggaggaggagctggtgggc
tgcaataacaatgcagagcctgaggagcaggaggaggcctgggacaaggatgatatgaag
aacggagccttgtccacgcagccgtcagtcaagggggtgtcgtttgatcaagccaataat
ctgctgattgagcctgctcgcattgaggaggaagagctgaccctgactatcctgcggcag
acgggggggctgggcatcagcatcgcagggggcaaaggctccactccctacaagggtgat
gacgagggcatctttatttcccgtgtgtcggaggagggccctgcagcccgagcaggagtc
cgtgtcggggacaagctcctggaggtgaacggagtggccctgcaccgtgcagagcaccac
gtggcagtggaggcgctgcgtggctcaggcagctccgtctccatgatggttcttcgggag
cggatggtggagcctgagaacgccatcacggttacaccgctgcgccccgaggatgattac
agcccacgagagccacggggcggccttcgttttccagagcgacctgagggggcaccaccc
acggacagattctccacctgcctcatgcgcaatgagaaggggctgggcttcagtattgct
gggggcaagggctccacgccctaccgggcaggtgacacggggatctttatctcgcggatc
gcagagggtggtgcggcccatcgggacgggacgctgcacgttggagaccgggtcatctcg
atcaatggggtagacatgacagaagccaggcatgatcaggcagtagcgctgcttaccgca
tcctcccccaccatcgcgctgctggtagagagagagggtgcacagcagctcagcgaggga
gactcaccagtggtacagcgagtgcgcacgcactccccaccaccacctcccagccatggg
gagagcacacccgaggagacgcctctgctacaaaggaaccatctgcccaaatgcctggag
gatcagtaccccatcgaggagatctgtctggtcaaagctggggggcccctggggctcagc
attgttggaggcagtgaccattcaagccacccgtttgggattcatgaaccaggtgtcttt
atctcaaaggtcattccccatgggctggcatcccgcagtggcctgcgagtaggggacagg
atcctggaggtgaatactattgacctgcgccatgctacccaccaggaggctgtgaacgcc
ctgctgtccagtacacaggagctgagcatgttggtgcgacgagatcctccgccacctggc
atgcaggaaatctgcattgagaaggctcctggagaaaagctgggcatcagcattcggggg
ggagcgaaaggccacgctgggaacccctttgaccccaccgatgagggcattttcatctcc
aaggtgagctcctctggggctgctgccagggatggccggctgaaggtggggctgcggatt
ctggaggtgaatcaccagagcctgctgggaatgacgcacacagaggcagtgcagatccta
cgcagtgtgggtgacaagctccttgtgcttgtgtgtgatgggtttgaccccaaagccgca
gctgccattgagatgtccccaggaatcattgccaacccctttgccgctggcattggccgc
aagaacagcctggaaagcatctcctccattgaccgtgacctgaccccagaggagctggag
atcctacaaaaggagatggagatggtgagggaggcgactcagtgggagagagaagaaatg
gagaaagtggagaggatgcgtagggagcgggaggcagccacgcaactccttgaggaggag
gcagagagcatcagcagtgagcctttgcgactggactatcggaccctggcagctttgccc
agcaacaactcaccaagagtcacccgtgctctcgttcagtgtgatcgagccagccctgga
atggagagtgactgcgctctgctgcctctgccagtggctctggacagccagaattcagac
cctgacccaatcgcaggcctgagccgcagtgtaactagcccgccccaggacccagcatca
cctggcaagcacacagaaagggcagcgctggtcccgctacacatgccggagcctgtgggc
tgccccctaacccagaaccagctgccaaagccacaggagccagagcaagagagtatggtc
gactcccaaccaatcctcttcagtgagaacccctttgtggtggctaatcgaagggggaag
gcagcaggcaaggcctgtctggggggccctccccttggctatggccaggggggagttctg
aagaccaacctttactccaaggctccagcaggcgagtctgagcctgggagctccaggcgg
gatgcctcttactcaccgagcagccagcagccacctgcagcccttcggcctgctcacctg
tcaggcagggagactcgctttgctgccataaacttcatcccaccgcaggatgacagcaaa
tcacagaccaagccgggcgtcattcagcctctctcccgtgtgcgacaaaacgcggcccca
cctagttcggagggcagggacagccccaaccccttccagcaacctgagtcatgctccagt
gtccagaactctctgcgtcccccctctcccccctctcctgaggatgtcccagtcaatgtc
aagcaggcatacaagacctttgcagcggtgcccctgtcgcaggcaaataaggagacgcac
ggtcagacaagcaccgagaaacctaaagcttctcctgagatgatgtcgtccaggggactg
cacagcccagagcagcgatccttccgtgagaggcaaaagtactttgagatcgaggtgaag
cagcagcaggtggagaagccccccaagcgtgtctccctggtgggggaggatgacctgaag
aaaatgaaggaggaggaagctcgtaaactgcagcagaaacgggctctgctgttggaggag
gaggaggaggaggaagaggaggatgtggggaagcagatgcccgatatgagcatgcagtcc
agtgtcatcatcgaaggagtggagtacaagatcaagagactaaatggaaggagcatccag
tccccggcaactcggatctctgaggcggacgagcacagcagctcccagagaaactcactg
gaagaaggattcaggcccgagcagagacctaactctatgtctggactgatcccagtttac
ccaggagggggcgagacaggggcacctgtgcgaacggccaaagctgagcgacggcaccag
gagcgattgcggatgcagagccctgaattcctgagtacccaggagaaggagctgtctcca
gctgagcgccgggccctggaggcagagaaacgagccatgtggagggcagcacgatcctcc
actcttgaagacagtattaaacagtacgagcaggatctggccaggaagctctaccagtcc
cgacagcgggcacctgcaccaggggccaggccagctcaggtgtctagcccagtgcagagt
cacgtctcaagaacccctgggtcaggaagtcaatccaggatgaagtctctggagcaggat
gccctcaaagcccagatggtgattgccaagtccaaggaggggaagaagcgcagcacactg
gaacagctggctgaatcgccttcacctgctcccaccccgtccccaacgcttccagaagat
tgcagccacaggaatgtcacttcaccagggaggctgtccatgtctgaaaagaagtttgac
taccgggaatttgccgctattccttcttccaaacctgttcacgaaattcagtcacccgaa
gcagctggcaatctcagatacgtggatgacacaaatagcacagttccccaggatcaggat
gagccagcagaggaagaggagctgttagtaacgcatgactcctcgacacccaccacatca
gcacttgaagaaatggctctgtacagcagcaagcgcaaactccgacacagccgtcgcagt
ctggaggctgctgtccccacatag
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integrated database retrieval system
