Lepidochelys kempii (Atlantic ridley): 140906291
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Entry
140906291 CDS
T11378
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp04217
Necroptosis
lkp04622
RIG-I-like receptor signaling pathway
lkp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
140906291
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
140906291
04625 C-type lectin receptor signaling pathway
140906291
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lkp01002
]
140906291
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lkp04121
]
140906291
Enzymes [BR:
lkp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
140906291
Peptidases and inhibitors [BR:
lkp01002
]
Cysteine peptidases
Family C67
140906291
Ubiquitin system [BR:
lkp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
140906291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
DZR_2
Motif
Other DBs
NCBI-GeneID:
140906291
NCBI-ProteinID:
XP_073186043
LinkDB
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Position
2:complement(4124443..4149668)
Genome browser
AA seq
796 aa
AA seq
DB search
MTTTVLPGSPLPSQGDGNVYYILTDDFPYGSKLFHAGSMCFLKERNYLHSIACGPTSTRF
LRVTMLDDNSITTIDPEILQPVKEEEAVFLLAINILNERLNCFLDRCSLEAAVKATVGQQ
VVVDLNQQQFTGTIRYIGKISKSPLSSPLCPSYFGVELQGDGEGRGHSDGTYNVSEYFKC
KQNHGLFLPLNKIRFIPALGGDPAREEPKPDVDKVVPVKAGDTIGFYLDDVFRQGIAMDV
YKEGTQWLVKVCPEEEGPTDVFRDIPMDSVVKEGLLSPAFEPDMALGSQRQMKRERSESG
EELESRKQSLDVNSMVQITLDKGNPVSGIIRWLGYMPKIEHKMAGVELDEEKGVTDGEWL
GTRYFHCPPKRGLFVKLQSCQPDMRFQCVSSGLLDPSTSISFISVAGQMNSPQVLANFPP
LRNGTAVHVLQGRMKGIQGHCNSCYMDAALFSLFSCTSVLDSMLFKPSLPPEGHIQKILR
DEIVNPLRRNGFVAANSVMHLRQQLTEKGQCSSFATSEKDPEEFLNLIMHHILGIEPLLK
LQSGGQKEQECYYYQIFIDQQEELVVPNVQQLVEHSFLSSNLKLVEIPSCFIIQMPRFGK
EYKMFSKIIPSLELDITDLLLDSPRECFVCGDVATQECSECFKDKMFAVTGMKQYCKSCC
RQAHSHYRRKAHRPTKLHIPEEFQGRSHVDSPRIPRERMELFAVLCIETSHYVSFVKYGP
EKENWLFFDSMADRHGDENGFNIPIVTLCPEVAKYLQLPVAALAMEQPRDMEGVAKRLFC
DAYMYMYQSKKMALYK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgactacaacagttttaccaggcagccctctaccttcacaaggggacggaaatgtttat
tacatcttgacagatgattttccatatggcagcaagctctttcacgccgggagcatgtgc
ttcctcaaagagaggaattatttgcacagtatcgcctgtggcccgacttccactcgtttc
ttgagggtcaccatgctggatgacaattccataaccactatcgatccagaaattcttcag
cctgtgaaggaggaggaagctgttttccttctggccatcaacatcctcaatgaacgcttg
aactgtttcctggacaggtgtagccttgaagcagcggtgaaggctacagtgggtcaacag
gtggtggtagatctcaaccaacaacagttcactggcaccatccgctacattgggaagatc
agcaagagccctttgtcctccccgctctgtccgtcctactttggggtggagttacagggt
gatggtgaaggcagaggccacagtgatggcacctataacgtctctgagtatttcaagtgt
aagcagaaccatgggctctttctgccgcttaacaaaatccggtttatcccggcgctgggc
ggcgacccagcgagagaggagcccaaaccagatgtggacaaggttgttcctgtaaaagca
ggggacacaattggcttctacctggatgatgtcttcagacaaggcatagctatggacgtg
tacaaggagggaacccagtggcttgttaaagtttgcccggaagaagaaggaccaacagat
gttttcagggacatccctatggattctgttgtgaaggaagggctgctctccccagcattt
gagccagacatggccctgggatctcagagacaaatgaagcgagagagaagcgagagtgga
gaggaattggaaagtagaaaacaatccctggatgtgaactccatggtacagatcacctta
gacaaggggaatccagtctctggaatcatccgctggttggggtacatgcccaaaattgag
cacaaaatggcaggagttgaattagatgaagagaagggggtcacagatggcgaatggcta
ggcacgcgctacttccactgccccccaaagcggggcctctttgtgaagcttcagtcatgc
cagcccgacatgcgcttccagtgtgtgagcagtggcctcctggaccccagcacttccatt
tcttttatttctgttgcaggtcagatgaatagtcctcaggttctggctaattttcctcct
ctcaggaatggcacagccgtgcatgttttacaagggcgcatgaaaggaattcaaggccat
tgcaactcctgctacatggatgctgctcttttcagcctcttctcctgcacttctgtgctg
gactccatgctcttcaagccctccctcccgcccgaggggcacatccagaagatcctccgg
gatgagattgtgaatcccctccgacggaatggctttgttgccgctaatagcgtgatgcat
ctaaggcagcagttgacggagaagggccagtgctcgagctttgccacgtctgagaaagac
cctgaggagtttctcaatctcatcatgcatcacatcctgggaatagagccactcctgaaa
ctgcagtctggaggccagaaggagcaggagtgctactattaccagatattcatagaccag
caagaggagctggtcgtgcccaacgttcagcagttagtggaacattccttcctgtcttcc
aatctcaagctagtggagatcccctcctgtttcattattcaaatgccacggttcgggaag
gaatataaaatgttcagcaaaatcattccctccctggagctggacatcaccgacctgctg
cttgacagtccccgggagtgcttcgtgtgcggggacgtagccacccaggagtgttccgag
tgcttcaaagacaagatgttcgcagttaccgggatgaagcagtactgcaagtcctgctgc
agacaggctcattctcattaccggcgcaaagcacacaggccgacaaaactgcatatccct
gaggagtttcagggcaggagccacgtggacagcccccgaatcccacgggagaggatggag
ctctttgcagtgctctgcatagagaccagtcactatgtctcctttgtgaagtacgggccg
gagaaagagaactggctgttcttcgacagcatggctgacaggcacggtgatgagaatggc
ttcaacattcccattgtaacgctgtgccctgaagttgccaaatacttgcaattgccagtg
gcagcactggctatggagcagccccgggacatggaaggcgtggccaaacgcctcttctgt
gatgcctacatgtacatgtaccagagcaagaagatggcactttacaaatga
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