Lepidochelys kempii (Atlantic ridley): 140907084
Help
Entry
140907084 CDS
T11378
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lkp Lepidochelys kempii (Atlantic ridley)
Pathway
lkp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lkp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140907084 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lkp03019
]
140907084 (DROSHA)
03009 Ribosome biogenesis [BR:
lkp03009
]
140907084 (DROSHA)
03036 Chromosome and associated proteins [BR:
lkp03036
]
140907084 (DROSHA)
Enzymes [BR:
lkp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
140907084 (DROSHA)
Messenger RNA biogenesis [BR:
lkp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
140907084 (DROSHA)
Ribosome biogenesis [BR:
lkp03009
]
Eukaryotic type
90S particles
RNase
140907084 (DROSHA)
Prokaryotic type
rRNA processing factors
140907084 (DROSHA)
Chromosome and associated proteins [BR:
lkp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
140907084 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140907084
NCBI-ProteinID:
XP_073188360
LinkDB
All DBs
Position
2:123986509..124085691
Genome browser
AA seq
1331 aa
AA seq
DB search
MSFHSGRGCPRGRGGPGVRTSTQTFRPQNLRQLHPQQPSVQYQYDQQVAPPTTYSSPPAT
GYVPPRPDFIPYPSLVPPSTQSPISQCPLRPPFPNHQVRQSFPVPPCFPPAPPPVPNPSN
SPVPGAPTGQNTFPYMMPPPAMPHPPPPPVMPQQVNYQPVYSTGYSQQSFPPPNFNSYQQ
NSNSFQSSSSSSHFRHASQYQVEKAQSERRSPERSKHYDEHRHREHSHVHGDRHRPSNHG
DRRGDRGRSPDRRRQESSRHRSDYDRGRTPPRHRSYERSRERERERHRHRDSRRSPSSER
SYRKDYKRTGSRSPSRERKRPRWEEERERWSENQSASKEKNYTAIKDKEPEEIISEKNEE
EEEELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSRLRDLYERFEEELGKRQAKAKAA
RPPWEPPKTKLDEDLESSSESDCDSDDNSTCSSSSDSEVFDVIAEIKRKKAHPDRLHEEL
WYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEPIKPCRPMTNNAGRLYHYRITVSPPT
NFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPENFCV
RGLELFSLYLFRDILELYDWNLIGPSFENNSCCPRFHFMPRFVRFLPDGGKEVLSMHQIL
LYLLRCNKPLVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLDREQFN
PDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKLSQREE
ALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLMHLDKLI
GYTFQDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMRKKGIN
TLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLATYRTAI
VQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSLEEAKHL
FGRLLFNDTDLQEVWLNYPLHPLQLQESNTDRQLIETSPVLQKLTEFEEAIGVIFTHVRL
LARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVN
NRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNV
CFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVY
FKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRWEREHQE
REPEETEEVRK
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattctggacgaggatgcccacggggtcgaggaggacctggagtaagaacg
tcaacacaaaccttcagacctcagaacctgagacagcttcaccctcagcagccttcagtg
cagtaccaatatgaccaacaagtagctcctccgactacctactcaagccctccagccaca
ggctatgtgcctcctagaccagattttataccgtatccgtccctggtacctccttcaact
cagagtccaatcagccagtgtccgctgaggccaccttttccaaaccatcaagtaaggcag
agttttccagtccctccttgtttccctcctgctcctccaccagtcccaaatcccagtaat
tccccagtaccaggggcccctactggacaaaacacttttccctatatgatgccacctcct
gcaatgcctcatcctccaccaccaccggtgatgccgcagcaagttaattatcaacctgtc
tactctacgggctattctcagcagtctttcccacctcctaattttaatagttatcaacag
aactcaaactcctttcagagcagcagcagtagcagtcattttcggcacgcaagccaatat
caggtagaaaaggcccaaagtgaacgaaggtctccagagaggagtaagcactacgatgag
caccggcaccgcgaacatagtcacgtgcacggggacagacaccggcccagtaaccatggg
gatcggcggggggatcgaggcaggagtcctgacaggagaaggcaagaaagcagtcggcac
aggtcagattatgacagaggaaggactccacctcgccacagaagttatgaacgaagcagg
gaacgggagagggaaagacataggcatcgtgatagccgaagatcgccatcttcagagagg
tcctacagaaaagattacaaaagaacagggagccgatcccccagccgggagagaaagaga
cctcgatgggaggaggagagagagaggtggtcagagaatcagagtgccagtaaagagaag
aattacactgctattaaagacaaagagccagaggagatcatttctgaaaaaaatgaagag
gaagaggaagaattgctcaagcctgtatgggttcgttgtacccattcagaaagttactat
tcaaatgaccctatggatcaagtgggggactccacggtggttggaacaagtcggctccga
gatttgtatgaaaggttcgaggaggagttaggaaagcgacaagcaaaagccaaagcagcc
cggccaccatgggagccaccaaagaccaaactcgatgaggatttagagagctccagtgag
tccgactgtgactcggatgacaatagcacctgttctagcagttcagattctgaagtgttt
gacgttattgcggaaattaagcgtaaaaaagctcaccctgatcgtcttcatgaggagctc
tggtacaatgaccccggacagatgaatgatgggccactgtgcaaatgcagtgctaaagcc
agacgaacaggaataagacacagcatttatcctggtgaagagcctattaagccatgccgc
cccatgaccaacaatgctggaagactgtaccactatcgaattacagtgtcacctcccaca
aacttcttaacagacaggccaactgttatagaatatgatgaccacgagtatatttttgaa
gggttttccatgtttgcacatgctccactgacaaatattcctctatgtaaagtaatcaga
tttaacattgactatactattcatttcattgaagagatgatgcctgagaatttttgtgtg
agaggacttgaattattctctttgtatctattcagagatattttggaactctatgactgg
aatcttataggtccttcatttgaaaacaattcttgttgtccaagatttcatttcatgcca
cggtttgtgaggtttcttccagatggagggaaagaagtgctgtcaatgcatcagatccta
ctctatttgttacgatgcaacaaacctttagtcccagaggaggagattgccaatatgctt
cagtgggaagagctggaatggcagaaatatgcagaagaatgcaaaggaatgatcgttacc
agtcctggcatgaaacccagttcagttcgtattgatcaactggaccgtgagcagttcaac
cctgatgtaattactttccccattattgttcacttcgggatacggcctgctcaactcagt
tatgctggagaccctcagtaccaaaagctatggaagagctatgtgaagctgcgccatctg
ctggctaacagtcccaaagtcaaacaggctgataaacagaagttatcccagagagaggaa
gcgctacagaaaatcaggcagaaaaacacaatgagacgagaagtgaccgtggagttaagc
agccaaggattctggaaaaccggcattcgttctgatgtctgccagcatgcaatgatgctt
cctgttctcacccaccatattcgctaccatcaatgtctgatgcatttggacaagttgata
ggctacacttttcaagatcggtgcttgctacagcttgccatgactcatccaagccatcac
ctaaacttcggaatgaatccggaccacgcaagaaattccttgtccaattgtgggattcga
cagcccaagtatggagaccgaaaagtccatcacatgcacatgagaaaaaagggaataaac
accttgataaacattatgtcccgccttgggcaagatgatcctactccttccaggattaac
cacaatgaacgtttagaatttttgggagatgctgtggtggaatttttaactagcgtccat
ttgtactacctgtttccaagcctagaggaaggggggttagctacatatcgcactgccatt
gttcagaaccagcatcttgctatgctggccaagaaactggaactggatcggtttatgctt
tatgctcatggacctgacctttgtagggaatcggatctacgtcatgcgatggccaactgt
tttgaagccttaataggagctgtttacctggagggaagcctagaagaagccaaacactta
tttggacgtttactctttaatgacacggacctacaggaagtatggcttaattacccacta
cacccactccaactgcaagaatctaacactgatcggcaacttatcgagacttccccagtt
ctccagaaacttaccgagtttgaggaagcaattggagtcatttttactcatgttcgactt
ttggcgcgggccttcactttgagaactgtgggatttaaccacctgactctaggccacaat
cagaggatggaattcctgggtgactccataatgcaattggtagccactgagtacttattc
attcatttccctgatcatcacgaagggcacttaacgttgttgcgaagctcattggtgaac
aacaggacacaggccaaagtagcagaagagctgggtatgcaggaatttgccatcactaac
gacaagacgaagagacctgtggctcttcggactaagactttggctgatctcttggagtct
tttattgctgcactttacattgataaggatttggagtatgttcacactttcatgaacgtg
tgcttttttccacgattaaaggaattcattttaaatcaggattggaatgaccctaaatcc
cagcttcagcaatgctgcctgactctcaggacggaaggaaaagagccagacattcctctg
tacaagaccctgcagacagtgggaccttctcatgccagaacatatacagtcgctgtttat
ttcaaaggggaaagaataggatgtggtaaaggtccaagtattcaacaagcagaaatggga
gctgctatggatgcgcttgaaaaatataactttccccagatggcccatcagaaacggttc
attgaacggaaatacagacaagagttgaaagaaatgaggtgggaaagagagcatcaagag
agagagccagaggagaccgaagaagtaaggaaataa
DBGET
integrated database retrieval system
